Gene
| Gene Model ID | ahya_s0011.g223 |
|---|---|
| Locus | sc0000011 : 4243989 ... 4248712 : + |
| To GenomeBrowser | sc0000011:4243989..4248712 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g223.t1 | 2 | 1 | EF-hand_7 | 11 | 73 | 2.9e-22 | 78.7 | 3.4e-15 | 4.3e-12 | 46.1 |
| ahya_s0011.g223.t1 | 3 | 1 | EF-hand_1 | 11 | 39 | 1.7e-21 | 74.0 | 3.5e-10 | 4.4e-07 | 28.9 |
| ahya_s0011.g223.t1 | 2 | 1 | EF-hand_6 | 12 | 40 | 2.9e-18 | 64.1 | 1.4e-11 | 1.8e-08 | 33.6 |
| ahya_s0011.g223.t1 | 1 | 1 | EF-hand_5 | 13 | 36 | 1.3e-11 | 43.3 | 9.8e-07 | 0.0012 | 18.1 |
| ahya_s0011.g223.t1 | 2 | 1 | EF-hand_8 | 14 | 32 | 2.1e-15 | 56.1 | 9.3e-06 | 0.012 | 15.3 |
| ahya_s0011.g223.t1 | 1 | 1 | EF-hand_9 | 15 | 74 | 4.6e-09 | 36.3 | 9.4e-09 | 1.2e-05 | 25.4 |
| ahya_s0011.g223.t1 | 2 | 2 | EF-hand_8 | 25 | 75 | 2.1e-15 | 56.1 | 3.4e-12 | 4.3e-09 | 35.9 |
| ahya_s0011.g223.t1 | 3 | 2 | EF-hand_1 | 48 | 73 | 1.7e-21 | 74.0 | 2.2e-07 | 0.00028 | 20.1 |
| ahya_s0011.g223.t1 | 2 | 2 | EF-hand_7 | 85 | 142 | 2.9e-22 | 78.7 | 3.4e-12 | 4.3e-09 | 36.5 |
| ahya_s0011.g223.t1 | 2 | 2 | EF-hand_6 | 85 | 110 | 2.9e-18 | 64.1 | 4.9e-07 | 0.00061 | 19.4 |
| ahya_s0011.g223.t1 | 3 | 3 | EF-hand_1 | 86 | 111 | 1.7e-21 | 74.0 | 5.1e-08 | 6.4e-05 | 22.1 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g223.t1 | Gene3D | 1 | 34 | ||||
| ahya_s0011.g223.t1 | SUPERFAMILY | 2 | 145 | IPR011992 | EF-hand domain pair | ||
| ahya_s0011.g223.t1 | PANTHER | 3 | 144 | ||||
| ahya_s0011.g223.t1 | PANTHER | 3 | 144 | ||||
| ahya_s0011.g223.t1 | ProSiteProfiles | 7 | 42 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | Pfam | 11 | 73 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | SMART | 11 | 39 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | CDD | 11 | 72 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | ProSitePatterns | 20 | 32 | IPR018247 | EF-Hand 1, calcium-binding ... | ||
| ahya_s0011.g223.t1 | Gene3D | 35 | 74 | ||||
| ahya_s0011.g223.t1 | ProSiteProfiles | 43 | 78 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | SMART | 47 | 75 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | ProSitePatterns | 56 | 68 | IPR018247 | EF-Hand 1, calcium-binding ... | ||
| ahya_s0011.g223.t1 | Gene3D | 75 | 107 | ||||
| ahya_s0011.g223.t1 | ProSiteProfiles | 80 | 115 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | SMART | 84 | 112 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | Pfam | 85 | 142 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | Gene3D | 108 | 148 | ||||
| ahya_s0011.g223.t1 | ProSiteProfiles | 116 | 151 | IPR002048 | EF-hand domain | GO:0005509 | |
| ahya_s0011.g223.t1 | MobiDBLite | 145 | 168 |
Transcript
| Transcript ID | ahya_s0011.g223.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g223.t1 caacattgtacgttttcattattcattgcttaacgacaaatctttatctgtctgaaaatcaactgaatttctgtcgattg caattaactcgtaatggaaaaattgtccaaggagcaaattgaagaatacaaagatgccttctatttgtttgaccgagata acaatggatacattacaaccaaagaacttggctctgttatgcggacattgggattcaatccaaatgaagagaatttacaa cagatgatattcactgttgattacgatggggacgggatgctcaatttggaagaatatatccagctgatggagcagcaaaa gacccctgaagagatagaggacaacattgtacaagcttttcgggtttttgattgtgataacaaaggttacattgaatcag cagacctgagagagttgttggagaatatggattggaaaatttctgatgatgaagttaaagatttaattaacaggaccaac ttgcgcgaagatcgacgaataagcatagaggaattcgcgctgcttgtggaacctgatggcctaccacctgcacctcctcc tgatggtgagaacaacaacgaagacgatgatttcttgtaacaacttacatctaatgacaaccttcaactcttcgtgattg tgaactcatcttggaatcagttggctccataaaaatgcgagcaaaggctagctcttgatttccaaagcttgagaattctt attaagtgacgaggcacttatttaaaagaaaccacaagaaataatttccaatagtttaatcccttgactctgaagtaatt gaagtcagttattgaaaccaaccaagagaaatttcacttaaacatacgtagaaatcaaactaatgctcaatgtaagcgac cattccaacatgactctaaagagaaattcttcaataatctaactctgatctccctagtacgggaaaagtcccaatctgat taacttttagataaattttaacacatatttgtctattcaatgccggtttcgtgatgtcagatggcagtttacagttaaca caccctctccttcccaagcaatggtcaacgggagcttgcttcgcgaccttctagcccaatcgttgatctatcttcatcgc cagtcgtttctcgactcttaacattgggattttcaaatcgtcccagcatccgagtctgatctgaagggattccttggtta ccctaaggaccaacttaattgtttcctccgacttttcgagtgatatcccgtcctcgatttttgatgccatggctggaatt cagctttgcccaacttagccaagttagttttttggtttgacaatgaatatgcatacagccatcgtgttgtggtcttgatt gaatcgtacggccaaaaagaaagaaaggaatgtttctcggggaagggagggacgtcttgaaaattgggaattacccgttt tattcttgtgaaaaggggatttatactggaactgatgtttgaattaggttgaattaggaaaaagccaaccttttttatct aactttgtaaccgtatattcgatgatccctacgaaaatacccataagtttgccagactgtgaaattgaagttctaattta tgaagcagttaagagattttcaagcatccgcgcaaatgagtggcattgctcatgcttcttaactgaaatagtgtgtgaag atcagctgagcaatccaaccctcgtgttatttcaatattaacaacacagctgttaaaatgatggtgcgagtgacgaaaac tgtcatctcctacgagtgttcttcagcttaagaagaaaatgtgatcttcaaacatgaatgcaaattcaaacacatctttc tcccggcgagagatatgatcttgaaatattttttttaacgtgggcgaaaagttaatgtacgaacttttaaaagagtactt gatcaaaatgatctgaaaaataaacactaacaaactga |
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Protein
| Protein ID | ahya_s0011.g223.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g223.t1 MEKLSKEQIEEYKDAFYLFDRDNNGYITTKELGSVMRTLGFNPNEENLQQMIFTVDYDGDGMLNLEEYIQLMEQQKTPEE IEDNIVQAFRVFDCDNKGYIESADLRELLENMDWKISDDEVKDLINRTNLREDRRISIEEFALLVEPDGLPPAPPPDGEN NNEDDDFL |
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