Gene
| Gene Model ID | ahya_s0011.g161 |
|---|---|
| Locus | sc0000011 : 3544852 ... 3557560 : - |
| To GenomeBrowser | sc0000011:3544852..3557560 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g161.t1 | 1 | 1 | BTB | 57 | 167 | 1.7e-15 | 57.1 | 4.7e-19 | 3.8e-15 | 55.9 |
| ahya_s0011.g161.t1 | 1 | 1 | Slx4 | 1247 | 1302 | 6.3e-13 | 48.4 | 1.8e-16 | 1.5e-12 | 47.2 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g161.t1 | PANTHER | 2 | 1319 | ||||
| ahya_s0011.g161.t1 | Gene3D | 33 | 171 | ||||
| ahya_s0011.g161.t1 | SUPERFAMILY | 45 | 166 | IPR011333 | SKP1/BTB/POZ domain superfa... | ||
| ahya_s0011.g161.t1 | Pfam | 56 | 167 | IPR000210 | BTB/POZ domain | GO:0005515 | |
| ahya_s0011.g161.t1 | ProSiteProfiles | 64 | 142 | IPR000210 | BTB/POZ domain | GO:0005515 | |
| ahya_s0011.g161.t1 | SMART | 64 | 173 | IPR000210 | BTB/POZ domain | GO:0005515 | |
| ahya_s0011.g161.t1 | MobiDBLite | 589 | 652 | ||||
| ahya_s0011.g161.t1 | MobiDBLite | 665 | 735 | ||||
| ahya_s0011.g161.t1 | MobiDBLite | 976 | 1000 | ||||
| ahya_s0011.g161.t1 | MobiDBLite | 1095 | 1131 | ||||
| ahya_s0011.g161.t1 | Pfam | 1247 | 1302 | IPR018574 | Structure-specific endonucl... | GO:0005634|GO:0006260|GO:00... | Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g161.t1 | sp|Q6P1D7|SLX4_MOUSE | Structure-specific endonuclease subunit SLX4 | 6.0e-29 |
| ahya_s0011.g161.t1 | sp|Q8IY92|SLX4_HUMAN | Structure-specific endonuclease subunit SLX4 | 3.0e-13 |
| ahya_s0011.g161.t1 | sp|Q9VS48|SLX4_DROME | Structure-specific endonuclease subunit SLX4 | 1.0e-07 |
Transcript
| Transcript ID | ahya_s0011.g161.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g161.t1 nnnnnnnnnnnngcctccattgttgctgcgagataatgaaagtgctcaaagagctgtggcgctaagagcagcacaagtgc tttgtacaaaagacaatgaagatgatgatgaggatgaaatttcatgtacaccttctcttgcaccaagccgatttgttcag aataacctagcctgcccagctgttctttctgtttgtaacttggaaaattttgatagcacgcggacatcagctgaaaagga agatgttgataatggtcctaaagaagccgtgaaaattgatgaaggaggaaattgcaccaatgaaacttgtgagagcagtt tcacagttgaccctgagtttagcaagtcatttctaaattctctgtacagtgcagaaattgaagaagactcagatgtcgta accaaggttccccgtcccagtccactgtggtcattagctggtctcgtggaaccaccttcttttacatatgttgtcccagg ccttcttccaccactttcaccccaaaaaggaaagaatcttcttgaacagtcaccgggttcagaatcaagggaaataagtg ctgctatcaagtgtgataatgccaaaaccaaccaggggggaaatcttgaagaaaccaaagagctgggcaaatctactctg cagcatcaaacaattacaactactactgaaaagtgtgcagagatcacaccatcacaagttgtcgatatggaaattctctt agagcttgctcaagaagatgaaaaatcaaatgtctctcttgattcacaacatgtcataccaaccagtggcttttgtattg accgccaagtcaaagtggaggaagttgatattgtccctagtggagttccagaactgctgcaggatttatcttcaatgatt aacaactcatttttaagtgatgtcatgattaaacttcaaaatggtcaagaaatggtagcacacagctttattttagctct taggtctgaggtgctagcgcagttgctgacagagcaaagagctgtttgtgaggggacaacatgcaatggatcatggacag gaaaattttgtctgttgtttgaggatgtaaataaagacgtatttgaacctgtacttaggcacatctacacaggagatgtc agcatgttaaacaggaatgatttggatgagatagcaaagttagctgaaagattaagacttccttgtctcttgaagacgtg