Gene
| Gene Model ID | ahya_s0011.g123 |
|---|---|
| Locus | sc0000011 : 3042535 ... 3053963 : - |
| To GenomeBrowser | sc0000011:3042535..3053963 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g123.t1 | 1 | 1 | RhoGAP | 22 | 171 | 0.0 | 167.9 | 0.0 | 0.0 | 166.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g123.t1 | SUPERFAMILY | 1 | 199 | IPR008936 | Rho GTPase activation protein | GO:0007165 | |
| ahya_s0011.g123.t1 | PANTHER | 1 | 220 | ||||
| ahya_s0011.g123.t1 | Gene3D | 1 | 212 | IPR008936 | Rho GTPase activation protein | GO:0007165 | |
| ahya_s0011.g123.t1 | PANTHER | 1 | 220 | ||||
| ahya_s0011.g123.t1 | ProSiteProfiles | 4 | 199 | IPR000198 | Rho GTPase-activating prote... | GO:0007165 | Reactome: R-HSA-194840 |
| ahya_s0011.g123.t1 | SMART | 19 | 196 | IPR000198 | Rho GTPase-activating prote... | GO:0007165 | Reactome: R-HSA-194840 |
| ahya_s0011.g123.t1 | Pfam | 22 | 171 | IPR000198 | Rho GTPase-activating prote... | GO:0007165 | Reactome: R-HSA-194840 |
| ahya_s0011.g123.t1 | Gene3D | 240 | 322 | ||||
| ahya_s0011.g123.t1 | Coils | 249 | 318 | ||||
| ahya_s0011.g123.t1 | PANTHER | 255 | 321 | ||||
| ahya_s0011.g123.t1 | PANTHER | 255 | 321 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g123.t1 | sp|Q5U2Z7|RHG24_RAT | Rho GTPase-activating protein 24 | 0.0 |
| ahya_s0011.g123.t1 | sp|Q8BL80|RHG22_MOUSE | Rho GTPase-activating protein 22 | 0.0 |
| ahya_s0011.g123.t1 | sp|Q7Z5H3|RHG22_HUMAN | Rho GTPase-activating protein 22 | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g123.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g123.t1 caggtcgacgaagcaattgaaaaggtcattgccgagaatagatcagaatagactgtgtttggacaaatcctgcacttttt caaaaatattttacatgtttgggttaatgtcgtgtaaatatcaccggaaatttaagaagacactcatctagatctggtat taaagttagttcccagtgtcatgccgtgtagcgccaagatggaggcgtttcgacaacggttgttcagtttgttatgatat aagtgaaatttggagtgtttcgttgatatcgacggcatatcatgcagaaacaaccaataccacccgttagagggcacaag cagaaaattgaacattgcggttggcttcggaaacagggaggcagacacagaagtttaaggtcaagatggtttgaaatcaa gggagatcaattgtattactatagagataacaatgaacccaagacaccaattgcttcaattcctttgccaggaaatgaag ttattaaacatccaattgaacgtggtgatacaggaaaattcaagtttgaaattgtttctggaaaagacaaagtcgggcgg ccagtctctagccatcatgagacttttctcttgatagcttcatctcaaagagaaatggaggaatggatacgtgctataaa cagaataatctatgctcctgtgggtgggggaatgtttggtcgaagcttggcagagaccgtcaagtttgaaaaaaggcgtg gtggaggatgtgtgcctctcattgttcacaaatgtgtagattttattatagcacatgggttaaaagaggaaggattattc aggttgccaggacatgtagaaaaagttgcaagtttgaaggatgctttcaacaaaggaaaaaatccagagcttgaaagtac tagaactgaggttcactctgttgcatctgtgctcaaatcatacttcagagaacttccagagcctctcataccatatgact attttgaagtattccttacagctgctagatgttatgaaatgcgagaagaggatggcattattgcagtacagaatcagcta aaaacgcttccacaaccaaactacagtcttttaagattcttgtgtcgtttcttacacgaagttcaaaagcactgcgaaca aaacaagatgaatgcgagaaacctggccatggtgtttggaccgaatattctgcgctcagggtctgaggatccgaaagtaa tgatggagagtacaaaccttgtgacggaacttatcagcatattgattcgaaaacatgaactgcttttccctcaaacagat gaggaagatgttgcagcccagagacataatgcagggaatgatgcggtgaacctgaatgcgtttgaaattagtgccgagta ctctcggaaattggtgccactcgcatcccccgagggcgaacaagaagatgacgctgttgaagatccgcgggttcagattg aagaattggagaatgaattagagcttcaacaacagcagataaaagatctgcagacaaaactggaacaagaagggaaagtt cgtgaaatgttagcaatgcggttagcagacgagcaaagagcgagagagtcagctcaagatcggttggaaaaactacaagc cgccatggaggagttttgtgatcgatatggtaactgggaacctactcaaagatgaaacctacattggttgagttccggta tagataacaattgagactttattatttaaggcgttaacatggagttgattgccgcgaaacaatagctctttttaaactat ggtttacgtacttttcgtttttgcctaaatctgaaacgctcaagtgactagtactcgtgaatttgtaactggtacgcgag agcaaattttactt |
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Protein
| Protein ID | ahya_s0011.g123.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g123.t1 MFGRSLAETVKFEKRRGGGCVPLIVHKCVDFIIAHGLKEEGLFRLPGHVEKVASLKDAFNKGKNPELESTRTEVHSVASV LKSYFRELPEPLIPYDYFEVFLTAARCYEMREEDGIIAVQNQLKTLPQPNYSLLRFLCRFLHEVQKHCEQNKMNARNLAM VFGPNILRSGSEDPKVMMESTNLVTELISILIRKHELLFPQTDEEDVAAQRHNAGNDAVNLNAFEISAEYSRKLVPLASP EGEQEDDAVEDPRVQIEELENELELQQQQIKDLQTKLEQEGKVREMLAMRLADEQRARESAQDRLEKLQAAMEEFCDRYG NWEPTQR |
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