Acropora hyacinthus ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDahya_s0011.g232
Locus sc0000011 : 4282428 ... 4308258 : -
To GenomeBrowser sc0000011:4282428..4308258
Genes list of scaffold sc0000011

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
ahya_s0011.g232.t1 4 1 Ig_3 4 74 6.30584e-44 148.4 2.1e-15 1.6e-12 47.7
ahya_s0011.g232.t1 3 1 I-set 9 87 7.7e-35 118.7 7.7e-17 6.0e-14 51.8
ahya_s0011.g232.t1 1 1 ig 18 84 1.1e-16 60.7 1.8e-11 1.4e-08 34.7
ahya_s0011.g232.t1 4 1 Ig_2 19 87 2.4e-40 136.5 2.0e-12 1.5e-09 37.8
ahya_s0011.g232.t1 4 2 Ig_3 96 164 6.30584e-44 148.4 5.0e-11 3.9e-08 33.7
ahya_s0011.g232.t1 3 2 I-set 96 167 7.7e-35 118.7 1.7e-06 0.0013 18.6
ahya_s0011.g232.t1 4 2 Ig_2 98 174 2.4e-40 136.5 1.2e-12 9.3e-10 38.5
ahya_s0011.g232.t1 4 3 Ig_3 182 249 6.30584e-44 148.4 7.9e-14 6.1e-11 42.6
ahya_s0011.g232.t1 4 3 Ig_2 182 262 2.4e-40 136.5 6.7e-10 5.2e-07 29.7
ahya_s0011.g232.t1 3 3 I-set 182 254 7.7e-35 118.7 3.7e-09 2.9e-06 27.1
ahya_s0011.g232.t1 4 4 Ig_3 267 337 6.30584e-44 148.4 4.5e-08 3.5e-05 24.2
ahya_s0011.g232.t1 4 4 Ig_2 267 341 2.4e-40 136.5 2.1e-08 1.6e-05 24.9
ahya_s0011.g232.t1 3 1 fn3 357 439 3.1e-38 129.8 3.2e-14 2.5e-11 43.6
ahya_s0011.g232.t1 3 2 fn3 452 532 3.1e-38 129.8 1.1e-12 8.7e-10 38.7
ahya_s0011.g232.t1 3 3 fn3 679 757 3.1e-38 129.8 1.3e-13 1.0e-10 41.6
ahya_s0011.g232.t1 2 1 Y_phosphatase 917 1149 0.0 487.8 0.0 0.0 253.7
ahya_s0011.g232.t1 1 1 Y_phosphatase3 1040 1109 1.2e-08 35.0 2.1e-06 0.0016 18.3
ahya_s0011.g232.t1 1 1 DSPc 1063 1133 3.6e-08 33.2 1.2e-06 0.00093 18.9
ahya_s0011.g232.t1 2 2 Y_phosphatase 1209 1438 0.0 487.8 0.0 0.0 231.8

Results of InterPro Scan
Gene Model ID Analysis Start End i_acc i_desc GO Pathway
ahya_s0011.g232.t1 SUPERFAMILY 4 92 IPR036179 Immunoglobulin-like domain ...
ahya_s0011.g232.t1 ProSiteProfiles 5 86 IPR007110 Immunoglobulin-like domain
ahya_s0011.g232.t1 Gene3D 7 107 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 Pfam 9 87 IPR013098 Immunoglobulin I-set
ahya_s0011.g232.t1 SMART 12 88 IPR003599 Immunoglobulin subtype
ahya_s0011.g232.t1 SMART 18 77 IPR003598 Immunoglobulin subtype 2
ahya_s0011.g232.t1 ProSiteProfiles 91 177 IPR007110 Immunoglobulin-like domain
ahya_s0011.g232.t1 SUPERFAMILY 97 188 IPR036179 Immunoglobulin-like domain ...
ahya_s0011.g232.t1 Pfam 98 175 IPR007110 Immunoglobulin-like domain
ahya_s0011.g232.t1 SMART 100 179 IPR003599 Immunoglobulin subtype
ahya_s0011.g232.t1 SMART 106 167 IPR003598 Immunoglobulin subtype 2
ahya_s0011.g232.t1 Gene3D 108 181 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 SUPERFAMILY 175 264 IPR036179 Immunoglobulin-like domain ...
