Gene
| Gene Model ID | ahya_s0011.g34 |
|---|---|
| Locus | sc0000011 : 608696 ... 616090 : - |
| To GenomeBrowser | sc0000011:608696..616090 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g34.t1 | 1 | 1 | Arf | 105 | 242 | 2.7e-06 | 26.8 | 1.0e-09 | 4.1e-06 | 26.2 |
| ahya_s0011.g34.t1 | 1 | 1 | Ras | 111 | 267 | 8.3e-39 | 132.7 | 2.7003e-42 | 1.1e-38 | 132.2 |
| ahya_s0011.g34.t1 | 1 | 1 | Roc | 111 | 224 | 1.1e-11 | 44.8 | 4.9e-15 | 2.0e-11 | 44.0 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g34.t1 | MobiDBLite | 1 | 42 | ||||
| ahya_s0011.g34.t1 | MobiDBLite | 55 | 85 | ||||
| ahya_s0011.g34.t1 | ProSiteProfiles | 101 | 304 | IPR020849 | Small GTPase superfamily, R... | GO:0005525|GO:0007165|GO:00... | |
| ahya_s0011.g34.t1 | SMART | 106 | 272 | ||||
| ahya_s0011.g34.t1 | Gene3D | 107 | 185 | ||||
| ahya_s0011.g34.t1 | TIGRFAM | 109 | 262 | IPR005225 | Small GTP-binding protein d... | GO:0005525 | |
| ahya_s0011.g34.t1 | PRINTS | 109 | 130 | ||||
| ahya_s0011.g34.t1 | PANTHER | 109 | 280 | IPR020849 | Small GTPase superfamily, R... | GO:0005525|GO:0007165|GO:00... | |
| ahya_s0011.g34.t1 | PANTHER | 109 | 280 | ||||
| ahya_s0011.g34.t1 | SUPERFAMILY | 110 | 265 | IPR027417 | P-loop containing nucleosid... | ||
| ahya_s0011.g34.t1 | Pfam | 111 | 267 | IPR001806 | Small GTPase superfamily | GO:0003924|GO:0005525 | |
| ahya_s0011.g34.t1 | SMART | 111 | 272 | ||||
| ahya_s0011.g34.t1 | SMART | 111 | 273 | ||||
| ahya_s0011.g34.t1 | CDD | 111 | 262 | ||||
| ahya_s0011.g34.t1 | PRINTS | 132 | 148 | ||||
| ahya_s0011.g34.t1 | PRINTS | 149 | 171 | ||||
| ahya_s0011.g34.t1 | Gene3D | 186 | 273 | ||||
| ahya_s0011.g34.t1 | PRINTS | 212 | 225 | ||||
| ahya_s0011.g34.t1 | PRINTS | 247 | 269 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g34.t1 | sp|P70426|RIT1_MOUSE | GTP-binding protein Rit1 | 2.0e-39 |
| ahya_s0011.g34.t1 | sp|Q92963|RIT1_HUMAN | GTP-binding protein Rit1 | 7.0e-39 |
| ahya_s0011.g34.t1 | sp|Q96A58|RERG_HUMAN | Ras-related and estrogen-regulated growth inhibitor | 1.0e-35 |
| ahya_s0011.g34.t1 | sp|Q8R367|RERG_MOUSE | Ras-related and estrogen-regulated growth inhibitor | 2.0e-35 |
| ahya_s0011.g34.t1 | sp|Q0VCJ7|RERG_BOVIN | Ras-related and estrogen-regulated growth inhibitor | 4.0e-35 |
Transcript