caaagcaactcgggaaaagctgagacgttcttttaggagtgatcagggcgatgggatggcagactttgccaccacacagt tggacaagcttgaggaaaatctctggagagacaagaccatcaacgagttaagcgacgaacgtgaagccagtgcaaataag ttggatgaaggtgattttttgaacgatgatgatattgaggagattatgatttttcagacgcaatcgcttcgcgggaaagg cagtttagagtggggaaatgtagaacaaaggcagtcgtgctctcatgaaaagaactttgacaatggagaattgttcgcgc cgggtgttaacaggaatcgtggattacaaaaagaggccgagtacaacaatctagaagtcaagaatgaaagttccatgaaa gaaaatgcgctggtgctacccaatcttatggaaggtcttaattcgtcacgtgacattgttttggtcaatggtgcccagag aggaaatatatctagcaagctcgatgcctctgtcaacttatcgcacagtaatattgcaacagttaatgagaaagtggatg cggttgaaaatacgaataacatccgtggccgtaatgagaggaaagaaatgaccgttagcttgagtacagttcatggaaag gaatatattgaggaagaccgagtgatagccgagaataaattgcgtggagaaatgtctcctagggccaaagacatttctag gatgtcagactttgaaaatacagaatatgaatttaatgggagacatcgcatgtttacaggtgatgatggtcagttgtcac ctgatatcagcaaatcagtcattgatatcgaggccttgccttgtaatagctcaagaagtaatgataaggcaatttcgaca gggagtcgattagagacaaaagcgaagatggagtgtttttctttcaatgaagtaccgtcccacagaaatgacgaggctgg aataggcaatgaaccagaaaacgagcccattgttatcaacttgccaatagatttatccagtgaaaatgttcaaggtgtga atggcgacagactactcgaagcggacgaaaagcgggaagctttctctgcttttacgtcccttgcaaaccaagagcacagt tctcaggtttggttatcagttttgcctgaggagggatgcgtggaatatactaataataacgggtcccctgaggaagcaac tcttctggaggatgacgaagtgggagaatcagcggtggatggatcaatcacactcatcagcgataatgatgacgaagagg cagtgaatgactcttctccagtgaagaaaaaccttaccatcgtaccggaaactcctcgcatttcaaggagcttacctcaa agcaagtcttcatccacagacacttacagcgaagagaatgacgtggatggtgataacgaagtaacttacacaggttcgtc gccttcaaagacacagaagaagttgagggatgaagccattgaatttttatctatgttgaaagaacgggttggaagtggca agggaaagaaaagcagaaataagaaatcttcgagaagagagtccgtcaaacgcgtttcaccagcaaagttgtcttctcaa tgtacagaggaaaaccaggagaggaagtcgccgctttctccaagagaatttcgatcccagggttcttcgcagttgggcca cttttctcggacgggtgacatctcaccgttggaagaacttccttgcgattttggaagttcgccgatatgggaaaacgatg acgagccagattgttttacagttgataagtctcctcctcgatcacctgttcatgtgcaaccgaatttggtcttagcagcc tcagaacctgaaagcaataaaaattgtagtgtttcaactccatgcaaccctacctttggtagaaataatagcggatatcg tggttgtgttagcacaagattgtcaacagcggatcttcagaattgtgttgatcatgaagtgttggatgtctgtgatgaca aaactgaagggaattttgacgctgcagctaccatttctactgttcaagatgttatgtcgccaccagtcccctcgccggac cttttacgtccgcgttctcctaccctgcctatttcccccttgcccccgagagttgtgttgtccccagacctcactgtcac aaattgcaagtctcctttacctggtgggtgtccacagtcagactcccccatgtctccttcggtttgttcatttagctcac aacagactgctcttggtgtacaaagtgaaaagagagagtgtgcgaagaaactggacctaaaacagggctcaaatagcaca gaaagtgtgaaacctagtatatcggaaacattcgatctgaacatacccctgatggaaaggattaaggcagcccgtaatgg caaaaaaatgtgcttgcttacaaatgttgaagaagacagcagcgataatagcattgatggtgattctattggagatgaaa atgattcaaaggacaaaaagtcgtcgatagatttacgcctccaagacgctggtaacgctgcttcaggtgaaatcagtgag atgaggaatgttaccacggttacagatttcgacttctatgatgatggtggttacaattttgatatcgatgagttcgacat tgttgacaattgtttagaaaatatcaacactgaagcaaacctggagagcggagaagggacatatttaaaagtgaccgaag tccttcgggggaataaaggtggaaagcaatttgttggaaagaagaagatcagtgcgagttatcggagtaacgatgagatt