Gene
| Gene Model ID | ahya_s0011.g217 |
|---|---|
| Locus | sc0000011 : 4163329 ... 4179978 : + |
| To GenomeBrowser | sc0000011:4163329..4179978 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g217.t1 | 1 | 1 | DUF3808 | 28 | 488 | 0.0 | 434.0 | 0.0 | 0.0 | 434.0 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g217.t1 | PANTHER | 18 | 572 | ||||
| ahya_s0011.g217.t1 | PANTHER | 18 | 572 | IPR019412 | Outer membrane protein Iml... | ||
| ahya_s0011.g217.t1 | Pfam | 28 | 488 | IPR019412 | Outer membrane protein Iml... | ||
| ahya_s0011.g217.t1 | Gene3D | 219 | 593 | IPR011990 | Tetratricopeptide-like heli... | GO:0005515 | |
| ahya_s0011.g217.t1 | SUPERFAMILY | 275 | 355 | IPR011990 | Tetratricopeptide-like heli... | GO:0005515 | |
| ahya_s0011.g217.t1 | SUPERFAMILY | 481 | 549 | IPR011990 | Tetratricopeptide-like heli... | GO:0005515 | |
| ahya_s0011.g217.t1 | Coils | 532 | 552 | ||||
| ahya_s0011.g217.t1 | Coils | 559 | 579 | ||||
| ahya_s0011.g217.t1 | MobiDBLite | 572 | 652 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g217.t1 | sp|Q5XHH9|TT39B_XENLA | Tetratricopeptide repeat protein 39B | 0.0 |
| ahya_s0011.g217.t1 | sp|Q28DB0|TT39B_XENTR | Tetratricopeptide repeat protein 39B | 0.0 |
| ahya_s0011.g217.t1 | sp|A2ACP1|TT39A_MOUSE | Tetratricopeptide repeat protein 39A | 0.0 |
| ahya_s0011.g217.t1 | sp|Q95LT8|TT39B_MACFA | Tetratricopeptide repeat protein 39B | 0.0 |
| ahya_s0011.g217.t1 | sp|Q8BYY4|TT39B_MOUSE | Tetratricopeptide repeat protein 39B | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g217.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g217.t1 ataacttttctccacagaacgccttaattttatcgttaagcttccttatttagtcgagaaataatcatatacaagttcta agctttaaaattgacgaaatggaatcgaaagaaagcaccaagccacggggtgacatggatgaaaaggtactggctgatgc tattaagatgacaaatgttgccttcaacctctgtttgtcaaataaatttgttcaagcacaggcaaaacttgaaccttggg tgaatgaaagcatgtaccatgcactgggatacagcacaatcatgtatcttcaagctatgatgacatttgaacctcaatct attcaacaagctagcaacagcaataaaattgcattggatgtttgtgaaagacacagaagaaaacaaacgtggacacaatc atttaccagctggatttggaatccctatgataatttaaaggaagttgaaaggcatgcagagctttgctatgcagaatgtc ttttcatgagggctatgctaacatttattcaggatgaaaaccttgtcagctttataaaaggggctctgagaatcagaagt gcttatcagacatataagacttgcctggacatgataacacaccaaccggcatccttgcttcactcagcacaaagaatgga ctttgaaggaggtgtccaccttggtattggaggcttcaatttgatgctatccttacttccagcaaagattatcaagttat tggagtgggttggtttttcaggagacaagttgaaaggtttagaacatttggagcgaggctgcctcagcaagaatctgagg tcaccaatgtgtgctatggtgcttctggcctaccatagtgtcatcacctattaccttgggaatggtgaaggtgatgttgt gtatgctgaggaaattcttcagccacaacttaaagcatttccaaagggggcaatatttttgtactatgccgcgcgcataa