Gene
| Gene Model ID | ahya_s0011.g216 |
|---|---|
| Locus | sc0000011 : 4153039 ... 4163218 : - |
| To GenomeBrowser | sc0000011:4153039..4163218 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g216.t1 | 1 | 1 | JmjN | 10 | 44 | 2.7e-12 | 46.3 | 3.5e-15 | 5.1e-12 | 45.4 |
| ahya_s0011.g216.t1 | 1 | 1 | JmjC | 168 | 284 | 1.80067e-42 | 144.2 | 4.2039e-45 | 5.89947e-42 | 142.6 |
| ahya_s0011.g216.t1 | 1 | 1 | PHD_2 | 551 | 584 | 1.1e-11 | 44.0 | 7.1e-15 | 1.1e-11 | 44.0 |
| ahya_s0011.g216.t1 | 1 | 1 | zf-HC5HC2H_2 | 597 | 707 | 1.3e-27 | 96.0 | 8.5e-31 | 1.3e-27 | 96.0 |
| ahya_s0011.g216.t1 | 1 | 1 | zf-HC5HC2H | 617 | 708 | 4.9e-16 | 58.6 | 3.3e-19 | 4.9e-16 | 58.6 |
| ahya_s0011.g216.t1 | 1 | 1 | DUF4537 | 726 | 833 | 1.1e-06 | 28.6 | 1.4e-09 | 2.1e-06 | 27.6 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g216.t1 | PANTHER | 4 | 426 | ||||
| ahya_s0011.g216.t1 | PANTHER | 4 | 426 | ||||
| ahya_s0011.g216.t1 | SMART | 8 | 50 | IPR003349 | JmjN domain | Reactome: R-HSA-3214842 | |
| ahya_s0011.g216.t1 | ProSiteProfiles | 9 | 51 | IPR003349 | JmjN domain | Reactome: R-HSA-3214842 | |
| ahya_s0011.g216.t1 | Pfam | 10 | 44 | IPR003349 | JmjN domain | Reactome: R-HSA-3214842 | |
| ahya_s0011.g216.t1 | SUPERFAMILY | 75 | 316 | ||||
| ahya_s0011.g216.t1 | SMART | 135 | 301 | IPR003347 | JmjC domain | ||
| ahya_s0011.g216.t1 | ProSiteProfiles | 135 | 301 | IPR003347 | JmjC domain | ||
| ahya_s0011.g216.t1 | Pfam | 168 | 284 | IPR003347 | JmjC domain | ||
| ahya_s0011.g216.t1 | MobiDBLite | 324 | 355 | ||||
| ahya_s0011.g216.t1 | Coils | 340 | 360 | ||||
| ahya_s0011.g216.t1 | MobiDBLite | 387 | 433 | ||||
| ahya_s0011.g216.t1 | PANTHER | 396 | 869 | ||||
| ahya_s0011.g216.t1 | PANTHER | 396 | 869 | ||||
| ahya_s0011.g216.t1 | Gene3D | 458 | 592 | IPR013083 | Zinc finger, RING/FYVE/PHD-... | ||
| ahya_s0011.g216.t1 | SMART | 525 | 585 | IPR001965 | Zinc finger, PHD-type | ||
| ahya_s0011.g216.t1 | SUPERFAMILY | 548 | 587 | IPR011011 | Zinc finger, FYVE/PHD-type | ||
| ahya_s0011.g216.t1 | Pfam | 551 | 584 | ||||
| ahya_s0011.g216.t1 | ProSiteProfiles | 578 | 708 | IPR034732 | Extended PHD (ePHD) domain | ||
| ahya_s0011.g216.t1 | Pfam | 597 | 707 | ||||
| ahya_s0011.g216.t1 | Gene3D | 637 | 717 | IPR013083 | Zinc finger, RING/FYVE/PHD-... | ||
| ahya_s0011.g216.t1 | SMART | 651 | 708 | IPR001965 | Zinc finger, PHD-type | ||
| ahya_s0011.g216.t1 | Gene3D | 718 | 775 | ||||
| ahya_s0011.g216.t1 | SMART | 720 | 777 | IPR002999 | Tudor domain | ||
| ahya_s0011.g216.t1 | SUPERFAMILY | 722 | 775 | ||||
| ahya_s0011.g216.t1 | CDD | 725 | 769 | ||||
| ahya_s0011.g216.t1 | Pfam | 726 | 833 | IPR032770 | Domain of unknown function ... | ||
| ahya_s0011.g216.t1 | Gene3D | 776 | 839 | ||||
