Gene
| Gene Model ID | ahya_s0011.g177 |
|---|---|
| Locus | sc0000011 : 3813001 ... 3817248 : + |
| To GenomeBrowser | sc0000011:3813001..3817248 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g177.t1 | 1 | 1 | Med26 | 34 | 81 | 2.5e-13 | 49.7 | 7.5e-17 | 6.1e-13 | 48.5 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g177.t1 | Gene3D | 1 | 97 | IPR035441 | TFIIS/LEDGF domain superfamily | ||
| ahya_s0011.g177.t1 | PANTHER | 2 | 284 | ||||
| ahya_s0011.g177.t1 | SMART | 5 | 83 | IPR003617 | Transcription elongation fa... | GO:0005634 | |
| ahya_s0011.g177.t1 | ProSiteProfiles | 6 | 84 | IPR017923 | Transcription factor IIS, N... | GO:0005634 | |
| ahya_s0011.g177.t1 | CDD | 8 | 81 | ||||
| ahya_s0011.g177.t1 | SUPERFAMILY | 8 | 89 | IPR035441 | TFIIS/LEDGF domain superfamily | ||
| ahya_s0011.g177.t1 | Pfam | 34 | 81 | IPR017923 | Transcription factor IIS, N... | GO:0005634 | |
| ahya_s0011.g177.t1 | MobiDBLite | 90 | 179 | ||||
| ahya_s0011.g177.t1 | PANTHER | 296 | 388 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g177.t1 | sp|Q7TN02|MED26_MOUSE | Mediator of RNA polymerase II transcription subunit 26 | 2.0e-22 |
| ahya_s0011.g177.t1 | sp|O95402|MED26_HUMAN | Mediator of RNA polymerase II transcription subunit 26 | 6.0e-22 |
| ahya_s0011.g177.t1 | sp|Q90YY5|MED26_XENLA | Mediator of RNA polymerase II transcription subunit 26 | 1.0e-21 |
| ahya_s0011.g177.t1 | sp|A5PK23|MED26_BOVIN | Mediator of RNA polymerase II transcription subunit 26 | 5.0e-21 |
| ahya_s0011.g177.t1 | sp|Q90YL3|MED26_DANRE | Mediator of RNA polymerase II transcription subunit 26 | 6.0e-21 |
Transcript
| Transcript ID | ahya_s0011.g177.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g177.t1 atcccataatatattccgtgtccttgtcgggaggtcgtcatgtctcggtctgccttgcatggcgtatggcagggaggaag agcctctagcttggaaactccatgcagcactcgccacaggagatcaaaactatcctagaccgtgtagtagattctgatgg aaatgttttggacatggcggccgttttggaggtagtgacaatcttagagcgtctcccgatcaccaaagaggctctcgaga aaacaagattggggaagacaatcaaccttcttcgcaagaaaacaacaaatgaagaattagcaaaacgagccaaaggactt gttaaaaaatggcaaaagcttgttatcaatcacctggagaccctacgtaatgtagattctcctgtaaatgggaatccttt gccatcaccacagatcaatggaactttaaaggaaactgaaaagccagaatctccggcaggtgatagagcaggcaaaaata aaattattggagggaaaaaaagaggcattaaaagaaaacgcggaagttgttcaagttctgaaaactcacctactgtattt gtgaagtcagatgactctgaaagcttgcctggtactcctaattctgcccaagatgcaggtcttggaggtcagaaaagtgt caatcctttgttaaccatacaatccaaaaagaaagagtgtataactactgtgtcacaggataaccaatcacctatatctc cacttgttcagtcatcaacctcttgggttgaaggggctgaacatttaccatcagtagcaactgaattacagagtagtgaa gataccagtattctttcggtagattctggaattgattcacaagcaagtgttcaaagaacagaagaactgtttcatgaagt