ahya_s0011.g232.t1 Gene3D 182 237 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 Pfam 182 249
ahya_s0011.g232.t1 ProSiteProfiles 182 262 IPR007110 Immunoglobulin-like domain
ahya_s0011.g232.t1 SMART 188 264 IPR003599 Immunoglobulin subtype
ahya_s0011.g232.t1 SMART 194 252 IPR003598 Immunoglobulin subtype 2
ahya_s0011.g232.t1 CDD 202 254
ahya_s0011.g232.t1 Gene3D 238 263 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 SUPERFAMILY 262 354 IPR036179 Immunoglobulin-like domain ...
ahya_s0011.g232.t1 Gene3D 264 351 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 ProSiteProfiles 267 349 IPR007110 Immunoglobulin-like domain
ahya_s0011.g232.t1 SMART 275 351 IPR003599 Immunoglobulin subtype
ahya_s0011.g232.t1 SMART 281 340 IPR003598 Immunoglobulin subtype 2
ahya_s0011.g232.t1 SMART 352 437 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 Gene3D 352 446 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 CDD 354 447 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 ProSiteProfiles 354 450 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 SUPERFAMILY 355 488 IPR036116 Fibronectin type III superf... GO:0005515
ahya_s0011.g232.t1 Pfam 357 439 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 Gene3D 447 542 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 SUPERFAMILY 450 594 IPR036116 Fibronectin type III superf... GO:0005515
ahya_s0011.g232.t1 SMART 451 537 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 CDD 451 544 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 Pfam 452 532 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 ProSiteProfiles 453 550 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 Gene3D 543 673 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 SMART 549 658 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 SUPERFAMILY 656 759 IPR036116 Fibronectin type III superf... GO:0005515
ahya_s0011.g232.t1 PANTHER 663 719
ahya_s0011.g232.t1 PANTHER 663 719
ahya_s0011.g232.t1 Gene3D 674 782 IPR013783 Immunoglobulin-like fold
ahya_s0011.g232.t1 SMART 678 763 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 CDD 678 768 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 Pfam 679 757 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 ProSiteProfiles 680 776 IPR003961 Fibronectin type III GO:0005515
ahya_s0011.g232.t1 PANTHER 780 1448
ahya_s0011.g232.t1 PANTHER 780 1448
ahya_s0011.g232.t1 Gene3D 868 1159 IPR029021 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 SUPERFAMILY 879 1188 IPR029021 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 SMART 893 1154 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 ProSiteProfiles 894 1152 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 Pfam 917 1149 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 CDD 920 1151
ahya_s0011.g232.t1 PRINTS 946 953 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 PRINTS 962 982 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 PRINTS 1049 1066 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 SMART 1050 1151 IPR003595 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 ProSiteProfiles 1072 1143 IPR000387 Tyrosine specific protein p... GO:0016311|GO:0016791
ahya_s0011.g232.t1 PRINTS 1088 1106 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 ProSitePatterns 1091 1101 IPR016130 Protein-tyrosine phosphatas... GO:0004725|GO:0016311
ahya_s0011.g232.t1 PRINTS 1119 1134 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 PRINTS 1135 1145 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 SUPERFAMILY 1156 1440 IPR029021 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 Gene3D 1172 1450 IPR029021 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 SMART 1183 1444 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 ProSiteProfiles 1184 1442 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 Pfam 1209 1438 IPR000242 PTP type protein phosphatase GO:0004725|GO:0006470
ahya_s0011.g232.t1 CDD 1212 1438
ahya_s0011.g232.t1 SMART 1339 1441 IPR003595 Protein-tyrosine phosphatas...