gagcgagcaagcgttccgaagaaacgaggaaaaaagatggacagtaagtcgcaccagacaccagcacccacagtcaatga accagtgacacccatgcctaactaccacgccatggacactcccaccttaaagaatgaactgcacaactttggtgtacgtc ctcttcccaagaaaaagatgattttgaagctgaaagaaatttatgattatactcacaaagtggaatcacctcatcaggaa actaaaaatgacccacatgctgttggtgttctgagatccaaaactgtgggttcttgtgacgttgacgaagtgtcaggcag tggaactgcgagcagcgatgaaagtggtgtggaaggggacacagagtttggagactgtactgttatgatcgaagatgagg cagtgtcagcatcacaacaggttaatggcgggaacctaaaagataagcttgtgggttatgtccaaagtaaccctgagatg tacaaaaagatgctgatgtttaagccaatggagttagtttctctccataaaaatttaaaacaagacggcatcagctgtgg actgggaaagcttgtagattttcttgatgagcagtgcattactttcacaacagctggatcaaatgcgcggacgacaaaaa ggcgcagaacaaaaaagaaacccgagaattaattacgaattgctcccgggaactgaaaagaaatgtaaagctactttgaa ttaagttgaactcgttttggttaagtccttatttattgttttaataaagtcatctttccacactgtagcctttgtgctgg gtgactcctttttgtgcgtatttttgcctttgtgaaatcgtaagagatttgacatcttttttctttttttttttgaccac aaaagcactcggacgcaaagttgcatgtcactgctcgcgtgcccgccgttatatgagaacgtatcctgccgcggacgcct gagtgtaaaatttcaaccaatacggaagaaagcgaggaataacaaagagaaagggatgacatagttaattgttcgttcac agcgggagtgatcttttgcaccataagttcttgttggagtaaaattttccccagctgttgtattccgagggtgttgagag ttctctaaaactcagaatttaatcattttgaaactttccgatctttgttttcgtactccaacgaggattgccagagaatt aaccaaggagacaaaccgcatatttagactccatttaattgcaatggccatcagcgaattagtcgtataatgaaaggaat tatgaagc |
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Protein
| Protein ID | ahya_s0011.g161.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g161.t1 MEILLELAQEDEKSNVSLDSQHVIPTSGFCIDRQVKVEEVDIVPSGVPELLQDLSSMINNSFLSDVMIKLQNGQEMVAHS FILALRSEVLAQLLTEQRAVCEGTTCNGSWTGKFCLLFEDVNKDVFEPVLRHIYTGDVSMLNRNDLDEIAKLAERLRLPC LLKTCKATREKLRRSFRSDQGDGMADFATTQLDKLEENLWRDKTINELSDEREASANKLDEGDFLNDDDIEEIMIFQTQS LRGKGSLEWGNVEQRQSCSHEKNFDNGELFAPGVNRNRGLQKEAEYNNLEVKNESSMKENALVLPNLMEGLNSSRDIVLV NGAQRGNISSKLDASVNLSHSNIATVNEKVDAVENTNNIRGRNERKEMTVSLSTVHGKEYIEEDRVIAENKLRGEMSPRA KDISRMSDFENTEYEFNGRHRMFTGDDGQLSPDISKSVIDIEALPCNSSRSNDKAISTGSRLETKAKMECFSFNEVPSHR NDEAGIGNEPENEPIVINLPIDLSSENVQGVNGDRLLEADEKREAFSAFTSLANQEHSSQVWLSVLPEEGCVEYTNNNGS PEEATLLEDDEVGESAVDGSITLISDNDDEEAVNDSSPVKKNLTIVPETPRISRSLPQSKSSSTDTYSEENDVDGDNEVT YTGSSPSKTQKKLRDEAIEFLSMLKERVGSGKGKKSRNKKSSRRESVKRVSPAKLSSQCTEENQERKSPLSPREFRSQGS SQLGHFSRTGDISPLEELPCDFGSSPIWENDDEPDCFTVDKSPPRSPVHVQPNLVLAASEPESNKNCSVSTPCNPTFGRN NSGYRGCVSTRLSTADLQNCVDHEVLDVCDDKTEGNFDAAATISTVQDVMSPPVPSPDLLRPRSPTLPISPLPPRVVLSP DLTVTNCKSPLPGGCPQSDSPMSPSVCSFSSQQTALGVQSEKRECAKKLDLKQGSNSTESVKPSISETFDLNIPLMERIK AARNGKKMCLLTNVEEDSSDNSIDGDSIGDENDSKDKKSSIDLRLQDAGNAASGEISEMRNVTTVTDFDFYDDGGYNFDI DEFDIVDNCLENINTEANLESGEGTYLKVTEVLRGNKGGKQFVGKKKISASYRSNDEIERASVPKKRGKKMDSKSHQTPA PTVNEPVTPMPNYHAMDTPTLKNELHNFGVRPLPKKKMILKLKEIYDYTHKVESPHQETKNDPHAVGVLRSKTVGSCDVD EVSGSGTASSDESGVEGDTEFGDCTVMIEDEAVSASQQVNGGNLKDKLVGYVQSNPEMYKKMLMFKPMELVSLHKNLKQD GISCGLGKLVDFLDEQCITFTTAGSNARTTKRRRTKKKPEN |
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