Acropora hyacinthus ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDahya_s0011.g185
Locus sc0000011 : 3877011 ... 3884431 : +
To GenomeBrowser sc0000011:3877011..3884431
Genes list of scaffold sc0000011

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
ahya_s0011.g185.t1 1 1 Pkinase 2 118 1.3e-29 103.2 9.3e-33 2.2e-29 102.5
ahya_s0011.g185.t1 1 1 Pkinase_Tyr 3 114 1.5e-13 50.5 1.1e-16 2.7e-13 49.7
ahya_s0011.g185.t1 2 1 POLO_box 302 363 4.9e-33 113.0 4.1e-19 9.6e-16 57.6
ahya_s0011.g185.t1 2 2 POLO_box 399 467 4.9e-33 113.0 8.9e-18 2.1e-14 53.3

Results of InterPro Scan
Gene Model ID Analysis Start End i_acc i_desc GO Pathway
ahya_s0011.g185.t1 PANTHER 1 480
ahya_s0011.g185.t1 ProSiteProfiles 1 118 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:00...
ahya_s0011.g185.t1 Gene3D 1 168
ahya_s0011.g185.t1 PANTHER 1 480
ahya_s0011.g185.t1 SMART 1 118 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:00...
ahya_s0011.g185.t1 SUPERFAMILY 2 139 IPR011009 Protein kinase-like domain ...
ahya_s0011.g185.t1 Pfam 2 118 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:00...
ahya_s0011.g185.t1 MobiDBLite 168 218
ahya_s0011.g185.t1 Gene3D 169 383 IPR036947 POLO box domain superfamily GO:0005515
ahya_s0011.g185.t1 MobiDBLite 259 289
ahya_s0011.g185.t1 SUPERFAMILY 284 379
ahya_s0011.g185.t1 CDD 292 379 IPR033701 First polo-box domain
ahya_s0011.g185.t1 ProSiteProfiles 301 364 IPR000959 POLO box domain GO:0005515
ahya_s0011.g185.t1 Pfam 302 363 IPR000959 POLO box domain GO:0005515
ahya_s0011.g185.t1 Gene3D 384 485 IPR036947 POLO box domain superfamily GO:0005515
ahya_s0011.g185.t1 SUPERFAMILY 390 475
ahya_s0011.g185.t1 CDD 392 474 IPR033695 Second polo-box domain
ahya_s0011.g185.t1 ProSiteProfiles 398 469 IPR000959 POLO box domain GO:0005515
ahya_s0011.g185.t1 Pfam 399 467 IPR000959 POLO box domain GO:0005515

Blast Hit to nr / sp
query Subject ID Subject Name evalue
ahya_s0011.g185.t1 sp|Q9H4B4|PLK3_HUMAN Serine/threonine-protein kinase PLK3 0.0
ahya_s0011.g185.t1 sp|Q60806|PLK3_MOUSE Serine/threonine-protein kinase PLK3 0.0
ahya_s0011.g185.t1 sp|Q9R011|PLK3_RAT Serine/threonine-protein kinase PLK3 0.0

