Gene
| Gene Model ID | ahya_s0011.g152 |
|---|---|
| Locus | sc0000011 : 3490629 ... 3494740 : - |
| To GenomeBrowser | sc0000011:3490629..3494740 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g152.t1 | 1 | 1 | zf-SAP30 | 45 | 114 | 6.5e-38 | 128.5 | 1.99993e-41 | 6.5e-38 | 128.5 |
| ahya_s0011.g152.t1 | 1 | 1 | SAP30_Sin3_bdg | 126 | 178 | 4.4e-23 | 81.2 | 2.6e-26 | 8.6e-23 | 80.3 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g152.t1 | PANTHER | 32 | 190 | ||||
| ahya_s0011.g152.t1 | PANTHER | 32 | 190 | IPR024145 | Histone deacetylase complex... | Reactome: R-HSA-3214815|Reactome: R-HSA-427413 | |
| ahya_s0011.g152.t1 | Pfam | 45 | 114 | IPR025717 | Histone deacetylase complex... | Reactome: R-HSA-3214815|Reactome: R-HSA-427413 | |
| ahya_s0011.g152.t1 | Pfam | 126 | 178 | IPR025718 | Histone deacetylase complex... | GO:0005515 | Reactome: R-HSA-3214815|Reactome: R-HSA-427413 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g152.t1 | sp|Q6NYV5|SP30L_DANRE | Histone deacetylase complex subunit SAP30L | 0.0 |
| ahya_s0011.g152.t1 | sp|A4FVD8|S30LA_XENLA | Histone deacetylase complex subunit SAP30L-A | 0.0 |
| ahya_s0011.g152.t1 | sp|Q28H91|SP30L_XENTR | Histone deacetylase complex subunit SAP30L | 0.0 |
| ahya_s0011.g152.t1 | sp|Q2TAD4|S30LB_XENLA | Histone deacetylase complex subunit SAP30L-B | 0.0 |
| ahya_s0011.g152.t1 | sp|Q9HAJ7|SP30L_HUMAN | Histone deacetylase complex subunit SAP30L | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g152.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g152.t1 gtcgttcatccatgtgacatgacgtcatacacatgggtacaacaaacaggaaaggagcgattttcaagatcggcggccaa cgtatatcaatcgagcaagctagagatgaacggatatcgtagcgaacaggaggaagcgagttcttctgttaggcagattt gctgcctggtagaagacggtgaacgctgtaaacgacaggctggtaacgcgagctattcgaagcgaattcaaaagacagtt tctcagagaaaactcaagttgtctttggatgtgaacgcgagacacatctacatatgcgaacatcacaaaaatatgattca aagtgttcgcagcaagagaaagcgcaaagattcagatgatgaaactgagatgactgaagtcgatttctgtcagcttcaag ttaacacgttaaggcgatataaacgacattataaactgcaaaccaggcctggactgaataaatcgcaacttgttgagagt attcagaaacacttcaagatgatcccatgtccagaaaaggaaactttggcatattttatttacatgatcaaaactcataa aagcaagcttgaccaaaagcctgacagcaattgaagcagccatatttttatcagaatctttggatataaaagtgtggact ttgaaaataatgtttttagtttgtaaatatgctttaaggttgtactgtagcacaaaatctgtctggaagttctccagttt tgagatgtttgaatgtgaacacacaccattgacaacaaggaatgaaattgaaaaaatcttgtaatcttggcttttagaag tggacctcctaatttgatagaaaaattgctaataattgaaatagtgaagttatcttgcctttctcttactctccccccct aaaagaagcacaacaaacattgattattgtgatggcaagtcaatggctgaggagtaagttttgtcctggtgatcagagaa actctttagttcttgtgattatgaaacattgtgacaatgtaccaatgaccaacataaagtgtagctgtatagttagttga aaagacaaaacatgacggcatggtactattttactcgtcagtttttgtgtcctctatgtcaaaagatggaattacagctt tttagtcatgtttacagtgttgataatcttctcagagacaagtaattttattatttcattgactgtttaattaagtatgt cataaatgcccattgtgagctgaagtgcataagggtgttccctttccttctcttcttcaacatcacattaattttagttt atgctgaaatactggttatgaatattgcaaagtgtattgtgagctccatttctcttgtaaacagaaacaactgtgacaac caaaacccaaaagcaaatgttgcaattagctaattgcttgtgaaactttggattaattttatcatatttaagcctgtatt ttaatttatatgtttctgttcccaaagagtggctcatattgctaaatcagctgtgtatgaagagatgggaggtcctttag ggttttttttcccctacctatgccccctccatcaaaaaccatcttgtaaaaagattagggcgaccttgagatgttgtaat aaagttattacaaattattttaaaaaatccatgaatatcgcaacttttttgtctgcaactagcccacttccaccttccca cccagactcccaaaatgtcatttggctgtggttagtggtttagaactggggtttggagcagtctgccgaaacacagatgc agtatcttcggcatgaaattttacaggaaagcaaaccgtagacatttctcagagctatttgatgtcttggaaaccgaaga gggcaattcgtcaggtaaggtacacctgcattcatccaaatatttatattttctcagctgatcatgtcacagcaaacctc gctaaatattgaccgcaatccatttagtcaaacaaacatgacgtacagtacgtccctcatgtgctctttctgtggctgta agttgctattttttcaaaaggaggcaccttgagtctgttaaaataaaggtagtttgattgt |
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Protein
| Protein ID | ahya_s0011.g152.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g152.t1 MTSYTWVQQTGKERFSRSAANVYQSSKLEMNGYRSEQEEASSSVRQICCLVEDGERCKRQAGNASYSKRIQKTVSQRKLK LSLDVNARHIYICEHHKNMIQSVRSKRKRKDSDDETEMTEVDFCQLQVNTLRRYKRHYKLQTRPGLNKSQLVESIQKHFK MIPCPEKETLAYFIYMIKTHKSKLDQKPDSN |
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