Gene
| Gene Model ID | ahya_s0011.g157 |
|---|---|
| Locus | sc0000011 : 3520381 ... 3522360 : + |
| To GenomeBrowser | sc0000011:3520381..3522360 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g157.t1 | 1 | 1 | DUF4538 | 5 | 58 | 3.0e-22 | 78.0 | 2.0e-26 | 3.3e-22 | 77.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g157.t1 | PANTHER | 1 | 67 | IPR027917 | Small integral membrane pro... | GO:0016021|GO:0033617 | |
| ahya_s0011.g157.t1 | Pfam | 5 | 58 | IPR027917 | Small integral membrane pro... | GO:0016021|GO:0033617 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g157.t1 | sp|Q8N5G0|SMI20_HUMAN | Small integral membrane protein 20 | 4.0e-15 |
Transcript
| Transcript ID | ahya_s0011.g157.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g157.t1 cgaactaagcaaaatggcggtcatttgacgaatgattgccccagttgttaacaatatttcgagaataaaatgtctcacaa ggttaaaactggtgttttcatcgcgggatttacagcgctcacccttgcagcgttgtatcctattgtggtttatccaaaac tgcatccagaagtttacaaggatattcaaatggaaacaaggaaaagcatcaaacaagaggatatacaacctggaaatatg aaggtttggtctgacccattctccagaaaataattacaaagatggtggagatgaagcatatgatcactaaactaattatt ggttgttgcttggagggttatgaaaaccaaaaagatcaaagcagtcaagaaaaaagaaaccaggactggacttaacactg aacctgctatttctgcactttattgtagacaaaaaaaaataatagtattaagaaaaatgaacaatttctaattga |
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Protein
| Protein ID | ahya_s0011.g157.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g157.t1 MSHKVKTGVFIAGFTALTLAALYPIVVYPKLHPEVYKDIQMETRKSIKQEDIQPGNMKVWSDPFSRK |
|