Gene
| Gene Model ID | ahya_s0011.g246 |
|---|---|
| Locus | sc0000011 : 4492272 ... 4502352 : - |
| To GenomeBrowser | sc0000011:4492272..4502352 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g246.t1 | 1 | 1 | COLFI | 78 | 134 | 2.0e-07 | 30.4 | 2.2e-11 | 3.5e-07 | 29.6 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g246.t1 | PANTHER | 59 | 175 | ||||
| ahya_s0011.g246.t1 | PANTHER | 59 | 175 | ||||
| ahya_s0011.g246.t1 | Pfam | 78 | 134 | IPR000885 | Fibrillar collagen, C-terminal | GO:0005201 | Reactome: R-HSA-1442490|Reactome: R-HSA-1650814|Reactome: R-HSA-2022090|Reactome: R-HSA-3000171|Reactome: R-HSA-8874081|Reactome: R-HSA-8948216 |
| ahya_s0011.g246.t1 | Gene3D | 79 | 243 | IPR014716 | Fibrinogen, alpha/beta/gamm... | ||
| ahya_s0011.g246.t1 | SUPERFAMILY | 82 | 134 | IPR036056 | Fibrinogen-like, C-terminal |
Transcript
| Transcript ID | ahya_s0011.g246.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g246.t1 ttctgatataaagtagttattgttgatgtgcccgtccagtttgtttcttttccaggataaggagagactttgagctaaga gcaaggttggatatttgtcgacactcagcatggctcgtttgacagttttggcgctcgtgtgcttcagcatcttgtgtctt tcaagcgctggtggaaagaaaggatgcaaaaagccaaagaggatacgccctgtattcttaaaagagagcaactgtgaatg tgtttctgaaattaccggcaggatgaagcagcaagatggagaaatatttttctgcgatggaagtgaatggaaggctttgg cttttgagaaagtgaagcttcttggttcaaaagagaacccaggttcttcatgtggagaaatcaaatcaaaagaaccaaaa cagaacactaatggcgtatactggatcaattcaacaaaaggagaaacagttccagtgtactgtgacatggaggcaggagg atggaccatggtttttaaaatcctgaatgacgcagacgatgatgcttataccgtgtacaattccagcgacacttacgctg agactgaaatcagcgccctcgacgtaaacaactcgtactcaggtgtttacaagaatgagattgttatcaattggagtgat ttcggccccactaaggccagggtagctctgttcaaagcaggatcagttgtcaaggaaatgatgttcgacgccacgggatc tgacaagttctcatggttttcacgagacaaactgacgggtaccttaccctggaccgatatcaaacaagtatcgtccaatc acttctctatcgaaggagatactacatttagtcgccgattcttcattaacaaagcttatggtcattgcactggagacgaa ggctggatggcgattggcggaccttactgcgactgggaaaagaacttcggagataacgcgatactctacagtaaactgag taccgccacaaagtggcagacgcccccagcttacgccaacattggagaggcagatgttttggcggtgtttgtgcgctaaa gcgacgatacacttctctcagagatgtgccgatgaatggccgggatcgataaaaagttgaaacaagatttcttgggctat agatttagtgtaataatttaaacagcaacggtggattttactataagtttagatacagagaaataaagagcttcacaaaa c |
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Protein
| Protein ID | ahya_s0011.g246.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g246.t1 MARLTVLALVCFSILCLSSAGGKKGCKKPKRIRPVFLKESNCECVSEITGRMKQQDGEIFFCDGSEWKALAFEKVKLLGS KENPGSSCGEIKSKEPKQNTNGVYWINSTKGETVPVYCDMEAGGWTMVFKILNDADDDAYTVYNSSDTYAETEISALDVN NSYSGVYKNEIVINWSDFGPTKARVALFKAGSVVKEMMFDATGSDKFSWFSRDKLTGTLPWTDIKQVSSNHFSIEGDTTF SRRFFINKAYGHCTGDEGWMAIGGPYCDWEKNFGDNAILYSKLSTATKWQTPPAYANIGEADVLAVFVR |
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