ahya_s0011.g232.t1 ProSiteProfiles 1358 1433 IPR000387 Tyrosine specific protein p... GO:0016311|GO:0016791
ahya_s0011.g232.t1 ProSitePatterns 1381 1391 IPR016130 Protein-tyrosine phosphatas... GO:0004725|GO:0016311

Blast Hit to nr / sp
query Subject ID Subject Name evalue
ahya_s0011.g232.t1 sp|P18052|PTPRA_MOUSE Receptor-type tyrosine-protein phosphatase alpha 0.0

Transcript
Transcript IDahya_s0011.g232.t1
Definition-
>ahya_s0011.g232.t1
tgtgagacttccacctccagtagattcttgtcaccatctgcatggcttttttacttcaaaaccagcttttaaaacaggtt
tcaaactctgaactgtttgctaattttttttgccacctatggtagatcctccaagaattttaactcagttaccacttgag
ctaacctggattgagggcaatagacaagagattaactgtgacgcagatggaaaaccaaagcccagagtaacatggcacaa
agatggcagtgttgtcaaaagtggtcacagaagagccaaactggaatttacatcagttagttacaaagatgaaggatctt
acaaatgtgttgcaaagaatattgggggaaagaaggaaaaacaagtgaaagtcaatgttctttatgctccaaaagagacc
aacatcactactaacctaccacaagacacggttgatgatgggtctatcattaccatcacatgtgaggctcttggaaaccc
tccacctagctataaattcttcatcaatggcaagcctattcaggataaaaaatttgagagatcaggaatcctttcaatca
cagccattggttttaagcaaaggggaatatacagctgtcgtccagagaatgacaggggtacaggaccaatcagtgaagtt
gcagtttatgtgcggtatgcacctagaataactcgtcctcctggcaacaaaattgtggatgaaaataacgcagtaggagt
aagatgtgaagctgaaggatacccaccacctttgataaaatgggtaaaactacttgggaacaaaaatgttgctaatggca
ctaactggttgttacgcagtgctcagcggacagaccaaggaagatacagatgcatagctaccaatggttttggtagagat
gcttttgcagaattcgaaataaatgtgtattttgctccagtaataaacagaacagcatcaagtcaagatgttccagcctg
ggcaggaattcccacaaatttgtcctgtgttgctactgcaaatcctgctcctcgttatgagtggtcaaaggcttctggtg
ttgttgccacctcagagaaaagcggctggctacaggtgacaccacaggaaggagatggatttgaaccatacacgtgtact
gtggaaaacaataaaggctccgatagtatggtcattcggctgataaaagttggtattccagtggttaagctcacggttgt
acgtcgtcaatcagattccctgtttttagaatggctgttgttgtcagatgtagccaccaattcctatatatcacattata
ctttacaataccacaccgatcacagcaatggggggatagaaagaactatccgaatttcttctgaaaagacaaactaccaa
ttacatgacttgcagccgtacacaaaatacactattgagctgtttgcgactaataagcacttctccagtgaaacatctaa
ggtggaagcaatgactactgaagcagcaccaagtcctccaaggaatgtaaaagtgaagatcatcaatggcacagcagtta
atgtgaagtgggaagcccctcttcaccctaatgggcctctgctcttttacacagtttcgtatgataagaaggaatacatt
ccagatggtggcacaaagattttatcagtcttgcccaacattactgaagttgtgattggtgcgctcactccattttcaaa
ttattctatcaaagttaaagttcggaacagtttgactgtaaatgaaagtaaaccagtcactatttcaacaaaaatggcag
ctcccagtgagccattagcctttgaagccaatatgactggtgcccatagtgcgacattatggtggaggaaacctcgtcag
ttgaatggaaagatacttcttttcaagattagaatgcgttggagatataagaatgtgaaaggaacctacagattcattac
aaagaaaattcctgctaaagtgacaccaagagaaagaaggagattacgacgttatatgatggattacagagtgcttcgct
