Gene
| Gene Model ID | ahya_s0011.g67 |
|---|---|
| Locus | sc0000011 : 1272145 ... 1275059 : - |
| To GenomeBrowser | sc0000011:1272145..1275059 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g67.t1 | 1 | 1 | RVT_1 | 556 | 711 | 1.0e-26 | 93.7 | 4.6e-30 | 1.9e-26 | 92.8 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g67.t1 | PANTHER | 65 | 889 | ||||
| ahya_s0011.g67.t1 | PANTHER | 65 | 889 | ||||
| ahya_s0011.g67.t1 | Coils | 95 | 122 | ||||
| ahya_s0011.g67.t1 | Gene3D | 128 | 175 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| ahya_s0011.g67.t1 | SUPERFAMILY | 135 | 174 | IPR036875 | Zinc finger, CCHC-type supe... | GO:0003676|GO:0008270 | |
| ahya_s0011.g67.t1 | SMART | 137 | 153 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| ahya_s0011.g67.t1 | SMART | 156 | 172 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| ahya_s0011.g67.t1 | ProSiteProfiles | 157 | 172 | IPR001878 | Zinc finger, CCHC-type | GO:0003676|GO:0008270 | |
| ahya_s0011.g67.t1 | MobiDBLite | 171 | 209 | ||||
| ahya_s0011.g67.t1 | Gene3D | 222 | 321 | IPR021109 | Aspartic peptidase domain s... | ||
| ahya_s0011.g67.t1 | SUPERFAMILY | 479 | 889 | ||||
| ahya_s0011.g67.t1 | Gene3D | 503 | 635 | ||||
| ahya_s0011.g67.t1 | ProSiteProfiles | 535 | 713 | IPR000477 | Reverse transcriptase domain | ||
| ahya_s0011.g67.t1 | CDD | 538 | 713 | ||||
| ahya_s0011.g67.t1 | Pfam | 556 | 711 | IPR000477 | Reverse transcriptase domain | ||
| ahya_s0011.g67.t1 | Gene3D | 636 | 717 | ||||
| ahya_s0011.g67.t1 | Gene3D | 718 | 845 | ||||
| ahya_s0011.g67.t1 | CDD | 807 | 894 |
Transcript
| Transcript ID | ahya_s0011.g67.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g67.t1 ctatcagaggacgctcgagatgaagttacgaagcttccatttccgtcggggcatgaacattagcaactttgtaactgatt taagaaacattattcacgaattatacaacatcaaagacgagaaagcagtcgacttaattgccataagccatgtcacgaca tcactagatgaagagttaagagagcctatacgtattttacagttatcgggaacagctactttggagggcatcctagaact cattcaaagcaaacagacacagcattctttcagtcctgaaattccggtggcatctagcaccaacgtcgattcaaacaatc gtttggataggttagaaaagttagtcgagggattaactgataccgtacaaaaattaactactagcagtaatgcagcattc gcacagccaatgagtagcacagcgaacatttgtgatcactgtggaaaatccggtcacaacaggcaatcatgcttcaaact taaaacatgcttgaaatgtggcttgagaggtcatattgcaaagttttgtcgcaaccaaaatggcccacgagcgccacaat cacaacagttcccatcgtcaggaagaggtcgcccttcaccctggttccaagcgaattctagtgctggcgaaaccgcaaat agcatgatcagtaatcctaaagatgctgtaaatttggacccagcgccaagaattttattagacatcacagtttgtgacac acccctcaaattcctttatgacccaggatcgcagtatactatgatcccatcctcaatctaccataacatgcaacacaaac cacctctcgcgccagtaaataaggtgggaatcggcatttctgggacacattttcagtttgatggtgcagcgcatatgaac cttaaattcaaacgacctgatgacacgtcatatatactcgagtatgagccagttctagtaagcccacacatcacaacatg catatttggtattcactctgagttaagatttcaatctgctgcgcgagatcatggcgaaaaatgcattacgttcgtcccta ctgatggccaaatggtacaaatgccatacttgaaagagaagtctgatggtcgcagcgcttttattcaagtatcaaaggcc accattgttccaaacaatgaactttgctgggtatccggcaagatcaaaggcatcaatatcaaggagaataattcagctac