publication
For those who utilize our genome and transcriptome data, please cite:
Oleg Simakov*, Takeshi Kawashima*, Ferdinand Marletaz, Jerry Jenkins, Ryo Koyanagi, Therese Mitros, Kanako Hisata, Jessen Bredeson, Eiichi Shoguchi, Fuki Gyoja, Jia-Xing Yue, Robert Freeman, Akane Sasaki, Tomoe Hikosaka-Katayama, Atsuko Sato, Manabu Fujie, Kenneth W. Baughman, Judith Levine, Paul Gonzalez, Christopher Cameron, Jens Fritzenwanker, Ariel Pani, Hiroki Goto, Miyuki Kanda, Nana Arakaki, Shinichi Yamasaki, Jiaxin Qu, Andrew Cree, Yan Ding, Huyen H. Dinh, Shannon Dugan, Michael Holder, Shalini N. Jhangiani, Christie L. Kovar, Sandra L. Lee, Lora R. Lewis, Donna Morton, Lynne V. Nazareth, Geoffrey Okwuonu, Jireh Santibanez, Rui Chen, Stephen Richards, Donna M. Muzny, Leonid Peshkin, Michael Wu, Tom Humphreys, Yi-Hsien Su, Nicholas Putnam, Jeremy Schmutz, Asao Fujiyama, Jr-Kai Yu, Kunifumi Tagawa, Kim C Worley, Richard A. Gibbs, Marc W. Kirschner, Christopher J Lowe, Noriyuki Satoh, Daniel S Rokhsar, John Gerhart
Two hemichordate genomes illuminate the ancestry and diversification of deuterostomes
Nature. 527:459-65. doi: 10.1038/nature16150.
Two hemichordate genomes illuminate the ancestry and diversification of deuterostomes
Nature. 527:459-65. doi: 10.1038/nature16150.
Annotation Files
| pfl_public_ver1.0.gff3 | Created from the assembly version 1.014 |
| pfl_public_ver1.0.mrna | Created from the assembly version 1.014 |
| pfl_public_ver1.0.prot | Created from the assembly version 1.014 |
Assembly
| pfl_scaffold_ver1.0.14.fasta.gz | |
| pfl_scaffold_ver1.0.14.masked.fasta.gz |
Raw data
| DDBJ BioProject: PRJDB3182 | |
| NCBI BioProject: PRJDB3182 |
Transcriptome data
| pfl.clst.v3.fasta.gz | Tagawa K, Arimoto A, Sasaki A, Izumi M, Humphreys T, Fujiyama A, Kagoshima H, Shin-I T, Kohara Y, Satoh N, Kawashima T. A cDNA resource for gene expression studies of a hemichordate, Ptychodera flava. Zool. Sci., 31(7):414-20. (2014) |
| acornworm_est.gff.gz |