tagaacctgtcagagaaattcaactgacgagaatacaaccttttgccttcatatctgtgcatgtttctgagggaactgga
atcacagagaatgaagttttttggagcccttggtctaacaactacactcttcaaacactggaaggagcccctagtgcccc
aaggaatgtggagctgaaacagaataaaggtgcatctgtgaaagtaacatggcttccacctgagtatcccaatgggatta
ttcagaaatacagaatcatttacagcaataattccatcaaaaactacacagcagaggtcactaaaggattgaagaacact
tctctattttacattctttcgagacttcataaagattccacctaccaaattaatgttcaagcatttactagttttccagg
agaagtgagccctacagtcaggcgtgatattaaaacaccacgagatgtgttagagcaaaataaagttgataccgcatctc
tctatggtggagtatttgctggaattatcgcattcgtttttgtgataatcattgttgcattagtaataagaaatcataga
aaacgacgtgatggcacagacctcagtggtaagcaatatgcagtggctaactcgaacgatagtggcattggagataaaga
atcactggaccgtgttcctggagttaaatgtgtgcaaggcgtgcgtcgaggatctgaagatgttattggtccaggaaaat
ttgttactatcaaaccaattcctattcagaggcttcccgaatactgtgccatcaaccacgcagatagaaataagggattc
agagaagagtttttgtcaatcagagttccaggcagttttacttgggaaaatagccagaagccagagaacaaagcaaagaa
cagattcaatagtatcattccctatgatcatacacgagttacgttaacagagttggaaggaactcctggtagcgattata
tcaacgccaactttattgatggctatgatcatcccttcaagtttattgcaacacaaggccctgtagctaacacatttgga
gacttttggcgtactgtgtgggaacagggcgtttgtgtagtcatcatggtgacaaacatcgtggaaggaggacggatcaa
atgtttgaaatactggccaagtgcaagtccagaaatgtatgggcttgtcctagtttcccctcaaggcgaggaagagcttg
ctgattatgttgtcagaaagttttctatacaaatgatatcaaaatcagctgagcattctgcacgtgaagtaacccagtat
catttcacagcatggccagatcaaggggtccctactcatgctacctcccttctagctttcctgagaaaggtccgtacttc
agtgcctgaggattcaggacctattttaatccactgcagtgctggcgtgggtcggaccgggacttacatagttcttgatg
ctatgcttgatcaaatagctgctgaaggagtggtagatatatatggattcatctcacatattcgtcagcagagaagcttc
atggtgcaaacagaaggacagtacgtttttgttcataacgctctggaggaatatgttacttgcggcagcacagagtttcc
agttagtgacctgccagagagactgcgtattttgaacacggtggatcccgatagtggagactcgctggtggtagcagagt
tcaagaatcttgggcttggagcgtctgacggcgactcattcatcgtggcgtcacgacaagaaaacaagtcgaagaacaga
tacgctatactaccatttgatcgaacaagagtgacgttgtggccttacactggaatggttggatcagactacattaacgc
aagctttgtggacagtttccagcaacgtgaagcgtttattgctactcaggctcctctggagaacacggtcgtggacttct
ggcgaatgacttgggaatatgaggcctactccatagtgatgctgaccacaatgaacgagttacaagagggacaatgcgct
tactatttacctcggagagaagaattcatagtgtatggtttgctcatggtcgaggtggagactgaggaccagagaaatgg
cttctgcagaagacgcctcagagtaacaaacacaaagagtggtgaaattcgcagcatttaccatttccatttcaaggaat
gggcagagagatctatccccttaaatggaatgggtcttcttgatatgatgaagtgtattacacgcgtacaacaacaaaca
ggcaatggaccaatcgtcattcactgcagtgatggtagcggtcgtaccggaacattttgtgctatcaatgttgctctgga
gcgagtgaaattagatggaacaatagatatatttcagacagtccggcgcttgcgtactcaaagacccctgatggtccaga
cagaggaacagtacaagttatgctatgaaatcacgcggctgtttgtggagagcttcaatgactactcagacctcaaataa
