Gene
| Gene Model ID | ahya_s0011.g30 |
|---|---|
| Locus | sc0000011 : 546821 ... 559940 : - |
| To GenomeBrowser | sc0000011:546821..559940 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g30.t1 | 1 | 1 | GTP_EFTU | 157 | 378 | 9.8e-23 | 80.6 | 7.1e-26 | 1.7e-22 | 79.8 |
| ahya_s0011.g30.t1 | 1 | 1 | GTP_EFTU_D2 | 404 | 474 | 9.9e-09 | 35.4 | 1.0e-11 | 2.4e-08 | 34.1 |
| ahya_s0011.g30.t1 | 1 | 1 | GTP_EFTU_D3 | 483 | 554 | 6.5e-06 | 26.3 | 7.7e-09 | 1.8e-05 | 24.9 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g30.t1 | PANTHER | 41 | 569 | ||||
| ahya_s0011.g30.t1 | PANTHER | 41 | 569 | ||||
| ahya_s0011.g30.t1 | Gene3D | 152 | 388 | ||||
| ahya_s0011.g30.t1 | ProSiteProfiles | 153 | 383 | IPR000795 | Transcription factor, GTP-b... | GO:0003924|GO:0005525 | |
| ahya_s0011.g30.t1 | SUPERFAMILY | 156 | 405 | IPR027417 | P-loop containing nucleosid... | ||
| ahya_s0011.g30.t1 | CDD | 157 | 381 | IPR035531 | GTP binding protein 1-like,... | ||
| ahya_s0011.g30.t1 | Pfam | 157 | 378 | IPR000795 | Transcription factor, GTP-b... | GO:0003924|GO:0005525 | |
| ahya_s0011.g30.t1 | SUPERFAMILY | 387 | 476 | IPR009000 | Translation protein, beta-b... | ||
| ahya_s0011.g30.t1 | Gene3D | 389 | 476 | ||||
| ahya_s0011.g30.t1 | CDD | 390 | 476 | ||||
| ahya_s0011.g30.t1 | Pfam | 404 | 474 | IPR004161 | Translation elongation fact... | GO:0005525 | |
| ahya_s0011.g30.t1 | CDD | 482 | 568 | ||||
| ahya_s0011.g30.t1 | SUPERFAMILY | 482 | 568 | IPR009001 | Translation elongation fact... | ||
| ahya_s0011.g30.t1 | Gene3D | 482 | 568 | ||||
| ahya_s0011.g30.t1 | Pfam | 483 | 554 | IPR004160 | Translation elongation fact... | ||
| ahya_s0011.g30.t1 | MobiDBLite | 567 | 616 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g30.t1 | sp|O00178|GTPB1_HUMAN | GTP-binding protein 1 | 0.0 |
| ahya_s0011.g30.t1 | sp|Q5R8Q7|GTPB1_PONAB | GTP-binding protein 1 (Fragment) | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g30.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g30.t1 gggacaaaaacatcctcacgcaagcgcaaaggctgatgaaattgccttgaattgaacgaaatttgctcttttgcaaggca aagtcgttgattataaccggcattgcaccacatctcaacttatttattgtatgatctagtgagatttttacagaaacatc tgagggactcaagttgtggggagacggggaagaggttgacacaggactatcatcttgtgtcgatattattgcagctggtc tgaccctcttgttctataaatgaaactttcatcaggcaagttacaaaagaagaggcgagtgttatttatagcaaggtgtg gttgacttgttctgaactttagagatctcagcttaataaaagcaatgagcgcattagcagagagcataaatattgaagag agattatctgcactctcactgaatggcaaacaagctggaccatcagtctgtgaggacaacttgtttgctccagatagtga gggtgaactgttccttgatgaaaatggcatatgtaatgatgcagatcaagctttggaccaaaggatggccttgatcagtc caactgatgaacagtttgatattttacttcataaactaaaggaaaggttagatgaaggccacggagagaccatttatgaa gttggggttggagatggtaccgctagtggtctcaatgctgatgatctcaaagcctctgtggattctttaaagctgttgtg tgaagcttgtgatgctgacattgtgttgctgagagagaaaccagctgaggaaggaaatattgccgagtatcttgtgcgaa accgtgctgatgaaaacgatttcatggaagtgagagtggcagtagttggtaatgtggatgctggtaaaagcaccttactt