Gene
| Gene Model ID | ahya_s0011.g244 |
|---|---|
| Locus | sc0000011 : 4459477 ... 4473892 : - |
| To GenomeBrowser | sc0000011:4459477..4473892 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g244.t1 | 2 | 1 | CoA_trans | 49 | 271 | 0.0 | 405.1 | 0.0 | 0.0 | 253.7 |
| ahya_s0011.g244.t1 | 2 | 2 | CoA_trans | 305 | 500 | 0.0 | 405.1 | 0.0 | 5.46506e-44 | 150.1 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g244.t1 | PANTHER | 29 | 520 | ||||
| ahya_s0011.g244.t1 | PANTHER | 29 | 520 | IPR004165 | Coenzyme A transferase fami... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | Gene3D | 32 | 297 | ||||
| ahya_s0011.g244.t1 | PIRSF | 42 | 520 | IPR014388 | 3-oxoacid CoA-transferase | GO:0008410|GO:0046952 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | TIGRFAM | 44 | 272 | IPR012792 | 3-oxoacid CoA-transferase, ... | GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | SMART | 45 | 274 | IPR004165 | Coenzyme A transferase fami... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | SUPERFAMILY | 47 | 348 | IPR037171 | NagB/RpiA transferase-like | ||
| ahya_s0011.g244.t1 | Pfam | 49 | 271 | IPR004165 | Coenzyme A transferase fami... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | SUPERFAMILY | 302 | 518 | IPR037171 | NagB/RpiA transferase-like | ||
| ahya_s0011.g244.t1 | Gene3D | 302 | 514 | ||||
| ahya_s0011.g244.t1 | TIGRFAM | 304 | 508 | IPR012791 | 3-oxoacid CoA-transferase, ... | GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | Pfam | 305 | 500 | IPR004165 | Coenzyme A transferase fami... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | SMART | 305 | 502 | IPR004165 | Coenzyme A transferase fami... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
| ahya_s0011.g244.t1 | ProSitePatterns | 343 | 351 | IPR004164 | Coenzyme A transferase acti... | GO:0008152|GO:0008410 | Reactome: R-HSA-77108 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g244.t1 | sp|P55809|SCOT1_HUMAN | Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial | 0.0 |
| ahya_s0011.g244.t1 | sp|Q9D0K2|SCOT1_MOUSE | Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial | 0.0 |
| ahya_s0011.g244.t1 | sp|B2GV06|SCOT1_RAT | Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial | 0.0 |
| ahya_s0011.g244.t1 | sp|Q29551|SCOT1_PIG | Succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial | 0.0 |
| ahya_s0011.g244.t1 | sp|Q54JD9|SCOT_DICDI | Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g244.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g244.t1 tccgctgaccaatgcacatttccttgtaaaacttcccaacacaaattgtacatgcaactggaattcgtctattttacttt caactatggctctaacgaatcgcttttgttcttgtttgaagagaaagagctaccttttaagaaataacattcgcccagtg ttgccagccagcttaacatgtaaattttcaacgagctcatctcgattattgaggctttacaacagtggagatgaggcagt aaaggaaatcccagatgatgcaacactactcataggaggatttggtctctgtggaattcctgagaacctgattgctggac ttctaaaatcaggagtaaaaaatctcacttgtgtcagcaacaatgcaggagttgatgacttcggtctgggattactactt gaaacccaacagattaaacgaatgatttcatcatatgtgggtgaaaatgctgaatttgaacgccagtatctttctgggga actggaagtggagcttaccccacagggtacccttgctgaaaggatcagagcaggaggtgcagggatcccagcatttttta ccccaactggatatggtaccttgatacatcatgggggttcacccattaaatacaacaaagatgggaccatacagatccca agccagccccgagaggcaaggcaatttaatggtcgaaattatatcatggaggaggccataactggagactttgctctaat aaaagccaagaaagctgacaaatttggaaatctcactttcagtaaaacaacaagaaattttaatgcacccatgggaaaag ctgccaagtttacaatagctgaggtagaagaaattgtggaggatggtgaaattccacccgaggatgttcaccttcctggt gtttatgtccaaggattattaaagggttccagctatgaaaaaagaattgagagactaactttaactctggataatgctga gaatggaaaacagaaatctcacgttgctgaaatgagagaaagaattattaaaagagcagctttggagttcagagatggaa tgtatgcaaaccttggtattggcatgcccatgctggctagcaacttcattcctgaaggaatgactgtggttctccaaagt gaaaatggagttcttggaatagggccctttccaaggccaggagaagaagacccagatcttattaatgctggcaaagagac agtaacagttctacctggcagctcctatttttccagtgatgagtcttttgccatgatcagaggaggtcacattgacatca caattcttggagctatgcaggtttctcagtttggagatattgcaaactggatgattccaggtaaaatggtcaaaggaatg ggaggggcaatggatttggtttccagtgggagcaaagtcattgtgaccatggaacatttagcaaagggagataaacacaa gatcttagaaaaatgcacccttcccctaactggcactaattgtgtggacatgattataaccgaaaagtgtgtttttgaag tttgcaaagagaatggccttactcttacagagctgtggccaggggtctctcttcaagacatccagatctccactggatgc acctttcaagtttccccagatttaaaagaaatggagcaggtttcatgagttagaaaaatggagtcttgcatggtactgga cgtagtaaagctttatgccataacaacaagattgacagtgagaagcttagtgatgggcaaaaccaatggctcagctatac tttttgttttagaacatttctggaaatcctcaatcaggcaatgagtcctttgcttgtgaaaggtttgaagagtgaggcta aattccatttccctcaaaaagtaaaatgatgccctcacagatttgaatgatgtggaacaggtgcctcatagtaacaataa tgtgaacatgtgaggggtatggcaatgccagaaaaattaatgttatctgctcatgcagtagagataaaaaaaaaagaaga aa |
|
Protein
| Protein ID | ahya_s0011.g244.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g244.t1 MALTNRFCSCLKRKSYLLRNNIRPVLPASLTCKFSTSSSRLLRLYNSGDEAVKEIPDDATLLIGGFGLCGIPENLIAGLL KSGVKNLTCVSNNAGVDDFGLGLLLETQQIKRMISSYVGENAEFERQYLSGELEVELTPQGTLAERIRAGGAGIPAFFTP TGYGTLIHHGGSPIKYNKDGTIQIPSQPREARQFNGRNYIMEEAITGDFALIKAKKADKFGNLTFSKTTRNFNAPMGKAA KFTIAEVEEIVEDGEIPPEDVHLPGVYVQGLLKGSSYEKRIERLTLTLDNAENGKQKSHVAEMRERIIKRAALEFRDGMY ANLGIGMPMLASNFIPEGMTVVLQSENGVLGIGPFPRPGEEDPDLINAGKETVTVLPGSSYFSSDESFAMIRGGHIDITI LGAMQVSQFGDIANWMIPGKMVKGMGGAMDLVSSGSKVIVTMEHLAKGDKHKILEKCTLPLTGTNCVDMIITEKCVFEVC KENGLTLTELWPGVSLQDIQISTGCTFQVSPDLKEMEQVS |
|