Gene
| Gene Model ID | ahya_s0011.g250 |
|---|---|
| Locus | sc0000011 : 4662284 ... 4674912 : - |
| To GenomeBrowser | sc0000011:4662284..4674912 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g250.t1 | 2 | 1 | F5_F8_type_C | 43 | 169 | 3.3e-27 | 95.0 | 1.2e-23 | 2.0e-19 | 69.8 |
| ahya_s0011.g250.t1 | 2 | 2 | F5_F8_type_C | 200 | 314 | 3.3e-27 | 95.0 | 4.3e-09 | 7.0e-05 | 22.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g250.t1 | Gene3D | 20 | 175 | IPR008979 | Galactose-binding-like doma... | ||
| ahya_s0011.g250.t1 | PANTHER | 23 | 173 | ||||
| ahya_s0011.g250.t1 | PANTHER | 23 | 173 | ||||
| ahya_s0011.g250.t1 | SMART | 23 | 174 | IPR000421 | Coagulation factor 5/8 C-te... | ||
| ahya_s0011.g250.t1 | ProSiteProfiles | 24 | 174 | IPR000421 | Coagulation factor 5/8 C-te... | ||
| ahya_s0011.g250.t1 | SUPERFAMILY | 28 | 173 | IPR008979 | Galactose-binding-like doma... | ||
| ahya_s0011.g250.t1 | CDD | 29 | 173 | ||||
| ahya_s0011.g250.t1 | Pfam | 43 | 169 | IPR000421 | Coagulation factor 5/8 C-te... | ||
| ahya_s0011.g250.t1 | ProSitePatterns | 66 | 95 | IPR000421 | Coagulation factor 5/8 C-te... | ||
| ahya_s0011.g250.t1 | Gene3D | 176 | 324 | IPR008979 | Galactose-binding-like doma... | ||
| ahya_s0011.g250.t1 | SMART | 180 | 329 | IPR006585 | Fucolectin tachylectin-4 pe... | ||
| ahya_s0011.g250.t1 | SUPERFAMILY | 181 | 319 | IPR008979 | Galactose-binding-like doma... | ||
| ahya_s0011.g250.t1 | PANTHER | 216 | 247 | ||||
| ahya_s0011.g250.t1 | PANTHER | 216 | 247 | ||||
| ahya_s0011.g250.t1 | MobiDBLite | 345 | 365 |
Transcript
| Transcript ID | ahya_s0011.g250.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g250.t1 gtcacatggaagggtttgattacagccacttttaatttcacgacaaaagcttaatttagtcttgcatcgtgagcatttct catatctgttgtactgagtcacattatctcgcattcctgtcttctcttcagtgtttccttcgtcgacggctttccaaagc ctaaccggaagtcattcgatatttcttataggaaatgaagtattttaaacaaatagaaaagggtcattaccacaaagaca atattacgaagctgaaattttttaatgttagcccttcatttggacttttatgttcagaatgtcctggtatcacaaatggg aaaatttaatggaatggtttaccattaatgtggtgaataatgcatcatgtgagcaggattccctcggtttagagaacaat gtgttgattcctgacagctggttgacatcttcatcaaaacttgacgccaacactcctgccaagaatggaagattgaactt cacagggggggaatcatggtgtgcatcatcaagtgataattatccatatctagagattgatctccagatacttcatatta tatgtgcaatctccactcagggaaatcaccaagcagatcagtgggtgaagacattcggtctgcaatcatccacagatgga aaaacttggacaaattacacacaagatgaccaagttagcataaagatcttcagtggaaactatgacaagaacacgattgt aaaacatattttgtacgttggaattgtggctagacatctgcgttttgttgctggagttaaacatggtgaagcatgcatgc gagcagcaatatttggatcaccaaggcatgatattaaaggaaatattgcacttaataagcccactgaccaaatatcagtg tataagacctcatattcaagcaatgctgtggatggtggtacaaaaactaactatcaggtgtgtgcacactgtgtgtatgt agcaaacccatggtggagagttgatctgggacgagtagaagatgtggctgaagtgcatatacttggcagggattcctatg aaagtgacatggatggtgctgagataagagttggggatttaactgctaatgggggagcaaacaatcatctttgtgccaat aacatccgtcttggaccaagccaagaaaagacttttttctgcaagcctacagcatctggcagatacgtttacatcagaaa tgcaatgggtctcagcggtggaattgttctagtgtgtgaggttgaagtttattcctcttacatatctagtaagttttcct taagtgactatgataatagcattatagaattggctgcgaccaaggccacaaaatctcccgggaccggtaagcagtcgaga tatccttcctggtcttcatcacttacaatctcaggttcatcttcgtctagacttcgactagccacagaggttaacaaatc gagcgctctctcttttttttgggttaacggccgttcatcgtaatatttttgttgggctctgatagaatgtttcatgagag tcgcaaacgattcccttaaggaataatcgccactttctggaagcgacaaaaagtaatcaacaacaatttttcgaaggtca accgttgtcaatctccgagataagtacttttcgaatagtccggatatataattgcggtaagaggcatgcgagaaacgatt tcccctcggagcaacgaacaaaaagtcgtggtcattgccgtgtagcaaaagtgatctcatcttagacttgtatagtcgca gatagtaattcaagtatgtgactgagctcacgtcagtggtgtttaggccgtaagtatttctggtcttgtaattattttcc aacaatactatgccaccgtcctccttgaaccagataaaattttgatcttttaattggtcgccgctttgatctttataaat tctcagtgagatgtattctttgactcggcccgggttaaccgcacagtacatgagaagcaagcacaaattcatacaacttc gtgcacgatcagcacctgt |
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Protein
| Protein ID | ahya_s0011.g250.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g250.t1 MSWYHKWENLMEWFTINVVNNASCEQDSLGLENNVLIPDSWLTSSSKLDANTPAKNGRLNFTGGESWCASSSDNYPYLEI DLQILHIICAISTQGNHQADQWVKTFGLQSSTDGKTWTNYTQDDQVSIKIFSGNYDKNTIVKHILYVGIVARHLRFVAGV KHGEACMRAAIFGSPRHDIKGNIALNKPTDQISVYKTSYSSNAVDGGTKTNYQVCAHCVYVANPWWRVDLGRVEDVAEVH ILGRDSYESDMDGAEIRVGDLTANGGANNHLCANNIRLGPSQEKTFFCKPTASGRYVYIRNAMGLSGGIVLVCEVEVYSS YISSKFSLSDYDNSIIELAATKATKSPGTGKQSRYPSWSSSLTISGSSSSRLRLATEVNKSSALSFFWVNGRSS |
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