Acropora hyacinthus ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDahya_s0011.g181
Locus sc0000011 : 3836612 ... 3842060 : -
To GenomeBrowser sc0000011:3836612..3842060
Genes list of scaffold sc0000011

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
ahya_s0011.g181.t1 2 1 Calreticulin 16 251 0.0 284.0 0.0 0.0 210.4
ahya_s0011.g181.t1 2 2 Calreticulin 253 326 0.0 284.0 9.7e-29 7.9e-25 87.4

Results of InterPro Scan
Gene Model ID Analysis Start End i_acc i_desc GO Pathway
ahya_s0011.g181.t1 PIRSF 1 403 IPR009169 Calreticulin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 PANTHER 7 405
ahya_s0011.g181.t1 PANTHER 7 405 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 Gene3D 7 341
ahya_s0011.g181.t1 SUPERFAMILY 13 212 IPR013320 Concanavalin A-like lectin/...
ahya_s0011.g181.t1 Pfam 16 251 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 ProSitePatterns 92 107 IPR018124 Calreticulin/calnexin, cons... GO:0005509
ahya_s0011.g181.t1 PRINTS 94 112 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 PRINTS 120 136 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 ProSitePatterns 124 132 IPR018124 Calreticulin/calnexin, cons... GO:0005509
ahya_s0011.g181.t1 SUPERFAMILY 195 309 IPR009033 Calreticulin/calnexin, P do... GO:0005509|GO:0005515
ahya_s0011.g181.t1 MobiDBLite 196 290
ahya_s0011.g181.t1 PRINTS 209 222 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 ProSitePatterns 236 248 IPR018124 Calreticulin/calnexin, cons... GO:0005509
ahya_s0011.g181.t1 PRINTS 236 258 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 Pfam 253 326 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 PRINTS 274 293 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 PRINTS 307 327 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 MobiDBLite 339 440
ahya_s0011.g181.t1 Coils 344 401
ahya_s0011.g181.t1 PANTHER 390 440
ahya_s0011.g181.t1 PANTHER 390 440 IPR001580 Calreticulin/calnexin GO:0005509|GO:0005783|GO:00...
ahya_s0011.g181.t1 PIRSF 390 440 IPR009169 Calreticulin GO:0005509|GO:0005783|GO:00...

Blast Hit to nr / sp
query Subject ID Subject Name evalue
ahya_s0011.g181.t1 sp|P14211|CALR_MOUSE Calreticulin 0.0
ahya_s0011.g181.t1 sp|P18418|CALR_RAT Calreticulin 0.0
ahya_s0011.g181.t1 sp|P15253|CALR_RABIT Calreticulin 0.0
ahya_s0011.g181.t1 sp|P28491|CALR_PIG Calreticulin 0.0
ahya_s0011.g181.t1 sp|Q8K3H7|CALR_CRIGR Calreticulin 0.0

