Gene
| Gene Model ID | ahya_s0011.g21 |
|---|---|
| Locus | sc0000011 : 435636 ... 448109 : + |
| To GenomeBrowser | sc0000011:435636..448109 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g21.t1 | 1 | 1 | ERCC4 | 413 | 608 | 2.0e-12 | 47.4 | 1.0e-15 | 8.5e-12 | 45.4 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g21.t1 | CDD | 23 | 57 | ||||
| ahya_s0011.g21.t1 | Gene3D | 59 | 380 | IPR011990 | Tetratricopeptide-like heli... | GO:0005515 | |
| ahya_s0011.g21.t1 | MobiDBLite | 89 | 155 | ||||
| ahya_s0011.g21.t1 | PANTHER | 121 | 735 | IPR033310 | Mms4/EME1/EME2 | GO:0005634|GO:0006281|GO:00... | Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 |
| ahya_s0011.g21.t1 | MobiDBLite | 283 | 314 | ||||
| ahya_s0011.g21.t1 | Coils | 342 | 387 | ||||
| ahya_s0011.g21.t1 | Gene3D | 381 | 622 | ||||
| ahya_s0011.g21.t1 | SMART | 399 | 683 | IPR006166 | ERCC4 domain | GO:0003677|GO:0004518 | Reactome: R-HSA-6783310 |
| ahya_s0011.g21.t1 | Pfam | 413 | 608 | IPR006166 | ERCC4 domain | GO:0003677|GO:0004518 | Reactome: R-HSA-6783310 |
| ahya_s0011.g21.t1 | MobiDBLite | 546 | 568 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g21.t1 | sp|Q5NVA9|EME1_PONAB | Crossover junction endonuclease EME1 | 0.0 |
| ahya_s0011.g21.t1 | sp|Q96AY2|EME1_HUMAN | Crossover junction endonuclease EME1 | 0.0 |
| ahya_s0011.g21.t1 | sp|Q8BJW7|EME1_MOUSE | Crossover junction endonuclease EME1 | 0.0 |
| ahya_s0011.g21.t1 | sp|Q0IHN5|EME2_XENTR | Probable crossover junction endonuclease EME2 | 8.0e-29 |
| ahya_s0011.g21.t1 | sp|Q56A04|EME2_MOUSE | Probable crossover junction endonuclease EME2 | 2.0e-27 |
Transcript
| Transcript ID | ahya_s0011.g21.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g21.t1 caccaaagacatacaacctgagccagcaaattgtatgcggttaccgcggacaagaagtaattggtgttgtatgaagacac cacgtgtctacaataaagtccatatttcgaaatggcgaccattagggggtcaactttgttaccagcgggatgttctcctc agaaagtcccacaatttatgatcaatgaagtattggcaatatgccctcatgttaatcccaaggatgttgctaaggattta gttatcactggcagtacaacaagaacgatcaatcggattttagacggccagtttcctgcggcaattaacattgaggacac accatcagatgagcttgcaatttccgatgatggggttgaagaagacaaagtttcactgcacaggaattcagtgcctttga ctaataaaaaccaaagtcaagagagtgattcttcagaaacaaaaattgacacagactcagatgatgaagatgagagcagg agtttgttcactgctttaaagaacagattacattcaagggactccaataacacctcaacaaaaccgtccaaaatacagat agattccagtggaactggttgtaagccaatagctagcctctcaacaaaaaattcacattctggaaaagtgaaagaaacaa gttcaatcatagacatttcattctcagataacagtgacgatgatgatctttgtctacaagaaaaatacaactctgcagtc tgtaaaaaatccttatattcatcgaatcaaacgaaagggctggactctcgtgattgcattattgtgcttgagtcaaatga aatgcaaacttgtggaagtcagaggacgaaagaaacaactcaaaatgttgatctctttcaaagaaaggaagcagacttta