Gene
| Gene Model ID | ahya_s0011.g173 |
|---|---|
| Locus | sc0000011 : 3698671 ... 3713132 : + |
| To GenomeBrowser | sc0000011:3698671..3713132 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g173.t1 | 1 | 1 | Cofilin_ADF | 18 | 150 | 4.2e-15 | 55.9 | 3.5e-19 | 5.6e-15 | 55.5 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g173.t1 | PANTHER | 1 | 154 | IPR017904 | ADF/Cofilin | GO:0015629|GO:0030042 | |
| ahya_s0011.g173.t1 | PANTHER | 1 | 154 | ||||
| ahya_s0011.g173.t1 | SUPERFAMILY | 1 | 153 | ||||
| ahya_s0011.g173.t1 | Gene3D | 1 | 156 | IPR029006 | ADF-H/Gelsolin-like domain ... | ||
| ahya_s0011.g173.t1 | ProSiteProfiles | 3 | 153 | IPR002108 | Actin-depolymerising factor... | GO:0003779|GO:0005622 | |
| ahya_s0011.g173.t1 | SMART | 8 | 153 | IPR002108 | Actin-depolymerising factor... | GO:0003779|GO:0005622 | |
| ahya_s0011.g173.t1 | Pfam | 14 | 150 | IPR002108 | Actin-depolymerising factor... | GO:0003779|GO:0005622 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g173.t1 | sp|Q5U4Y2|COF2_XENTR | Cofilin-2 | 6.0e-09 |
| ahya_s0011.g173.t1 | sp|Q5XHH8|COF2_XENLA | Cofilin-2 | 7.0e-09 |
| ahya_s0011.g173.t1 | sp|P21566|COF2_CHICK | Cofilin-2 | 8.0e-07 |
| ahya_s0011.g173.t1 | sp|Q5G6V9|COF2_PIG | Cofilin-2 | 1.0e-06 |
| ahya_s0011.g173.t1 | sp|Q9Y281|COF2_HUMAN | Cofilin-2 | 1.0e-06 |
Transcript
| Transcript ID | ahya_s0011.g173.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g173.t1 ttttttaccatatttggccatatcaaagactttctatgtgacctggcgctcctcgcttattgggttcgttttcgtagttt atgttgcaagaggacacaggaaattttcctcgtggaagctttttaattccagagattttgaagtcttagaggtgtcgaat catcgtaaaaggaattcatcatggcaatgtcaggaattaaggttaatgactatgtatgggagcattttaatggattcaag atgagggaaaagaatacaaaatcaattcggaccctcttcacttgcaagataagagataacaaggaggttgtttttgacaa agaggttgatgaatttaagggggacgaagatgagaaaaatttcatggaagcatatggtcaatattgccaaaacatgctca agacattggacttggatgagccccagtttatcttcctgaaggtcttcttcataaagaaagatggatctgaaaccgataag gttgtttgcatcttctggactacagacgacatgcctactaagaagagaatggtcttttcctctactgcaatagggttgaa accgaaaatctcggcggtggcgactgtgtttgaattacatagtaccgatgacttggattataagcaattgcaggagttat tgagagagaaaaagtgacagtgaatgactacaagaacacctttgtttctttttattttatgagttcactactgtttacgc attgcaagccaaactcagcttagtgtaatatcaacaatttctatgcactacttaattgaaagaattctctacctttttca cagttgcgtgttcaaggggaaaatataccgcattgattgaaacttgttcgtcaatccctgctttttgctaaagatagatt ttgaattttgtcataatgtggcctcttttacctgctaggatgtggtgttggggggggggtgaaataagccattacttaac caccccttcctcgttaccttcttttttttcgcactccaggcatcgtgccgcctttattccacgctcagccattacataga aaattgttattttaaagataaatttctccagtgtcataagtagtgaggatacatcagccaattaaacgttttgattttct gttaaacgttgcaatagatgcaattatgcggtttaaaatttaacgagacggtgtcagtgaacgccgatcattgcacgagc cggaaaagatggctttactcagaatggaaattgaaatttaatgtgttctgggagtcgttcgtttgagctgtacctgaggt agcagcgactaccagctacatcggttatgcatttcgtgacggtgttctacgttttatatcattctagtcgatctcctttg tggtccgacttggtattaggctatcggagttcgaatcatcaaagtgaaataagtcacaggggaaagtgattggccggccc ggtgtacaggctatgcgaaaggaatctgggattatcggggaaacggcattccaaattgctagcaagaaaggtgatacagt aaaacgagactggactggagtagtaaaacattaggtggatgtgcgtaacgcgtgtaaatgcctttctgtgttatactaat ccaatccagtctttttctgtattatgcccatttaatgaaagacggaaaattactcttttggttgtgcctactatccctac aaaactcgttggcctgaacaaaattcgtaatagttcctgcccgaattaagaccgatcgaggagaaagaaaagcagattaa ctcc |
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Protein
| Protein ID | ahya_s0011.g173.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g173.t1 MSGIKVNDYVWEHFNGFKMREKNTKSIRTLFTCKIRDNKEVVFDKEVDEFKGDEDEKNFMEAYGQYCQNMLKTLDLDEPQ FIFLKVFFIKKDGSETDKVVCIFWTTDDMPTKKRMVFSSTAIGLKPKISAVATVFELHSTDDLDYKQLQELLREKK |
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