Gene
| Gene Model ID | ahya_s0011.g231 |
|---|---|
| Locus | sc0000011 : 4277230 ... 4281358 : - |
| To GenomeBrowser | sc0000011:4277230..4281358 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g231.t1 | 2 | 1 | PIF1 | 195 | 388 | 0.0 | 221.4 | 0.0 | 0.0 | 159.5 |
| ahya_s0011.g231.t1 | 1 | 1 | AAA_30 | 195 | 389 | 1.0e-18 | 67.6 | 1.7e-21 | 1.6e-18 | 67.0 |
| ahya_s0011.g231.t1 | 2 | 2 | PIF1 | 410 | 491 | 0.0 | 221.4 | 1.9e-19 | 1.8e-16 | 60.2 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g231.t1 | Hamap | 15 | 605 | IPR010285 | DNA helicase Pif1-like | GO:0000723|GO:0003678|GO:00... | |
| ahya_s0011.g231.t1 | PANTHER | 125 | 603 | ||||
| ahya_s0011.g231.t1 | PANTHER | 125 | 603 | ||||
| ahya_s0011.g231.t1 | Gene3D | 156 | 366 | ||||
| ahya_s0011.g231.t1 | SUPERFAMILY | 190 | 368 | IPR027417 | P-loop containing nucleosid... | ||
| ahya_s0011.g231.t1 | Pfam | 195 | 388 | IPR010285 | DNA helicase Pif1-like | GO:0000723|GO:0003678|GO:00... | |
| ahya_s0011.g231.t1 | SUPERFAMILY | 317 | 591 | IPR027417 | P-loop containing nucleosid... | ||
| ahya_s0011.g231.t1 | Gene3D | 367 | 576 | ||||
| ahya_s0011.g231.t1 | Pfam | 410 | 491 | IPR010285 | DNA helicase Pif1-like | GO:0000723|GO:0003678|GO:00... |
Transcript
| Transcript ID | ahya_s0011.g231.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g231.t1 tacgaaatcaaaagttttctgaaggaaatatggaagctagtgagctagaatgcagtttaacagtagagaaccttaattcg aatggaattgttacaaaaagacggtgttacaaaagcatcacagtggtgttaggcagagatgaatttcgcgacatagctct tcgaatcgttagtagccaatctccgttaggaaagccgttcctcttgaaggatataagtatccacaagcgatttgcacacg aaggaaaagcgacgattaagcttttaacccagaagcttcaaatcatgttttcgaactgtccaccaaatcagctgatagct tttttgaaatgtttatctttgaaactgagtcagagcaaacaaaatggactcacttgtaatagaaggcgtatgttaagtga taagcctcgatcatttgagaacataagtccactaacagacaaagatttcacggagaccacgagaagtaagaagcgacctc tggatgataatagtgcgataaccccgaagagaattaaaacgtcggggaaagaaaaccagttgggagcaaattgcgagagt agccaggcacgcaaacgtcttaacatcattagttctcttcaagcaaactttacagctgagcaaatggcggtgataaatgc agtgaaggcaggaaggagtgttttcttcactggcagtgcgggaacggggaagtcgtatctgctgaagcgtttgctcagca tgctaccaccgcagagtacatttgtcacagcaagcactggtgtagcagcttgtcatatcggaggaactacactacatgca tttgcaggcataggaagtggcagtgcacctcttgcccaatgtgtggaattagcttcacgccctggccatgcacaacagtg gagaacctgcaagcaccttatcattgatgaaatttcaatggtggaatcttcatacttcaataaacttgaagcagttgcca gagctgtcaggaaaaaagattgtccctttggtggagtgcagttaatcttatctggggatttcttacaacttcccccagtg gcaaaacacttggaaaagaaaaagttctgtttccaggcagaatgttggggtgattgtgttcatacaactattgaactcaa gcaagtctacagacaaaaagatcctctctttatctccattcttcaaaatgtccgtgttggaatttgccctgatgcacttg tctcaaggttgaccaaaacaaggaatcagtcaattgaacatgacggaataatggccacaaagctctgcacacacaaagaa aatgtcaaccagatcaatgagattcacctgtcaaagctgccatgtgaaaagaaagtgttctatgctagtgacagtgataa cagtatgtctgcaatgattgacaagcaggttcctgttggtgaaacacttgagttgaaaaaaggagcacaggttatgttgg ctaaaaacttaaatttgtctaaaggacttgtcaatggagcacgagggattgtaacacaatttgattcaggaaatgcaggt tatccagtggtcaagtttatgtcaggtcttgaacaggtcattggtcctgaaaaatgggtggtgaaggcacctggaggagc tacaatcactcgtagacaattacctctcaaattagcttgggctgtctctattcataaaagccagggtatgacactagact gtgttgaaatctccctgtcaagagtctttgaatatggacaagcatatgtagctctttcaagagcaagaagcttacaggga ttacgagtcttggattttgacagcaagtgtgtgagagcacatccggatgttctcagatattatgcaagattacaacgaga tgcaaagatgatgaaaagccttaactatgatgacaaggaaaatacttgccctcattagaaaaacgtgtataaagaactac caaacattttaaaagattttagagagtatacatagttttaagtaactgctgctcatttgcaagaaacattttgtgttaag cttataatactgaaatcagtgtcaaacaaagcatactaagttcaggaatttgaaatgatcgatatcaatgataccataat ttttgtacttttaaaacgattaggtaaaccaaaggacagtatttctttgtttaagggcatttatttgatccataaatttt tgacagagcaaaccaccagttttaacatcaatgaaaaatcaattt |
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Protein
| Protein ID | ahya_s0011.g231.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g231.t1 MEASELECSLTVENLNSNGIVTKRRCYKSITVVLGRDEFRDIALRIVSSQSPLGKPFLLKDISIHKRFAHEGKATIKLLT QKLQIMFSNCPPNQLIAFLKCLSLKLSQSKQNGLTCNRRRMLSDKPRSFENISPLTDKDFTETTRSKKRPLDDNSAITPK RIKTSGKENQLGANCESSQARKRLNIISSLQANFTAEQMAVINAVKAGRSVFFTGSAGTGKSYLLKRLLSMLPPQSTFVT ASTGVAACHIGGTTLHAFAGIGSGSAPLAQCVELASRPGHAQQWRTCKHLIIDEISMVESSYFNKLEAVARAVRKKDCPF GGVQLILSGDFLQLPPVAKHLEKKKFCFQAECWGDCVHTTIELKQVYRQKDPLFISILQNVRVGICPDALVSRLTKTRNQ SIEHDGIMATKLCTHKENVNQINEIHLSKLPCEKKVFYASDSDNSMSAMIDKQVPVGETLELKKGAQVMLAKNLNLSKGL VNGARGIVTQFDSGNAGYPVVKFMSGLEQVIGPEKWVVKAPGGATITRRQLPLKLAWAVSIHKSQGMTLDCVEISLSRVF EYGQAYVALSRARSLQGLRVLDFDSKCVRAHPDVLRYYARLQRDAKMMKSLNYDDKENTCPH |
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