Gene
| Gene Model ID | ahya_s0011.g168 |
|---|---|
| Locus | sc0000011 : 3614271 ... 3623028 : + |
| To GenomeBrowser | sc0000011:3614271..3623028 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g168.t1 | 1 | 1 | UQ_con | 231 | 369 | 3.50325e-43 | 146.5 | 0.0 | 6.19374e-43 | 145.7 |
| ahya_s0011.g168.t1 | 1 | 1 | Prok-E2_B | 273 | 353 | 1.1e-06 | 28.2 | 1.5e-09 | 2.0e-06 | 27.4 |
| ahya_s0011.g168.t1 | 1 | 1 | UBA | 385 | 419 | 3.5e-07 | 29.8 | 5.6e-10 | 7.6e-07 | 28.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g168.t1 | MobiDBLite | 1 | 29 | ||||
| ahya_s0011.g168.t1 | Coils | 27 | 47 | ||||
| ahya_s0011.g168.t1 | Gene3D | 32 | 120 | ||||
| ahya_s0011.g168.t1 | SUPERFAMILY | 89 | 164 | IPR011992 | EF-hand domain pair | ||
| ahya_s0011.g168.t1 | ProSiteProfiles | 93 | 128 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g168.t1 | CDD | 98 | 161 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g168.t1 | ProSitePatterns | 106 | 118 | IPR018247 | EF-Hand 1, calcium-binding ... | ||
| ahya_s0011.g168.t1 | Gene3D | 121 | 236 | ||||
| ahya_s0011.g168.t1 | SUPERFAMILY | 218 | 376 | IPR016135 | Ubiquitin-conjugating enzym... | ||
| ahya_s0011.g168.t1 | PANTHER | 224 | 421 | ||||
| ahya_s0011.g168.t1 | PANTHER | 224 | 421 | ||||
| ahya_s0011.g168.t1 | CDD | 229 | 370 | IPR000608 | Ubiquitin-conjugating enzym... | Reactome: R-HSA-983168 | |
| ahya_s0011.g168.t1 | SMART | 230 | 375 | ||||
| ahya_s0011.g168.t1 | ProSiteProfiles | 230 | 364 | IPR000608 | Ubiquitin-conjugating enzym... | Reactome: R-HSA-983168 | |
| ahya_s0011.g168.t1 | Pfam | 231 | 369 | IPR000608 | Ubiquitin-conjugating enzym... | Reactome: R-HSA-983168 | |
| ahya_s0011.g168.t1 | Gene3D | 237 | 384 | IPR016135 | Ubiquitin-conjugating enzym... | ||
| ahya_s0011.g168.t1 | ProSitePatterns | 301 | 317 | IPR023313 | Ubiquitin-conjugating enzym... | MetaCyc: PWY-7511|Reactome: R-HSA-983168 | |
| ahya_s0011.g168.t1 | ProSiteProfiles | 379 | 422 | IPR015940 | Ubiquitin-associated domain | ||
| ahya_s0011.g168.t1 | SUPERFAMILY | 384 | 421 | IPR009060 | UBA-like superfamily | GO:0005515 | |
| ahya_s0011.g168.t1 | SMART | 384 | 421 | IPR015940 | Ubiquitin-associated domain | ||
| ahya_s0011.g168.t1 | Gene3D | 385 | 422 | ||||
| ahya_s0011.g168.t1 | Pfam | 385 | 419 | IPR015940 | Ubiquitin-associated domain |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g168.t1 | sp|P61087|UBE2K_MOUSE | Ubiquitin-conjugating enzyme E2 K | 0.0 |
| ahya_s0011.g168.t1 | sp|P61086|UBE2K_HUMAN | Ubiquitin-conjugating enzyme E2 K | 0.0 |
