Gene
| Gene Model ID | ahya_s0011.g150 |
|---|---|
| Locus | sc0000011 : 3437203 ... 3457523 : - |
| To GenomeBrowser | sc0000011:3437203..3457523 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g150.t1 | 2 | 1 | WD40_4 | 66 | 106 | 2.2e-37 | 126.5 | 3.8e-22 | 1.6e-18 | 66.2 |
| ahya_s0011.g150.t1 | 1 | 1 | DUF1899 | 181 | 245 | 7.3e-16 | 57.7 | 4.2e-19 | 1.7e-15 | 56.5 |
| ahya_s0011.g150.t1 | 1 | 1 | WD40 | 343 | 378 | 1.5e-07 | 31.8 | 5.2e-07 | 0.0021 | 18.7 |
| ahya_s0011.g150.t1 | 2 | 2 | WD40_4 | 522 | 564 | 2.2e-37 | 126.5 | 5.6e-20 | 2.3e-16 | 59.3 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g150.t1 | PANTHER | 1 | 119 | IPR015505 | Coronin | ||
| ahya_s0011.g150.t1 | PANTHER | 1 | 119 | IPR027331 | Coronin 7 | GO:0005794 | |
| ahya_s0011.g150.t1 | SMART | 1 | 114 | ||||
| ahya_s0011.g150.t1 | Pfam | 66 | 106 | ||||
| ahya_s0011.g150.t1 | MobiDBLite | 112 | 169 | ||||
| ahya_s0011.g150.t1 | Gene3D | 114 | 592 | IPR015943 | WD40/YVTN repeat-like-conta... | GO:0005515 | |
| ahya_s0011.g150.t1 | PANTHER | 122 | 640 | IPR027331 | Coronin 7 | GO:0005794 | |
| ahya_s0011.g150.t1 | PANTHER | 122 | 640 | IPR015505 | Coronin | ||
| ahya_s0011.g150.t1 | SMART | 179 | 244 | IPR015048 | Domain of unknown function ... | ||
| ahya_s0011.g150.t1 | Pfam | 181 | 245 | IPR015048 | Domain of unknown function ... | ||
| ahya_s0011.g150.t1 | SMART | 247 | 286 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | SUPERFAMILY | 252 | 472 | IPR036322 | WD40-repeat-containing doma... | GO:0005515 | |
| ahya_s0011.g150.t1 | SMART | 296 | 336 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | ProSiteProfiles | 303 | 387 | IPR017986 | WD40-repeat-containing domain | GO:0005515 | |
| ahya_s0011.g150.t1 | ProSiteProfiles | 303 | 345 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | ProSitePatterns | 323 | 337 | IPR019775 | WD40 repeat, conserved site | ||
| ahya_s0011.g150.t1 | SMART | 339 | 378 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | Pfam | 343 | 378 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | ProSiteProfiles | 346 | 378 | IPR001680 | WD40 repeat | GO:0005515 | |
| ahya_s0011.g150.t1 | SMART | 434 | 570 | ||||
| ahya_s0011.g150.t1 | Pfam | 522 | 564 | ||||
| ahya_s0011.g150.t1 | MobiDBLite | 566 | 641 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g150.t1 | sp|O35828|CORO7_RAT | Coronin-7 | 0.0 |
| ahya_s0011.g150.t1 | sp|Q0V8F1|CORO7_BOVIN | Coronin-7 | 0.0 |
| ahya_s0011.g150.t1 | sp|P57737|CORO7_HUMAN | Coronin-7 | 0.0 |
| ahya_s0011.g150.t1 | sp|Q9D2V7|CORO7_MOUSE | Coronin-7 | 0.0 |
| ahya_s0011.g150.t1 | sp|Q5RBW3|CORO7_PONAB | Coronin-7 | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g150.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g150.t1 cgcgtaaacgatctttggaggaagtcagtgccgtatagctttgcaagttttaaggatgaagcgatttcaagcgtccaaat atcggaatgcagctccaaagattccaaaaaaggaggaatatatctctggtatcagagttggagatcttaaaagttgtttt ggaaatcacataaaagcaagtgataagttcatgacattcaatgtggagtttggagggggaagtcttggtgttcttccact tggagatgttggcaggaaagatcattttctacccacacttcatgcacactcagattttgtaactgacatggacttttcac cctttgatggaagaattctagcaactggttcctatgattgttcaataaaactgtggaaaattccagatgaaggaataaat caagaattatcctcaacactttgcaaacttccatcacagcctggtcgtgtggaaaatgttcttttccatccatcagctag cgaagtattgggtagctcctgtgggacgtctcttactgtatgggatttacagaagcagcagtcgaaatacaatttggaca gtcatggtgacatagttcagagtttctgttggaagggagatggttccttgtcagctacttctagtaaggacaaaaagata