tggattcaccggagtcttatgaggagactgatcacaacaaggacatcgatgattttccttgcatgctaccaatctcaaat gtaccatctgaaactcaaagcagtggtattagtcaatctggtttatctaaaaatgtctcagctagctcttcagacagtct caatgataattgcgctgaaattccagcaaagagaaaaaagaggacagctgaagaaatattgagccagaagaatgaagttt tgagaagaaagcaagctaggaagtgtgaacttcaagccaagaaagaggcacgagaaaaggaaaaacaggaaaggcagctt gcgagagagcagatgaagataaagcgggacaaagacaaacttttgaaaaaggcagaaactctgaatcagaagagtgaacg tttggatggctgtataaagcaaattgtggtgtgcattgatccagatgtattgcatggagaacagctgtcagatgagaaca cccttcttcaaaagttggaattacttggtgctggccatgaaattgtcactcaacttatcccttgcagtgttacttggaaa agagtaaatgtagaacacactgttgatgacactcttcaggtcctgacaaagacatcttatgttgaggaacgacacacaat tgtccgccttccagcaatgaaatttgttgaaatggtgtcttgcttttctcaggaaatgcaaaattcttgtatttcaacta ttgatgacaatgaaagcttggtcaactactgtgaaagagttctgcagatttatgcagagaaggttgtgacattggttatc atgggacttgagcagtatttcaaagatgtgaagctcaccaatcaaaggcactttcggaatgcagttcttggtccaagttc atcagtcaccgagaaaccaaggggtaaaggacgaaagaaaggtccagaaccaagtgttgtggtgtcgcgtgtcgatgtgg aggaggcactggtggatcttcagttttgtcagccaaactgccgagtaagaatgtgcgagactgaagaggaatttgctgag atgttgtccatgttcactaaagctgttgcagaggctccttataagaagaagcaaccagatatactgagcttttgtgttga aggcggagaaaaaggatctgtgaaggtatcaaaggatggcagtggattgaagagagtttggctgcaacattttgagcagt tcagaaatgtatcctcggacatggcgtctgccatcgttacagtgtatccatcaccccagagtttattgcaggcctattac agatgtaacagcaaggaagcagcagccagattactccaggatattgttgttcgaagaggggctggagtattggcaacaag tcgacgcattggtccagagctttctagaagggttcacatgcttttcacgtgtgacaatggcgacttacctttgaagtgaa taattaatattgactaatcaattattttgctgtttggttgatgtgacttctgactttaagttttctttctgtttctggat gcattatattctttggagttaccatccttgctttgatgagaatggaataaaaaagaagtactaataacaaaattattact gttacaaaatattaataattattatgattttagtttcgttgaaattacaatagatgccatgtataccatagtttttactt ttgaatgaaaataaagtattttaatttgc |
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Protein
| Protein ID | ahya_s0011.g21.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g21.t1 MATIRGSTLLPAGCSPQKVPQFMINEVLAICPHVNPKDVAKDLVITGSTTRTINRILDGQFPAAINIEDTPSDELAISDD GVEEDKVSLHRNSVPLTNKNQSQESDSSETKIDTDSDDEDESRSLFTALKNRLHSRDSNNTSTKPSKIQIDSSGTGCKPI ASLSTKNSHSGKVKETSSIIDISFSDNSDDDDLCLQEKYNSAVCKKSLYSSNQTKGLDSRDCIIVLESNEMQTCGSQRTK ETTQNVDLFQRKEADFMDSPESYEETDHNKDIDDFPCMLPISNVPSETQSSGISQSGLSKNVSASSSDSLNDNCAEIPAK RKKRTAEEILSQKNEVLRRKQARKCELQAKKEAREKEKQERQLAREQMKIKRDKDKLLKKAETLNQKSERLDGCIKQIVV CIDPDVLHGEQLSDENTLLQKLELLGAGHEIVTQLIPCSVTWKRVNVEHTVDDTLQVLTKTSYVEERHTIVRLPAMKFVE MVSCFSQEMQNSCISTIDDNESLVNYCERVLQIYAEKVVTLVIMGLEQYFKDVKLTNQRHFRNAVLGPSSSVTEKPRGKG RKKGPEPSVVVSRVDVEEALVDLQFCQPNCRVRMCETEEEFAEMLSMFTKAVAEAPYKKKQPDILSFCVEGGEKGSVKVS KDGSGLKRVWLQHFEQFRNVSSDMASAIVTVYPSPQSLLQAYYRCNSKEAAARLLQDIVVRRGAGVLATSRRIGPELSRR VHMLFTCDNGDLPLK |
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