Transcript
Transcript IDahya_s0011.g185.t1
Definition-
>ahya_s0011.g185.t1
cggtagacagttatcgaggccatgagtgaaaatgaaaatatgattgcttggtatcactgggaaatggacaatgccttgag
aaccgcagacgtatccaatgatcagatgtattaatcccagcgctgagttttgacttaaattatggattccgggattgaaa
caaatgacagtgtcctcagcgaaggtgataaggctataaagcctgtagttttcaaagctgtagtggatcgaccgataaag
aaaccaagaaccggtaaagatgtccctttaccggaagtgccaaaagtcatcgacaacggaaatggaaaacgttactttcg
cggcagattgcttggaaagggggggtttgcgcgagtttatgaggtgacagacatgtcaactaataaagtatacgctttga
aagctgtacccaaagtgaaacttagcaagtcagcggacagatacaacaagatcgaatcagaaatcgagctccacaaaagc
cttcgccaaagatacgtggttggtttttacggaaattttgaagacgagcaccatgtttacatattgctagagctctgcag
tcgaaagtccttagtccagacgcttaagaatcgcggaaaattaacggaacccgaagtgcgatatcttatgtatcaagccg
tgcaagcatgctcttatttgcacgctcaacgggtcatacatcgtgatatcaaggtgggcaatttttttcttaatgctgac
atggaattgaggcttggagactttggtttggcagtgagactaaaggaaggagagacaaagataaagacaatgtgcggtac
tccaaactacatcgcccctgaagttctctccaaagaaggacacagttataaagtggatacttgggcacttggatgtgtga
tgtatactttgttgattggtcatcccccgtttgaaacaaaatctttacgcgaaacctacaacagaatacgaaacaatgaa
tacaccattccgtcgaggatatccgacaacgctgccgggctgatcaaaaaaatgcttcaagcaaatccgaaagaaaggcc
atcgctcaacgaaattcttgaggatgactttttcatgaaaggctttcatcccacgcgactcccgatttcagctgtcacgg
cttcgccaagatggtccgagtacgataaaactggggagtcggacaaaaagatttcgagggaggccattaagaaaataaca
attgcattaacgcggcaaatgaaactctctagtgaggacaaagaggaatcaacggagggagatccttgcgcgagagaaga
caacgatcgatacatcggcaaagtagactctccttgtccaaaagacgtcgttttgaatggaggagttagtcaaagtaatc
gtccaaaacaagataaggtgctagaagatataagaaatttagatcagaagacttcaaaatatttcccgccagacgaactg
ctccttaaattatcgaactgcgtggactgcctcgaagagcgccaacagaaaccacccatcaaatcttcgggactcttttc
aaagaggccctctgatcagacatgtggggacgtaaagagatcagcgggaacacaacctcatgatgccccaaagcccttac
tggttacgaaatgggtagattacagtaacaagtatggatttggagcgcagctttcagatggcagtgttactgttaggttt
aacgatggcagtaaaatcgcattatcacctggtaaaagcatggtgcattactgtgataaacaagacaagctttctcagtt
gcgttccactgcagttccaacaaacttacaggccaagttcatgttgctaacatatttttctaattacatggataagcact
tattgaagggtggtgattcaaaaggaggcgtttcagctgaccagcccaactttccctttgtggacatttggtttcgcaca
gacattacaatggtcatgtacctcagcaatggtaccattcaggtaaatttctttgatgatcacaccaagatagtcctcat
tcccggtggtaaacacgttttagtcatctacattgacaagaacagagaaggtacaagctatctcctatcggaaatagctt
cacaaggctgcacaacagaaatgattgatagactacgctattgcaagcgggtaatgaaaaaggtttgggatctagttgag
gaagagagaggcccagacagctgaagggcgactccggatttccaattgttaaaaaaatgataaagctccaaaactctagg
caaattaaacgtggataacttaaatttattcagcggtaactttaactcgccgcacaacattaacgttcgcccaaacatca
acgcatgcggtttacaactactgtactagtatttggaaagggaaactcaaataatctcctgtattaactctttgacggca
ataaagaattgagcctttt

Protein
Protein IDahya_s0011.g185.t1
Definition-
>ahya_s0011.g185.t1
MELRLGDFGLAVRLKEGETKIKTMCGTPNYIAPEVLSKEGHSYKVDTWALGCVMYTLLIGHPPFETKSLRETYNRIRNNE
YTIPSRISDNAAGLIKKMLQANPKERPSLNEILEDDFFMKGFHPTRLPISAVTASPRWSEYDKTGESDKKISREAIKKIT
IALTRQMKLSSEDKEESTEGDPCAREDNDRYIGKVDSPCPKDVVLNGGVSQSNRPKQDKVLEDIRNLDQKTSKYFPPDEL
LLKLSNCVDCLEERQQKPPIKSSGLFSKRPSDQTCGDVKRSAGTQPHDAPKPLLVTKWVDYSNKYGFGAQLSDGSVTVRF
NDGSKIALSPGKSMVHYCDKQDKLSQLRSTAVPTNLQAKFMLLTYFSNYMDKHLLKGGDSKGGVSADQPNFPFVDIWFRT
DITMVMYLSNGTIQVNFFDDHTKIVLIPGGKHVLVIYIDKNREGTSYLLSEIASQGCTTEMIDRLRYCKRVMKKVWDLVE
EERGPDS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495