| ahya_s0011.g216.t1 | SUPERFAMILY | 781 | 835 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g216.t1 | sp|Q8VCD7|KDM4C_MOUSE | Lysine-specific demethylase 4C | 0.0 |
| ahya_s0011.g216.t1 | sp|Q91VY5|KDM4B_MOUSE | Lysine-specific demethylase 4B | 0.0 |
| ahya_s0011.g216.t1 | sp|Q9H3R0|KDM4C_HUMAN | Lysine-specific demethylase 4C | 0.0 |
| ahya_s0011.g216.t1 | sp|Q8BW72|KDM4A_MOUSE | Lysine-specific demethylase 4A | 0.0 |
| ahya_s0011.g216.t1 | sp|O75164|KDM4A_HUMAN | Lysine-specific demethylase 4A | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g216.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g216.t1 tgctaagtctaaatttgtgtcacagcagtccctaacaaacaacagaagaaaaaagattacttgcggtggcaacggaaaga aatttcggcacttccttgacattcacacgctggaatgggatatcaggaaattgccttattcacgctttttgatttgtttg agggtttcttgtcttgagacggacaatgcactttgagtgagactgcaacataggggaccgacgtcatggctgcacaagaa agcaacaaaatcatggtctttcgcccgacttttgacgagtttaaagacttctcagcttatattcgaaagatggaagaaat gggagctcacagggctggcgtagctaaggtcatccctccaaaggaatgggtgccaagaaaaagttatgaagagatagatg taacaattccagcacctatacttcaagttgtttccggaacacaagggctttatcagctgtttaatgttcagaagaaagcc atgtctttaactgaattcaagaaacttgccaacagtgaaaaacacaaaccaccaactggcgatcctgatgagattgagag aaagtactggaaaaatgcaacatttaacaatccagtttatgcagcagacatcccaggcactatctatgatgagggtgtga aagagtggaacattggaaaactaggaactattcttgacctaatagaagatgagtatggagtgcatattgaaggtgttaac acaccttatctttactttggcatgtggaaagccacttttgcctggcacacagaagatatggatttatacagcatcaacta tttacattttggcgctcctaaaacatggtatgctgttcctccggaacatggtcagcgtttggaaaggcttgccgctggtt tctttcctggaagtttccaaagctgctctcaatttctgcgtcacaaaatgaccatcatttcccctcaagttctacgaaag ttttcaatcccttatgacaaggtcacacaagaagctggagaattcatgattacttttccatatggttatcactgtggctt caacaatggattcaattgtgctgaatcgactaactttgcatctgagagatggattgattttgggaagagagcacaagtgt gtatgtgtaaaaaagacactgtgaagatctgcatggacatgtttgtaaagacataccagccagatcaatgggatgaatac cagagaaacaaacagaaggatagcagtgacagtgaagatgaagcagatgacgcaaggaaggacagccaggaaatgaagga gggcaaagatgaaattaaaaagaaactaaaattatctgaccttacaatagagatagatgacaatattccgctctccaaag tgaaagaattattagcaagggagtcatcaaagcccctaaaggggtcagcaagtaagagacagccattgttttcaaagtca gttacagttcccagcagtgctcgaagacggagaaaaatggaggagacaaagaaacagaaaggccgtagacatcttcattc taagagcactgtgtcaagtaggattctctcaagtgttctacaaggactctggaatgatcagcttcccaatttcgagctgg aacgggcttttaatgtggtttcctcacaattagagcctcactgttcaatctgtagcttcttctcaacttcagaggtgcca tctcagagtgatctactgtcacatcttggagaaaatcttcaccactctctgagcagtctgcttgaacagtcatctgactc atctaaatttatgccatcagtacccagagtgcctgagatctgctttatgtcagacgactcctcccctgagagtatgagtt catggctggaccataagctcagctcagatacaagaagccctctcctgagatgtaacttgtgccaactgcttgttcatgca agttgctatggggtgtctgatgttccgactgatggtaaatggaaatgtcaaaggtgctcacaggaagatgcaaagaatgt tgaaatcagttattgttcactgtgtagacttggtggaggagctcttaagaggactacagaccacaggtgggcccatgttg