aacaaattcaaggaaagcttgatgaggccattgaaaagtacaatgactcaatttcttctcaatcagaatggaaacagttt caccacatttgctactgggaggtgatctggtgttattcgtacagtggagaatggtccagagcatttcactacgcttctgt tctgttggcaggaagcagctggtcgaagaccacgtacatgtatctgaaagcttcgttaagagttatggcaagaataacta accagcaaatagcaaaagaggatgataacggcgaggtagacacagaggaatacatgttcaggcgtcttccagtttacaag cagcgtatcgcagggaagtctattccttttgagaagttttcaatacataaagccaacaagtatctggaacaaaacaatcg gctcttcctacccggattggagctcatattgttgtggaatggattcaaagttcttcatcacaggccagatttagttcaac cgatgcttaatctcgtccaaacatctttagctgaattagaaacaagcagaggagagaatgtcaactacattgacgactgg tgtctaggtactctgcttcaagggatgtgttttcgctgcatgagaaaaacgaaggaggcactggagagcatgcttaacgc tgttaacatgtcaaaagatctggtacaggatttttacctggcccctttcgcatgcgcagaagtgggttttctatacctag aagagggagatcttagtcaagcgaaagagtacttgaacagagcaaggaaagattacgaaaaccacatgctgcagagcaga cttcacttcagaatccactctgctcttcaagaaatcaaacacgtacaaaagcaagttaaagcagcgtctaagcgtaataa caaaacgcagaaatgctccaaagaggataacaacaacagtacttcatcattcggtgaagattcaatggaagactcgtccg atcttgagcgtaaggactcaagttcctcatttgaaaccgctcctgaagactcaggagctgaagacgaagggaatctgggg ctggttgacgaagagggcactctaaaccaatcaactctaagggaaacggcagtgtgaatagttgtatgctattcggtttt tcaagtcttttaattggcaaatgaattattcaccaatgctgtcatgtactcaactgtaaaataattacctttcagaattc aaaaagtttcagtcctaagcatttcattcatatcaaaaatgaaaaaaacgaatttgtcatttttaagttgtgaatacgcg catgcatattgacgactttggtgtgaactccctgggtaacctggccacttcagtaaacttgttcacatgttgtacgcggt gaaagtgtttcgctaaagaacatcgacgcacagcaagcaaggtaacactatacatacacagttaaaatgtttcacatttt tcagccatctcgaatctcttgctaccacattcacaactttgcccatagagccctttgtattgtcgttgtttggaaaaatt gttgcgaatttgttttgtagataaattgtagtaaaactgttaagaatttgttttgtagataaatgtagagtttaccatcc agacaaacgagtactacagttcttcacgaattttagaagttattcaaaaatagattttctcgttgcaaataagtatttaa aatggccctttaatgattgcgcttctttttattcttcgtgaaaagtgtgaaacgcatacattgaggaataaaatggccag tttgaa |
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Protein
| Protein ID | ahya_s0011.g217.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g217.t1 MESKESTKPRGDMDEKVLADAIKMTNVAFNLCLSNKFVQAQAKLEPWVNESMYHALGYSTIMYLQAMMTFEPQSIQQASN SNKIALDVCERHRRKQTWTQSFTSWIWNPYDNLKEVERHAELCYAECLFMRAMLTFIQDENLVSFIKGALRIRSAYQTYK TCLDMITHQPASLLHSAQRMDFEGGVHLGIGGFNLMLSLLPAKIIKLLEWVGFSGDKLKGLEHLERGCLSKNLRSPMCAM VLLAYHSVITYYLGNGEGDVVYAEEILQPQLKAFPKGAIFLYYAARIKQIQGKLDEAIEKYNDSISSQSEWKQFHHICYW EVIWCYSYSGEWSRAFHYASVLLAGSSWSKTTYMYLKASLRVMARITNQQIAKEDDNGEVDTEEYMFRRLPVYKQRIAGK SIPFEKFSIHKANKYLEQNNRLFLPGLELILLWNGFKVLHHRPDLVQPMLNLVQTSLAELETSRGENVNYIDDWCLGTLL QGMCFRCMRKTKEALESMLNAVNMSKDLVQDFYLAPFACAEVGFLYLEEGDLSQAKEYLNRARKDYENHMLQSRLHFRIH SALQEIKHVQKQVKAASKRNNKTQKCSKEDNNNSTSSFGEDSMEDSSDLERKDSSSSFETAPEDSGAEDEGNLGLVDEEG TLNQSTLRETAV |
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