| ahya_s0011.g168.t1 | sp|P61085|UBE2K_BOVIN | Ubiquitin-conjugating enzyme E2 K | 0.0 |
| ahya_s0011.g168.t1 | sp|P52486|UBCD4_DROME | Ubiquitin-conjugating enzyme E2-22 kDa | 0.0 |
| ahya_s0011.g168.t1 | sp|Q9FI61|UBC27_ARATH | Ubiquitin-conjugating enzyme E2 27 | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g168.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g168.t1 tgtagataagaaattttattttcgaatcgtaacacaggtttcactcattaaaagttgaaaagtgctctattcgtttccac cgatgcgcgatcaaaacagaacttcatcccgcagttcttcaatcacgtcacagagtgggactgggccacgatctccgtca gtcgaggcgcttaagatcatgagtaaactggaagaggaagagaacaagcgattaaaatccgacggcgctaagacctggtt acaaggtccccactctctgtcacgtcagagctgtcgctttgaactgccaatggatatgcgaattctcgaagagctttcac ctttgcagtacgtgtccaagttctgccgtgttagtggtcgccgaaaaacacttttcagacattatttcacaaaaaatgac cgtgatagagatggtaacgtcaacagaaaggaacttcacgctgctcttagagagctgtacgcacaatccattagcaccga acaagtagacgccatccttgagcatcttgacatcgacaaatccgtaggtgtattcgacctcgacgtgttcacggctgtgg cagcgttctctgagcgatacttgcattaccgctatagcttagctgtactggatggaagcgagaagcgaacagttttggaa gagactgacttttgcgccttacgatggaaactagagggatgccaaagagctgagtggtgttcgcctttggtgttgaatgt tcatgcttacatcggtcaagaaataattataatgtctaatattgctataaagagagttcaaagagaattcaaggaggtca ttaacagcgaagagatcctaagatgtaaaatagagttagtggacgacacatacacaagactacgaggcgagatagcgggc ccacccgacaccccgtttgaaggtggcaactaccagttggacatatttattcctgatacctatccatttaatcctccaaa ggtgaatttcaagacgaagatatggcatccaaatatcagttcagtaactggagcaatctgtttggatatcttgaaagatc aatgggctgcagccatgactctgcgaactgttctcctatcaatacaggctttactctctgctgctgaaccagatgaccct caagatgcagtggttgcacaacagtataaagaaaaccctgagatatacaagaaaactgccagacactgggcagaagtgtt tgcaggagctccatcttcaaaagaccgggattgtgaacagaagataagtcgactgacctcaatgggttttactaagaacc agagccttgttgccctctccacacattcttggaatgcagaaagagcagtggaatcgttacttaatagctgacattattac attttgccaattatctattgtttttgattgtactatattcttacttctgacatgtgctgtctgtcaattttggcaacctc tgtgaaagcatttgaatggaatacacaagatagtttcctatgtcaaaattacatgtttcttatgtcaattgaatggaatt tctgccagctcagtcacattgactgctagtagtctgcaggcactggattggagctgagggatattgactactatagattg gaggaatggagcttgaaggttgatcttcagtaaataaagctcattggtaata |
|
Protein
| Protein ID | ahya_s0011.g168.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g168.t1 MRDQNRTSSRSSSITSQSGTGPRSPSVEALKIMSKLEEEENKRLKSDGAKTWLQGPHSLSRQSCRFELPMDMRILEELSP LQYVSKFCRVSGRRKTLFRHYFTKNDRDRDGNVNRKELHAALRELYAQSISTEQVDAILEHLDIDKSVGVFDLDVFTAVA AFSERYLHYRYSLAVLDGSEKRTVLEETDFCALRWKLEGCQRAEWCSPLVLNVHAYIGQEIIIMSNIAIKRVQREFKEVI NSEEILRCKIELVDDTYTRLRGEIAGPPDTPFEGGNYQLDIFIPDTYPFNPPKVNFKTKIWHPNISSVTGAICLDILKDQ WAAAMTLRTVLLSIQALLSAAEPDDPQDAVVAQQYKENPEIYKKTARHWAEVFAGAPSSKDRDCEQKISRLTSMGFTKNQ SLVALSTHSWNAERAVESLLNS |
|