| Transcript ID | ahya_s0011.g34.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g34.t1 ataagcatttgatgctgtggaatttgttcaaggatcgcaatctgacgaaaggcaaaagagcacatcgtcaaagaatcctg caaacagcacatttaaggctcatctaaacttgtgcggaaacaacacgcggtgatgtgggggatatgaggaaggattcaaa tctctttatgtcactgagaaggaaaagcattccggagtcagggatcttcacaacttcgacgatgcgccatcctctaacgt ttaccccaccacggcagagaaagcagtcattttcaggccgagccagtgcggccggtgtgatttcctattcggctgacagg aaattgctacctagcaggcggagaagcaatagcttgggcggcaaagatcacgacctcagcccatcaaaactggattccca accatttaagaaacgaccgagtcttctgggaagcaagcttaaattaggtagtaaagaggcggatcatgcggtgtccaata gaaccgaaaaacattctattgtgatgcttggagctggaggtgttggaaaaaccgcgctagttgttcgatttgtcactggc cgattcctgaacgagtacgaccctacactagaaatggtttacgaaaaggacatcaccgttgcagaaagtacagtttcact tgacattttagacacagccactaacaccgaagcgacttacattaggactggtgagagctttatagtggtatactcgataa cggatcattacagttttgaagtggcgagacagatggtgaagctaatcagagaagtgcgaaagcagagccaggaggagggg tgtcaggtcccagtgatactgattgggaacaaaagagatttacggcgagggagacaagttagcaaagaagaggcaagaga aacagcggaagaattctcctgttcgcattatgaaacttcagctctgacaaacaaaaatgtccaaattgttttccttaaca tggtcttccacgtcaggattaataaacaggcacggcaaaaggcccagggatcatccggtaacaatgggtttttcaactcg gtacgccagctgttgcacagacgaagcagtttaccgagctagaaagaggaacctcatattttgcgcctaaaacgtggtct ttataaagtcccataaaagacaaacgttcacggtggaaaattaaagtttttaacgaggtaactaatctaactttgttcaa gtcatgcggtatggaaaaaatagtttgcaataaatagaaaaccaaaaagctctttcacgttaaaaacgcgtaactgaaag gaggtgaggtttttatcactcgcagtgatcaccgttgtttataaataaacagaggtcccaacttgggccaatgttcgtta acagtttttggctctcagcttttcttagaaaactgatttagtttgaatgcattgtctccaccgaccatcatcagcttttc atactctgacactttaacgacggagtttaaacaaggacgacaccaattgctcagacaacgccacaaatcaatgatgtgat ttgtggaatgaggaaaaaatcatcgtgctgccatgtggcacgcactttagtcaatttctcaaccgcgctgtgcaaaacca gcacaagcactaacaaactactatgcgagttgtaggtcagggtcagaaattcgcacaacaatactgataaagttaaaaca taaatgcgacaactacgaactacattgtggatcaaggtaaacaagtattgaatttcctgttaggctcacaattctacctc gggtcaaatggcaaaaacgaacgagagaggaaaactggaattggttacggtacacctggaagagcattgcaacttgacga tgcactccgaaatttcagcctcgacggagatcactttcggtccatacaggaacctttgctctggagagttaagttgaccc ctagacactttgtgtgacagctagagtccgttcttcagctaccgacccaccagttctgtttggagtttggagttatgtag tcattctttttccttcatttatgtagcactaaaggtccgatgagcaagtgtgtatcataagttttttaattcagtgacat gcgtttccgtcgccgtcttaacaccgagcgccacagcatttttcaggtccatgacgtttgttgcaattgagtggtcgaca cctttaagctaggaatagtcttcactggaactgctcctgagaagttatgtgctgtaaatatttaagttctcaagacgcgg ttcctcatttttaaattgttatcgctgaaataaaagaaaaaaagaatt |
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Protein
| Protein ID | ahya_s0011.g34.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g34.t1 MSLRRKSIPESGIFTTSTMRHPLTFTPPRQRKQSFSGRASAAGVISYSADRKLLPSRRRSNSLGGKDHDLSPSKLDSQPF KKRPSLLGSKLKLGSKEADHAVSNRTEKHSIVMLGAGGVGKTALVVRFVTGRFLNEYDPTLEMVYEKDITVAESTVSLDI LDTATNTEATYIRTGESFIVVYSITDHYSFEVARQMVKLIREVRKQSQEEGCQVPVILIGNKRDLRRGRQVSKEEARETA EEFSCSHYETSALTNKNVQIVFLNMVFHVRINKQARQKAQGSSGNNGFFNSVRQLLHRRSSLPS |
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