Transcript
Transcript IDahya_s0011.g181.t1
Definition-
>ahya_s0011.g181.t1
cttattagtcacatgatgcaattttaccaatcagagctcaccacgcagaaggccggttcaactgtattcaattcacatgg
ttgctgctgcactgccgtagtagctttgttgaaggatttgtttgaggtggaatctgaaaggctgtattcctaaaattatg
gcgttttgtcgatttctttttatggttttagtctcttgtgttttagcggaagacccaaaaatttacttcgttgagaaatt
cgaagatgagagttacacggacagatgggttgaatccaccttcaaaggcagtgacgctgggaaattcaagtggtcggctg
gaaaattctacaacgatgctgatctagacaaaggtatacaaactagtcaagatgctaaattttacggtctctctgctaaa
ttcgatgaacctttctcaaacgaaggcaaaacactggttatacagtttcaagtgaaacacgaacaaaccattgactgcgg
tggtggatatgttaaggtgtttgatagttcccttgaccagaaacaaatgcatggtgattctccgtaccttatcatgtttg
ggccagatatctgtggaccgggtacaaagaaagttcatgttattttcaactacaaaggaaagaacttacttacaaacaaa
gatatcaggtgcaaggatgatgaattcacacatctgtacaccctcatcgttaaatctgataatacatacgaagttcgtat
tgatggctctaaagtggaaagtggagagcttgaagctgattgggacttcttgccaccaaagaagatcaaagacccaaagg
ccaagaagcctgaagattgggatgacaacaaaaaaattgatgatcccgaagacaaaaaaccagaggactgggataagccc
caacacattccagatcctgatgcaaagaaaccagatgactgggatgatgaaattgatggcgaatgggaaccgccaatgat
tgataacccagactacaagggtgaatggaaacccaagcaaattgacaatcccaactacaaaggtgaatgggttcatccag
aaattgataacccagagtatcaacctgatgagtcgctgtacaaatatgatgacattggtgctctaggttttgatttatgg
caggtgaaatcgggaactatttttgataatgttctagtaactgattcagttgattatgctgaaacatttgctaaggaaac
tttcgaaaaaactaaggaaggtgaaaagaaaatgaaggatgaacaagatgagaaagaacgtaaagagcgagaggaagaag
agaagaaggcgaaagaagaggaagaaaaaaagaaagcagaagaggaagaggaggaggaagaggaagaggaggaggaagaa
agcaaagatggtgagaagtctgaagaagcaggaactgaagaagaacctaaagaagaagcttcaagcgaagaacccaccag
tgaagaacctactagtgaagaagataaaacaacggaagaagcttctaccaaagatgaactttaattgaatcactacatct
agggtttttaataaaagcaaagaacttaataagagcaatccacaagttagaacttataagctggatttaacttgttatat
ggtatttctggtgtcttgtttctttccttttttttccaatgcctgggccctatctcccaaggtacatcaccttcataatc
aatgcaaaagaaaactattttgtttcattctgcaacagtgcataatttctcttctcttgatgtacctttcccttagtaac
ccaaccatttggtattccatcttacaacaaagtaccttgtttaagtaatggtactgttaatatcttgtgcagtaaaacaa
taaaaacacttttgctaattttatattattcataggaaaaagcatctgttggtgctttttgtagataaatggtggaagcc
aacttgtcaaactgacttgacactgaaagggtatttttgtgttatgtgggcttaacattgtgttttattgattcttctct
atgggttgaggttatgtttataaacatttacagtttctaatgttgcatggatgtgctgtgaccattctgtctgtaatagt
tactgttgtagatgttattttcccatgagtaatgacactgacataagccaatttttgaaaggtgggttgccaataatttt
taaaatgggatctccaaggacaaagatgttttgagttaaatgatggttgctcagcaatgagggtagactatgaaacaatt
ttcaatgttcatggtgggaacaggtaacttgcatgatggtgtttttctatggagacaagaatgctttgtcaaaatgcttt
cttaatcaaatttgttttctctcttgtgaattattgtggaaagtagcttgacaagagaggccactaacatggtagtgaaa
tgccatcatgcaaatggcctattaaccggaatctaatgctgatgagatgctctaaccattgcccgccgagagctccttgt
aagctaggtgacttaattaacagtgtacctttttgcaccaggagtttctgaaaggatctctgaaaggaaatctattcagt
tgttccttcaccagttgcaaagcaacccttgttaacattaatcatgcacaagtgcattcagtgcttgtccatcttttgta
aaatggtgttttgagcatctgggaattcaagtgcttatatgtacctttcttgaaagattgttttgacagggtttaattca
aggccaatgtggaagcacacttggggcaagtagtaatgggaaagttaatctttaactgtcctttgttgttattaccccaa
gcagtgctttctgtactttgagttctttttgttttgtgaaaagtcatttgcctttttccccccatctgttgcagcttagg
ttatgagcaaagcacttgattcattaaaatcaagccattcaa

Protein
Protein IDahya_s0011.g181.t1
Definition-
>ahya_s0011.g181.t1
MVLVSCVLAEDPKIYFVEKFEDESYTDRWVESTFKGSDAGKFKWSAGKFYNDADLDKGIQTSQDAKFYGLSAKFDEPFSN
EGKTLVIQFQVKHEQTIDCGGGYVKVFDSSLDQKQMHGDSPYLIMFGPDICGPGTKKVHVIFNYKGKNLLTNKDIRCKDD
EFTHLYTLIVKSDNTYEVRIDGSKVESGELEADWDFLPPKKIKDPKAKKPEDWDDNKKIDDPEDKKPEDWDKPQHIPDPD
AKKPDDWDDEIDGEWEPPMIDNPDYKGEWKPKQIDNPNYKGEWVHPEIDNPEYQPDESLYKYDDIGALGFDLWQVKSGTI
FDNVLVTDSVDYAETFAKETFEKTKEGEKKMKDEQDEKERKEREEEEKKAKEEEEKKKAEEEEEEEEEEEEEESKDGEKS
EEAGTEEEPKEEASSEEPTSEEPTSEEDKTTEEASTKDEL

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