ggtgttctcactcatggagaactggacaatggaagaggaatggccaggcaaagactatttaggcacaaacatgaaatgga atctggaagaaccagcagtgtgggaaatgatattcttggatttgacagtaggggagatgttgtcaataaacctgatgctc atggtggaggcctggattggtcaaagatatgccaaatgtcatcaaaggttataacatttattgaccttgctggtcatgag cgatatctaaaaactaccatttttgggatgacaggccatgttccagactttgccatgctgatgattgggtcaaatgctgg aataataggcatgacaaaagagcaccttggcctggctcttgccctgaatgttccagtctttgtggttgttactaagattg atatgtgtccaccaaatgtcttacaagataccatgaaactgttaaccaagattctgaaatcgcctggctgccgaaaaatc cctgtcattgttcaaaattccgatgatgtggtcgtatcagcaacaaattttatctctgaaagggtttgtccaatcttcca aatctccaacgtcacaggtgaaaacctggacttgttaaagatgtttcttaacttgctgtcaattcgcgctcatttcaaga aggaagatccagctgaattccagattgatgatacttattctgtgccgggggtgggcacagtcgtgtctggcacctgtctc cgagggactattcgactcaatgacgttctattactcggccccgaccctctcggacagtttcaacaaatcgttgtcaagac aatccaccggaaaagaatgccagtgaaagagctacgggcggggcagactgcgtcatttgctttgaaaaagataaagcgat cgcagatccgaaaaggaatggtgatggttgacaggcgagttaaacctgaggcctgctgggaatttgaggcagaagtgctc gtattgcatcacccaacaacaattagccccaagtaccaagctatggttcattgtggaagtatgagacaaacagctacaat aattcacatggataaagaccatttaagaactggagataaagcaatggttcgcttccgtttcataaaacaaccggaatttg taaaaccagacacgcgcatgatcttcagagagggaaggacaaaagctgtaggaacaatacaccgagttgatccgactgcg catcctccgcctcttgttggcgggaaagtcaagcatcgcgggcccggccgaggagcaccgttatcacgtgacaaggccaa ggaagcaactaatgcgcaagcgtcaaacagtacagaaagaacatcaaaaagataaattggaagtgttgtcgtatatttat atcagtagttttacgtttaattaggtgtgcccattttaattcttaaagatgtccttataaaaacattctcgtaatcttct ggaatatttgatcttatcttgacattttttaacatattctttttattactttttcttgtgccctgcgaaagattcgtcgt aggaattaagttaattccagtcaaaattttaataatataattgcggatttaaaaagcttttaagttgggttaacatttgg ttttaaacaaaacaatttcatcagcagggatctttgtgtgtcaaagtgacttctttgggaacttggctcgatcatccgac tccgaaccaccctcctccaaccctcctccaacgtaccggagccgctgaccatgttttcgagtctaagtatagtttctgtc ttgatctctgttaaggcgcagcaaacctgccatttttcatccaccagtgtcttattttattgagctgatgaagtcaattt gtgttcgaaagtatgtattttcacaagtagtacttcaagtgacttccagtgggcgacaaattttagcgagttctttcctt atttctatgaagaaaagcaggaaagtccgaataaaagaacagttcattc |
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Protein
| Protein ID | ahya_s0011.g30.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g30.t1 MSALAESINIEERLSALSLNGKQAGPSVCEDNLFAPDSEGELFLDENGICNDADQALDQRMALISPTDEQFDILLHKLKE RLDEGHGETIYEVGVGDGTASGLNADDLKASVDSLKLLCEACDADIVLLREKPAEEGNIAEYLVRNRADENDFMEVRVAV VGNVDAGKSTLLGVLTHGELDNGRGMARQRLFRHKHEMESGRTSSVGNDILGFDSRGDVVNKPDAHGGGLDWSKICQMSS KVITFIDLAGHERYLKTTIFGMTGHVPDFAMLMIGSNAGIIGMTKEHLGLALALNVPVFVVVTKIDMCPPNVLQDTMKLL TKILKSPGCRKIPVIVQNSDDVVVSATNFISERVCPIFQISNVTGENLDLLKMFLNLLSIRAHFKKEDPAEFQIDDTYSV PGVGTVVSGTCLRGTIRLNDVLLLGPDPLGQFQQIVVKTIHRKRMPVKELRAGQTASFALKKIKRSQIRKGMVMVDRRVK PEACWEFEAEVLVLHHPTTISPKYQAMVHCGSMRQTATIIHMDKDHLRTGDKAMVRFRFIKQPEFVKPDTRMIFREGRTK AVGTIHRVDPTAHPPPLVGGKVKHRGPGRGAPLSRDKAKEATNAQASNSTERTSKR |
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