Gene
| Gene Model ID | ahya_s0011.g18 |
|---|---|
| Locus | sc0000011 : 412470 ... 420955 : - |
| To GenomeBrowser | sc0000011:412470..420955 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g18.t1 | 2 | 1 | Alpha_L_fucos | 20 | 245 | 0.0 | 289.8 | 0.0 | 0.0 | 251.5 |
| ahya_s0011.g18.t1 | 2 | 2 | Alpha_L_fucos | 246 | 283 | 0.0 | 289.8 | 4.2e-15 | 3.4e-11 | 43.1 |
| ahya_s0011.g18.t1 | 1 | 1 | Fucosidase_C | 294 | 383 | 8.9e-18 | 64.5 | 2.0e-21 | 1.7e-17 | 63.7 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g18.t1 | ProSiteProfiles | 1 | 24 | ||||
| ahya_s0011.g18.t1 | PANTHER | 16 | 246 | ||||
| ahya_s0011.g18.t1 | PANTHER | 16 | 246 | IPR000933 | Glycoside hydrolase, family 29 | GO:0004560|GO:0005975 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | Pfam | 20 | 245 | IPR000933 | Glycoside hydrolase, family 29 | GO:0004560|GO:0005975 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | Gene3D | 23 | 245 | ||||
| ahya_s0011.g18.t1 | SMART | 28 | 334 | IPR000933 | Glycoside hydrolase, family 29 | GO:0004560|GO:0005975 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | SUPERFAMILY | 28 | 286 | IPR017853 | Glycoside hydrolase superfa... | ||
| ahya_s0011.g18.t1 | PRINTS | 84 | 99 | IPR016286 | Alpha-L-fucosidase, metazoa... | GO:0004560|GO:0006004 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | PRINTS | 123 | 139 | IPR016286 | Alpha-L-fucosidase, metazoa... | GO:0004560|GO:0006004 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | PRINTS | 170 | 189 | IPR016286 | Alpha-L-fucosidase, metazoa... | GO:0004560|GO:0006004 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | PRINTS | 210 | 226 | IPR016286 | Alpha-L-fucosidase, metazoa... | GO:0004560|GO:0006004 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | PRINTS | 238 | 259 | IPR016286 | Alpha-L-fucosidase, metazoa... | GO:0004560|GO:0006004 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | Pfam | 246 | 283 | IPR000933 | Glycoside hydrolase, family 29 | GO:0004560|GO:0005975 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | PANTHER | 246 | 385 | ||||
| ahya_s0011.g18.t1 | Gene3D | 246 | 285 | ||||
| ahya_s0011.g18.t1 | PANTHER | 246 | 385 | IPR000933 | Glycoside hydrolase, family 29 | GO:0004560|GO:0005975 | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
| ahya_s0011.g18.t1 | Gene3D | 286 | 386 | ||||
| ahya_s0011.g18.t1 | Pfam | 294 | 383 | IPR031919 | Alpha-L-fucosidase, C-terminal | KEGG: 00511+3.2.1.51|Reactome: R-HSA-6798695 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g18.t1 | sp|P17164|FUCO_RAT | Tissue alpha-L-fucosidase | 0.0 |
| ahya_s0011.g18.t1 | sp|P04066|FUCO_HUMAN | Tissue alpha-L-fucosidase | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g18.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g18.t1 cgatgttccggtgttcctgtgttccaggatgttcagatgttccgggatgttccggtgtaactggttttagtacgtatatg ccaaaatgaagggagctctcaattgtatttcaatttcggtgtatttagtggtcattacaagtagttttaccgcttgtgaa ggcggaaaatatgaacccacatgggaaagcctggatagcagacccataccgtattggtatgatgaagcaaaatttggaat tttcatgcattggggattgtattcagtccctagtttcggcagcgaatggttttggtattactggcaaggcaagaaggtcc ccaaattcgtcgacttcatgaaaaagaactatccaccaggattttcttacgcagattttgcacctatgtttacagcagag ttttttgatccagatgaatttgctcagcttgtggaaaactcaggagcgagctactacgttctaactaccaagcaccatga tggatggacaaactggaaatctaatgtgtcttggaattacaatgcagttgacagtggaccccacatggaccttgttgctg ctcttgccaagtccttccgtgagaaaacaaaagtgcactttgggttgtacttctcactttttgaatggtttcatcctttg tacttaaaggacaaggagaaccaatatcacactcaggaatatgtcaagcaaatttccaacccacaaatttacgaccttgt aaacaagtacaagccagatgtcctgtgggctgatggtgattgggaagcaagttcagattactggatgagcaaggatttct tggcttggctttataatgacagttgtggtggaaacttgcttctcaatatgggcccaaccaaggaaggcactattgtaccc gcattccaagagagacttcttcaaatgggtgaatggttgaagattaatggtgaggcgatctattcaacaagtccttggag agtacagaatgattcactgactccaaatgtttggtatacaacaacacgttcaagaccagaatttgttgcttatgcaataa ttgttggcaagtttcctatcaataacacaatagtgttgggggaacctattccaagtgacaaaacaatggttaccatgctt ggagttaaagatgttttcaaatggggtccttcttcatataatggaggcattaagatatacattccaccatacctccatct cccttctcagtatggctgggttttcaaactggagaatgtccgttaatttttgtcagtatgctattttttactgcatggtt agcttcagtagaggggatgtaagtttgtaatgtgctactttttgtattaaaattgaaggtgcttcttgcccttatctcaa cgagctctcaataagagaccgtcttgtcagaaattacagtttaggtctctgatagagcggttctcaaatgcctgtcgaaa atacaataccaaagttattacagtaatccaccaatcatagcagggaaagataatgcgatgaaccaatcatagtatattcc tagcaattaccttaaaaggcgcgggataaattgggcgtacgaagtgcaaacatcggttttggcttttcctcaatctcgac tccagtgctctttgcgcttacgcgaagaaagcggcgtaagcactggggtcgagaacgggtttttcctctacttggttgaa aaaatggcgcaaggtctttgagccaatcaccaagcgtaacaatcccaatggcgttattactttcgacagttgttttgaaa ctgctctaagttctcacaacaggttacacagctttatcagaaaacgtctgtttctttcatccaatgtgagactgaaattt tctgttttgatacccatgaaatgaattttcttttatactgcttggtaattttgcagaagtagatacgaaattttgctttg cagtctgcacaaatgcaataagcattaaaagtgtcaatatcca |
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Protein
| Protein ID | ahya_s0011.g18.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g18.t1 MKGALNCISISVYLVVITSSFTACEGGKYEPTWESLDSRPIPYWYDEAKFGIFMHWGLYSVPSFGSEWFWYYWQGKKVPK FVDFMKKNYPPGFSYADFAPMFTAEFFDPDEFAQLVENSGASYYVLTTKHHDGWTNWKSNVSWNYNAVDSGPHMDLVAAL AKSFREKTKVHFGLYFSLFEWFHPLYLKDKENQYHTQEYVKQISNPQIYDLVNKYKPDVLWADGDWEASSDYWMSKDFLA WLYNDSCGGNLLLNMGPTKEGTIVPAFQERLLQMGEWLKINGEAIYSTSPWRVQNDSLTPNVWYTTTRSRPEFVAYAIIV GKFPINNTIVLGEPIPSDKTMVTMLGVKDVFKWGPSSYNGGIKIYIPPYLHLPSQYGWVFKLENVR |
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