aggattttagatccacgatgttcttctattgttgggctatgtatttcagatgggcaaatgttgatatgttctctaaatta gcataagaaaaaggatgtttgtagttaaaaagtgctgtgactaaaaggattgcacttttattggatgtactgcaatacat agtgattattaatttcccatttaattaatgttattgggaccctttgcagaaatgtgatggcttttcaggacttattgact caagaatactatggctgggaagcaccgacagaattcttggttctggttttaatgctgctcaccatcgtgaagttatagtc tgggatgttcacaacttggccaaaccgatacagacattgagatttgatacctcatctgcaggaatcttgatgccattttt tgacccagacaccaacatgttgtttctggcagggaagggtgactcatttattcattaccttgaggcatcttctagtgctg catctttccttacacaaaattccacacagatatttgatgaacagcataaaggaatggccattgttcctaagctcgcaatg gatgtaatgtcaggtgaagtggtgcgactccttcaactcaccaagtccactgtggtacctcttagttactgtgtgcctcg caggtcttacaaggattttcatgcggatctttttcctgacactgtggccagagaagcttccatgactgctgaagaatggt tcagtggctctaatatccctatgaaaaaagtgtctctgaacccaatgaactcaaagacacagaccaaacagcagccaccc aaagtcatgccacaaaaaagcgatgtaactaaagagaagcctgatttacaagcccagacagcaagtgcatctaaagacaa gacagctagccagtccatttcagccggtgactctacgattgaatcaccagcaaaacctattaaggcattcacaggtgtcc gtacatcaaaatttagacacctttatggtacacccatgcacaaaagcaacaatatagagaatgtgcgtaacttgagtata tctttaccgggagacagtgatggatttcaagttaatcgagactttgtggcatatccactgtcaggacctggtggacagat agcagttgtttcacttacaaacccatgcagactgccagatgcaggaatgcccacaattcagtgtgggagtagcataatgg acttcactatggatccactcaataaacaaaaaattgctgttgcttgtgaaaatggctttgttagtgtatgggaaatacca gatggtgggctaactgagaacattgatactccatctgtgttgttaaaaggtcaccaggataaaccaaatgtagtgaggta ccaccctacagccagtggggtgcttgcatcagctgccttggatttaacagtcaaaatctgggacataaacagtgctaaag ctttgataactcttgcaggtcacacggagcagatatttagcttgagctggaaatctgatggaacacagctagcttctctt tcaagagaccacaaagtcagattgtatgatccaagattgaaggtgtctccactacagacaggccctggacctgtaggaag ccgtggagctcgtgttgtttggggtggaccaagtggtaattggttgattgtcacaggatttggcagaatgagcacccgca tcatcagtgtgtatgacagtcgtaacttgtctgaaactttgtcaactttggaaattaatatagccccttctgtgttaatc cccttttatgatgaagactctgctgtcctctttctttcatccaagggtgaaacaacagtttttgcctttgaaattgctga agaagcacctcatatatttgaactgtctcactatagggtgaaagaaccctaccaggctgtgggtttcctgccaaagactg tctgtgatatcaagaaagtagagtttgccagagcagtcaagctgaataagacatccatagatttaatcaccttccaggtt cctcgtgtaaagatggaatattttcaagacgacttatttcctccctcaagagcatggtgggagcctgcattgactagcag tcagtggtttgcaggtgaaaatggccagcaaaagaagttgtccctcaagccagcagacatgaagccattgagcgaagcac ccaaaagggagcccattgctagaaaatacgatagcagacatgagttggatgatgccaagacgacagatgaacaaaaagaa gagctaataagctccatggttgaaaaattgaggagttacgacgaggaacctcttccacaggacttacatgaaggagtaga tgatgatgaatgggatgactgatgcagaatgctggagatgtttttcagagacatgcagttgtacctgaataataatctca ttacatttagttttactttatttttaaatgtacatagaaatttgaatatgttaaaaattgcaccttttgaaaaacgttgg gacatggggcaaactttttaaagaatttattagacatcagtgataaaagaaaacaatattattgaatttactcactttta aagtaattttgcaacagtgccacaaatttgctgattagttgtagatgttatgggtggtactgagttcatcattaataaaa gaattaatttttt |
|
Protein
| Protein ID | ahya_s0011.g150.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g150.t1 MLFLAGKGDSFIHYLEASSSAASFLTQNSTQIFDEQHKGMAIVPKLAMDVMSGEVVRLLQLTKSTVVPLSYCVPRRSYKD FHADLFPDTVAREASMTAEEWFSGSNIPMKKVSLNPMNSKTQTKQQPPKVMPQKSDVTKEKPDLQAQTASASKDKTASQS ISAGDSTIESPAKPIKAFTGVRTSKFRHLYGTPMHKSNNIENVRNLSISLPGDSDGFQVNRDFVAYPLSGPGGQIAVVSL TNPCRLPDAGMPTIQCGSSIMDFTMDPLNKQKIAVACENGFVSVWEIPDGGLTENIDTPSVLLKGHQDKPNVVRYHPTAS GVLASAALDLTVKIWDINSAKALITLAGHTEQIFSLSWKSDGTQLASLSRDHKVRLYDPRLKVSPLQTGPGPVGSRGARV VWGGPSGNWLIVTGFGRMSTRIISVYDSRNLSETLSTLEINIAPSVLIPFYDEDSAVLFLSSKGETTVFAFEIAEEAPHI FELSHYRVKEPYQAVGFLPKTVCDIKKVEFARAVKLNKTSIDLITFQVPRVKMEYFQDDLFPPSRAWWEPALTSSQWFAG ENGQQKKLSLKPADMKPLSEAPKREPIARKYDSRHELDDAKTTDEQKEELISSMVEKLRSYDEEPLPQDLHEGVDDDEWD D |
|