gttgtgctgtggcgatgcctgaagtcttcttcacagatgtgaacctgagagatggtattaacacaagtcaaatcagctct gcaagaaggaaacttaagtgtttctactgtaaaacaagttcagcacagaaggaaaatggtgcatgtgttcagtgttgcgc gggtaaatgtgcagtatctttccatgtcacctgccttttgttggccgggtttagtctggagccgaatgactggccgcaac ccacagaaacctactgcgagaggcatcagaggacaaggttcaaaggaaaacagcgggattattccactatccactctgga gaatctgtcattgctaagcataagaatggaagatattaccgtggagtggtacaagataccacttcagaggagtactacat ggtgtcatttggtgatgggacatactgtgataacttgccaccaactgacattgtgagccatgacacctcaaagggtgata ttcctgtcagcagtgtggtaacagtgaaatggggagatgttgaagaagagctattcacagccaaagttacaggccgaaag atcagtgtcacttatcagattgaatttgaagatgattcttggttgaatgtgcgtcgggatgacgtgtacaaaactagcga agaacttccacccaaagtacagcagcgactgtccttagcaacagagacggccaatctttcttactgggatgacgttcctg attacagggctaaacgaccacgaaaacaaaacccacgctttttgtagaggcaaaccgtttgtttgttactgagaattgtg gccccttggaaacagtttttcataataatgactgcaatttatacatcagaaaatgttttgccacatgtcgttaactttca tatttgttcatgctgacagcctttttcgtttcattgtcttgagccccttgcaatttttcttctcacaatctaattcacca aagtcaattatattagatacttgagaggtaacatctttggttgcattacatatcagtactgtcaaacagcacaggcccat tgttattatttttgatattttttaccacatggaatccagaacctgtcatttaatttcaaatcgtatatttgtacatgtct gtagaaagatcacaatctatgtgacaccattcttatccagtcaaggcttggccagtaacatagcaggtgtagaaaaagat acacataaacataaaacagtacaacacaaataatcttgactttctgtagtaagaggcccattactggtgcagtctggggg taatacctgcaagaattcatccccaagtaacaacctttgttaggagaatatcagatttaagtgaactcaaagcatcattg ctgcatatgctaagtgactgaacgtgacggttataattttctgatttctggctgttatttatgaatgcctatttaaagag aatgtcgtagtaaggagtatttatttcattatcacttttgtaagtaagacaccttcagaaaagtgccacttattttatgt tgccttgagtgagcatttttgtgcaaagctattaaattttgtcacttttattgactgttgttctttatctttttatcaca aattaataaatgtttacactgtaa |
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Protein
| Protein ID | ahya_s0011.g216.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g216.t1 MAAQESNKIMVFRPTFDEFKDFSAYIRKMEEMGAHRAGVAKVIPPKEWVPRKSYEEIDVTIPAPILQVVSGTQGLYQLFN VQKKAMSLTEFKKLANSEKHKPPTGDPDEIERKYWKNATFNNPVYAADIPGTIYDEGVKEWNIGKLGTILDLIEDEYGVH IEGVNTPYLYFGMWKATFAWHTEDMDLYSINYLHFGAPKTWYAVPPEHGQRLERLAAGFFPGSFQSCSQFLRHKMTIISP QVLRKFSIPYDKVTQEAGEFMITFPYGYHCGFNNGFNCAESTNFASERWIDFGKRAQVCMCKKDTVKICMDMFVKTYQPD QWDEYQRNKQKDSSDSEDEADDARKDSQEMKEGKDEIKKKLKLSDLTIEIDDNIPLSKVKELLARESSKPLKGSASKRQP LFSKSVTVPSSARRRRKMEETKKQKGRRHLHSKSTVSSRILSSVLQGLWNDQLPNFELERAFNVVSSQLEPHCSICSFFS TSEVPSQSDLLSHLGENLHHSLSSLLEQSSDSSKFMPSVPRVPEICFMSDDSSPESMSSWLDHKLSSDTRSPLLRCNLCQ LLVHASCYGVSDVPTDGKWKCQRCSQEDAKNVEISYCSLCRLGGGALKRTTDHRWAHVGCAVAMPEVFFTDVNLRDGINT SQISSARRKLKCFYCKTSSAQKENGACVQCCAGKCAVSFHVTCLLLAGFSLEPNDWPQPTETYCERHQRTRFKGKQRDYS TIHSGESVIAKHKNGRYYRGVVQDTTSEEYYMVSFGDGTYCDNLPPTDIVSHDTSKGDIPVSSVVTVKWGDVEEELFTAK VTGRKISVTYQIEFEDDSWLNVRRDDVYKTSEELPPKVQQRLSLATETANLSYWDDVPDYRAKRPRKQNPRFL |
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