gccattcttatttgagggagagccagagcttgaacttggtttcacagatcttaaattagatttgcaagaaaagaatgtaa aagttccagtttttaatgactcgggagcggacgtgaccttacgcaagggcgtccaactgggtaccttgacagaactgcac agtgaacaggcagtggtttcaaatgttttagataatgtgttgtgcgacgccatggagtctattgacactaacttgcatcc caaggttaaagaattgattgacaattatcagtctaaattaaacgatatcccagaatcacagcccgcaaacgtaccgattg aacatagcatcgaattatctgatgtcactcctgtgtacgagccacctcgaagaattgcttacagtcaaagagaaccaatt tcaaaggcaatagatgaattacaagcgaaagattttgttgagccttctcgttcaaagtacggctcgccggttgtaccagt cgttaaacgcaatggagaaattcgcctttgttgtgactacaggaagttgaatgccaaaacaattgccagacaatttccgt tgccgcgtgttgatgaacttatcgacaatatgagaaattcgtcgatttattcagtcctcgatttaaagagtggatatttc caaatttcattgaaagaggaagatcgtgagaaaactgcttttgttctaccgtggggaaaatatcaatggaagcacatgcc tcaaggtttactaggtgccccatttacctttgctgagaacatttcacatattttcagtgacatgacgtcgtttgtgtctg cttactttgacgacatcgctatctttagcgctactgaagaggaacattacatgcatgttcagaaagtccttaatcgactc gttgagtgtaatctacgcattaatttgagcaagtgtcaatggtttcaaccagaagttgaatttttgggccatcttatcac taaagatggaatcaagccaattcgaagaaagataaaggatattgtcagctttgaccaaccacagtctgtggacgaactca gacgatttctcggactagctggttactatcgtaaatttgtcccaaacttcgcatctacagcgtcacctttatatcagctc ttaaagaagaatcgcacatttgtgtggactagggaatgtgatttagcctttctagctattaagcaagtgctgcaaagtga cactctgctgaaatttccggatttggagaacccgttcatattacaaaccgacgccagtggttctgcgattgggtttgttc tgggacaagaggaagatggaatcatcaaaccaatcaaatttgggggtagagcgttaactaactctgagcttaattattca gttacggataaagaactcttgagtatctattatgcttacaaacaaactgaagtctacataatgggacatgattgtgttgt ttacacggatcacaagcctcttgttcatctcaaatcatttcgtgatcttgtgaataagcgaagataagatatgttgttgg caaagataatgttgtcgctgattatctaagccggaacataaaaaatgagcttccctggagtgtgatttcctgtaacacaa tcgaactttctcaacagttgtacacaaacagtgaatttattgcttttcaacgccaagacagtgagttatcacaaatattc aattttttggaaaagaatgaagaagatcgtgatcg |
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Protein
| Protein ID | ahya_s0011.g67.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g67.t1 MKLRSFHFRRGMNISNFVTDLRNIIHELYNIKDEKAVDLIAISHVTTSLDEELREPIRILQLSGTATLEGILELIQSKQT QHSFSPEIPVASSTNVDSNNRLDRLEKLVEGLTDTVQKLTTSSNAAFAQPMSSTANICDHCGKSGHNRQSCFKLKTCLKC GLRGHIAKFCRNQNGPRAPQSQQFPSSGRGRPSPWFQANSSAGETANSMISNPKDAVNLDPAPRILLDITVCDTPLKFLY DPGSQYTMIPSSIYHNMQHKPPLAPVNKVGIGISGTHFQFDGAAHMNLKFKRPDDTSYILEYEPVLVSPHITTCIFGIHS ELRFQSAARDHGEKCITFVPTDGQMVQMPYLKEKSDGRSAFIQVSKATIVPNNELCWVSGKIKGINIKENNSATPFLFEG EPELELGFTDLKLDLQEKNVKVPVFNDSGADVTLRKGVQLGTLTELHSEQAVVSNVLDNVLCDAMESIDTNLHPKVKELI DNYQSKLNDIPESQPANVPIEHSIELSDVTPVYEPPRRIAYSQREPISKAIDELQAKDFVEPSRSKYGSPVVPVVKRNGE IRLCCDYRKLNAKTIARQFPLPRVDELIDNMRNSSIYSVLDLKSGYFQISLKEEDREKTAFVLPWGKYQWKHMPQGLLGA PFTFAENISHIFSDMTSFVSAYFDDIAIFSATEEEHYMHVQKVLNRLVECNLRINLSKCQWFQPEVEFLGHLITKDGIKP IRRKIKDIVSFDQPQSVDELRRFLGLAGYYRKFVPNFASTASPLYQLLKKNRTFVWTRECDLAFLAIKQVLQSDTLLKFP DLENPFILQTDASGSAIGFVLGQEEDGIIKPIKFGGRALTNSELNYSVTDKELLSIYYAYKQTEVYIMGHDCVVYTDHKP LVHLKSFRDLVNKRR |
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