Gene
| Gene Model ID | ahya_s0011.g235 |
|---|---|
| Locus | sc0000011 : 4331643 ... 4338182 : - |
| To GenomeBrowser | sc0000011:4331643..4338182 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g235.t1 | 1 | 1 | LRR_9 | 2 | 168 | 0.0 | 272.1 | 0.0 | 0.0 | 271.6 |
| ahya_s0011.g235.t1 | 2 | 1 | LRR_8 | 40 | 75 | 9.8e-07 | 28.3 | 1.7e-06 | 0.0091 | 15.6 |
| ahya_s0011.g235.t1 | 2 | 2 | LRR_8 | 63 | 122 | 9.8e-07 | 28.3 | 2.1e-09 | 1.1e-05 | 24.9 |
| ahya_s0011.g235.t1 | 1 | 1 | LRR_4 | 64 | 109 | 1.6e-06 | 28.2 | 7.0e-06 | 0.038 | 14.3 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g235.t1 | Gene3D | 1 | 175 | IPR032675 | Leucine-rich repeat domain ... | ||
| ahya_s0011.g235.t1 | PANTHER | 1 | 165 | ||||
| ahya_s0011.g235.t1 | PANTHER | 1 | 165 | ||||
| ahya_s0011.g235.t1 | Pfam | 2 | 168 | ||||
| ahya_s0011.g235.t1 | SUPERFAMILY | 7 | 151 | IPR032675 | Leucine-rich repeat domain ... | ||
| ahya_s0011.g235.t1 | SMART | 127 | 145 | IPR003603 | U2A'/phosphoprotein 32 fami... | ||
| ahya_s0011.g235.t1 | MobiDBLite | 158 | 201 | ||||
| ahya_s0011.g235.t1 | PANTHER | 200 | 238 | ||||
| ahya_s0011.g235.t1 | PANTHER | 200 | 238 | ||||
| ahya_s0011.g235.t1 | MobiDBLite | 227 | 251 |
Transcript
| Transcript ID | ahya_s0011.g235.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g235.t1 tagagaaagcaacaagggcttaccgaaagccttcctccaatttttcttggtgtacccggaaagtcgagtaaaatatgaag ttaacagcagatcttattctgcagagcccacagttcacgaatgctttgagagacagggagctcgatcttcgtggctacaa aattcctgttatcgaaaatcttggagcaacattggatcaatttgacaccatagacttgtcagaaaatgatattcggaaac ttgaaggatttccacttctcaggaggctaaagagtttgctcttaaacaacaacagaatatgccgaattgctgaagacctt gagcaaagcctccctcagttagagtccataattatgacttcaaataacatgcaggaattgaaagaattagattcactgaa atcagtccaaactctgagatacctcagcttacttcgaaatcctgttacaaataaacctcactatagattgtatgtcatca ataagattccacagctacgagttcttgactttcagaggataaaacaaagagaaagagaagctgccaaaagaatgtttagt ggcaaaagaggacaagacaatgattcaaaggctaaaaaggcaaaaacttttgttcctggtggtgcccctggtggaagacc cctgccaagtagaccattgcctcctcccacgagggatgttggagcgatcaaggctgccattgcaaatgctcgttccctgg atgaggttaaaaaattagagatgctactaaaaacaggtcatgtccctggaaagaacaagcatgatgcaagtgtagatgaa gaaatggaagacatgtcaaatggatcttaagtgcgctctattgaaaacttggcacagacagaaaggaaattttacatcag cttctctaaaggttacattatttactggcaagaaagaaatgcaagggacaaagcacgattcaacacagcttgttttctac aactttcaataagttcttgtggtcaaccgttcttttttcagaacaaaaggatgttgtaggacgaggttatatgcaacctt tgctctgctggtcccaaaatagaaagtctgattgaatttcttaccaagcctcaccaatggcctctacattaatgcaggtg ttagtataaagtgttgccaaatgtaaggaaaaatgctttttcttttacatgatggctgcctgttaagtcagtgtatttag tagtaattttcatggaagttttcagttcttcacagttcttaatgatttatttttgtcgagaacagatggacaacactctt acttttaaacgaagacgtgaaaacagtaaagtagtctacactatttcaccttttaaaaataaatttatgtaacatttttt ggattaatactgaaccactatgtatttttatttcatcttacctgaggacacaagaaacaacccagaggacattttttcct tttgttcacctttttacaaaataaagtgagaagtcaaggacattgtgcagtttgcacttggtgtgaaaacttcttttaag aaaagtgccagctccatttacaagcatattcaccccttttaccttcaatctacacttttaaatgagcattttctagtaag acctcatctgctgtttgttacattagaaatcaatccaagggaacaactacaactgatctttttgtacattgtacttatca gttttaattcatagtcaagcaagtttcaagttcctaataaactatgatacaatacatctactttcaatcattttaatata aatttacaatgtattatttaactttattttaatttgaaatttcaacccaaatgacactgcagtgttcttaacatcttttc tggtgtaatcaaaaaacattcagcaaatatgaagaatctctttgtataaactaacgtgatagcaaattctttgggtagat gtgccaagatacattgtataattatgtcaatggtagatgagccgtgttctttatgatggagtgatcattaaataaagtca gcaatttaaactgtatatagctacatcactgagtagacagttacaatagataaaactcctacacttaacaataccttgga agatgtgggatacaaaatggcaaataaggaaagtcaaagtcatccacaaccaatctgttttcaacaagtgttgatggaat gactggttctcctaattgatttttatattacctgcatcattatccttatcctccacatggttgctgagtaaccaagattc tccacaagaaaaatgggaaaggtttggcattgagttaaactaaagtggtggatctaaaacacaggttaagccagggcaat aggaagaatgcttcttctgccatggaaataatgagaaatataaattaaataaataatggaggtcctgtcatcacttgatt taccctctgagcacgtggctaaagacctgacctgacctgtgttttagacccttgacaactataatcatgaatgaagagca aggtgtttaggatccagctgtactgttgcaagctttctgggagttgttaaacttgctcctcaagtacatagatgattata aatacccccagtacacatttttatcaagcatctactctatggcaatggcacaaatacatagaaacaaaattcaaactttg aacacaatatgtacatagctgatatttaacactcttgtccatgttttttaaatttccctgtaacattaattcattaaact ttgcacagtata |
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Protein
| Protein ID | ahya_s0011.g235.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g235.t1 MKLTADLILQSPQFTNALRDRELDLRGYKIPVIENLGATLDQFDTIDLSENDIRKLEGFPLLRRLKSLLLNNNRICRIAE DLEQSLPQLESIIMTSNNMQELKELDSLKSVQTLRYLSLLRNPVTNKPHYRLYVINKIPQLRVLDFQRIKQREREAAKRM FSGKRGQDNDSKAKKAKTFVPGGAPGGRPLPSRPLPPPTRDVGAIKAAIANARSLDEVKKLEMLLKTGHVPGKNKHDASV DEEMEDMSNGS |
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