tttccagtagaattcgacagctgaatatgccatttcacacccagtcccttctcgttttaacaagatgctaataactggga
atcatttgtgcttttgtacgggttcgtaaacctgtgtttagatttgactcaatctacgtgatttagtcaggtggctaacg
agcgatatggcttcgccaagaagtttaaacactgatggtttttcaagaacgagggaatgaaacacgtcgccggattaaac
agtacagggcgttgttgctaagggtattggatactggctccgataacagaagtgttagttgaggatttccattgcatgcc
cttgatattcaagaattaattttatcaaatgtgtagaatgaaatattttgttgaaaaaaagtacttacgttcgtgagagt
agaaggtgcttaaaaaaatcaaattactctagcctcaactattttcgtaaggaattttttagcgcaaatgaaggtctaaa
ggctttcttcaagaaaactttttccaattaccttattgggtacaatattttcatcgcatggatgatgaaatgcgttctat
tcagtcgctccaagatatatttttgtgccatcagtcacttaactagaaaacactaggtgttgttatgtcttgtgtaaaca
cgcaagaatgttttcgttctttttagaatgcgtcgaacgcacatattctagacgtattgaaacggctgttaatagccgtt
gattttaatgattttccccaatagcctaacaaggcatggttcttttgaattttgaaaaacgaaacaaatcaggtcggtga
agggttgtattatagtttgttaccgttatgatacttgactgttattagttgaacttttgtcatggtaataaaccttacag
tacgta

Protein
Protein IDahya_s0011.g232.t1
Definition-
>ahya_s0011.g232.t1
MVDPPRILTQLPLELTWIEGNRQEINCDADGKPKPRVTWHKDGSVVKSGHRRAKLEFTSVSYKDEGSYKCVAKNIGGKKE
KQVKVNVLYAPKETNITTNLPQDTVDDGSIITITCEALGNPPPSYKFFINGKPIQDKKFERSGILSITAIGFKQRGIYSC
RPENDRGTGPISEVAVYVRYAPRITRPPGNKIVDENNAVGVRCEAEGYPPPLIKWVKLLGNKNVANGTNWLLRSAQRTDQ
GRYRCIATNGFGRDAFAEFEINVYFAPVINRTASSQDVPAWAGIPTNLSCVATANPAPRYEWSKASGVVATSEKSGWLQV
TPQEGDGFEPYTCTVENNKGSDSMVIRLIKVGIPVVKLTVVRRQSDSLFLEWLLLSDVATNSYISHYTLQYHTDHSNGGI
ERTIRISSEKTNYQLHDLQPYTKYTIELFATNKHFSSETSKVEAMTTEAAPSPPRNVKVKIINGTAVNVKWEAPLHPNGP
LLFYTVSYDKKEYIPDGGTKILSVLPNITEVVIGALTPFSNYSIKVKVRNSLTVNESKPVTISTKMAAPSEPLAFEANMT
GAHSATLWWRKPRQLNGKILLFKIRMRWRYKNVKGTYRFITKKIPAKVTPRERRRLRRYMMDYRVLRLEPVREIQLTRIQ
PFAFISVHVSEGTGITENEVFWSPWSNNYTLQTLEGAPSAPRNVELKQNKGASVKVTWLPPEYPNGIIQKYRIIYSNNSI
KNYTAEVTKGLKNTSLFYILSRLHKDSTYQINVQAFTSFPGEVSPTVRRDIKTPRDVLEQNKVDTASLYGGVFAGIIAFV
FVIIIVALVIRNHRKRRDGTDLSGKQYAVANSNDSGIGDKESLDRVPGVKCVQGVRRGSEDVIGPGKFVTIKPIPIQRLP
EYCAINHADRNKGFREEFLSIRVPGSFTWENSQKPENKAKNRFNSIIPYDHTRVTLTELEGTPGSDYINANFIDGYDHPF
KFIATQGPVANTFGDFWRTVWEQGVCVVIMVTNIVEGGRIKCLKYWPSASPEMYGLVLVSPQGEEELADYVVRKFSIQMI
SKSAEHSAREVTQYHFTAWPDQGVPTHATSLLAFLRKVRTSVPEDSGPILIHCSAGVGRTGTYIVLDAMLDQIAAEGVVD
IYGFISHIRQQRSFMVQTEGQYVFVHNALEEYVTCGSTEFPVSDLPERLRILNTVDPDSGDSLVVAEFKNLGLGASDGDS
FIVASRQENKSKNRYAILPFDRTRVTLWPYTGMVGSDYINASFVDSFQQREAFIATQAPLENTVVDFWRMTWEYEAYSIV
MLTTMNELQEGQCAYYLPRREEFIVYGLLMVEVETEDQRNGFCRRRLRVTNTKSGEIRSIYHFHFKEWAERSIPLNGMGL
LDMMKCITRVQQQTGNGPIVIHCSDGSGRTGTFCAINVALERVKLDGTIDIFQTVRRLRTQRPLMVQTEEQYKLCYEITR
LFVESFNDYSDLK

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