acagaacacttcttgtgagtctgtcttcaacattgacagcctatcagattcaacagccaaccaagacttgtgtaccccaa aggacccttgcgacagactagcagtttcaaaaagtattgaaacaccaacagatgaacccagtggagttaactgtacatct gacattcctcacaattctgatagagataatttgctttcgcaagaaacaatgtttgaatcagaggctgcaccatcactaag ccctaaagaattagtattagatgtgaatgtgcatgcaaatggtgtaacaggccgatatgggggtgacggtgcttggtaca attggactgaagtaatgccctccggtgatggcatgttgcaagtgttaccttatgtgattcttgaataaattaattatcat tgaaacatgccggtggatcacatctgaatgaatgtaagtaatgccacataacaaggaaagttcagtttttgaaatttgta tcatttaaagcttgactctgtgaataaacctgaattacttagtgtgtcaagaaattggtgtaagattttttattctatct gaattagatttacacctttccaatttgcaaagaaatgtacagctgtcaaagatcatgcatccatcagaggaaagtctagt cataagactctgaaggatacctatggaagaaaaaaaaggacttttttgagttcttctttgcataaactgcctcaataagt taacttttacctaaaacctgatgagcatgttaatgttctttaccgtttattattaacaaagtaaaacaaaaaacaaaatg ttcaaagattttgaagtctgtacaaatttttcagtcaaaataatggtgttagtggtatttattttgttcctaccttgtga gtacaactgtcaattatttttttgacaaaaaaaatatcaatatgcacagagtcttgaaattgttagctttctatgttaac caaaatttatgaaaaataaaaactggtgaggaagtttgatataatttatgcttttcagtcccagtatgagatgtaacaac cagtttctccagtgaaatctttcagtcaaggaccaggctaagaccttagtaatgcatttcaagaaaatgagcaggaataa ataacacaaatgaaatggattgaaaaagtgccatacagaaatcaagcagttgatttcctaaagggaagtccatttcaagg taacgataagatgaattcaaccccaaacaaaacgcaagaaaacactatgccattacaaaagcttcataaggttgccatgc accttactgcagccatccaacaaactttcacacttaacaactaaatgtaaatacgtcaactcgacaacccatagaacaga gttcaaattacaactgtgaactttgcaaggaagcatgactatcagtcaaatttttacactctggtaggcatataatttgc aaaaaaattttgttaggtggccacagtaaggtgtgtcgtactgtgaatcttgcactggcaatttagctaggaaaggcatt aaaaattaaaattaattttatgaagtttgatgaaattttgaaggtgacttcctgtctagttgctataacaacagtccttt caaaacaaaatagatgaataccatcaaccaatgcacttgggtgtacattgacaacaacaactatcatcaccatcatcaat ggaacagtcaactatacaaataacattatgatgaagtttccaccctttctacctttttttattttttggcaagttatctt atcatctgaaacatagctctgatgtccagaaaactgaacaaaagcaactgaggttgtcacaatgtttttgatgcttagaa acttaagcagccatgaagcagctcagaaaaacaaaaattgaaacgggtatttgcgatcaagctaaccagtggacagtaaa tcatcagtatcctgggcccagttgttcaaaacccaattaaactaatcctaggtta |
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Protein
| Protein ID | ahya_s0011.g177.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g177.t1 MQHSPQEIKTILDRVVDSDGNVLDMAAVLEVVTILERLPITKEALEKTRLGKTINLLRKKTTNEELAKRAKGLVKKWQKL VINHLETLRNVDSPVNGNPLPSPQINGTLKETEKPESPAGDRAGKNKIIGGKKRGIKRKRGSCSSSENSPTVFVKSDDSE SLPGTPNSAQDAGLGGQKSVNPLLTIQSKKKECITTVSQDNQSPISPLVQSSTSWVEGAEHLPSVATELQSSEDTSILSV DSGIDSQASVQRTEELFHEVQNTSCESVFNIDSLSDSTANQDLCTPKDPCDRLAVSKSIETPTDEPSGVNCTSDIPHNSD RDNLLSQETMFESEAAPSLSPKELVLDVNVHANGVTGRYGGDGAWYNWTEVMPSGDGMLQVLPYVILE |
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