Gene
| Gene Model ID | ahya_s0011.g73 |
|---|---|
| Locus | sc0000011 : 1672609 ... 1681750 : - |
| To GenomeBrowser | sc0000011:1672609..1681750 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g73.t1 | 2 | 1 | Collagen | 148 | 200 | 3.0e-15 | 55.6 | 6.1e-12 | 1.1e-08 | 34.5 |
| ahya_s0011.g73.t1 | 2 | 2 | Collagen | 161 | 216 | 3.0e-15 | 55.6 | 2.6e-12 | 4.6e-09 | 35.8 |
| ahya_s0011.g73.t1 | 3 | 1 | Ig_3 | 221 | 292 | 2.5e-40 | 136.8 | 1.2e-17 | 2.2e-14 | 53.7 |
| ahya_s0011.g73.t1 | 3 | 1 | I-set | 221 | 305 | 2.8e-35 | 120.1 | 4.6e-19 | 8.4e-16 | 57.7 |
| ahya_s0011.g73.t1 | 2 | 1 | Ig_2 | 224 | 302 | 4.1e-20 | 71.7 | 1.2e-10 | 2.1e-07 | 31.0 |
| ahya_s0011.g73.t1 | 3 | 1 | ig | 230 | 299 | 6.4e-23 | 80.6 | 3.7e-10 | 6.7e-07 | 29.3 |
| ahya_s0011.g73.t1 | 3 | 2 | Ig_3 | 308 | 381 | 2.5e-40 | 136.8 | 1.7e-14 | 3.0e-11 | 43.6 |
| ahya_s0011.g73.t1 | 3 | 2 | I-set | 311 | 394 | 2.8e-35 | 120.1 | 1.4e-12 | 2.6e-09 | 36.9 |
| ahya_s0011.g73.t1 | 2 | 2 | Ig_2 | 314 | 394 | 4.1e-20 | 71.7 | 4.7e-08 | 8.6e-05 | 22.6 |
| ahya_s0011.g73.t1 | 3 | 2 | ig | 317 | 391 | 6.4e-23 | 80.6 | 2.6e-08 | 4.7e-05 | 23.3 |
| ahya_s0011.g73.t1 | 3 | 3 | Ig_3 | 398 | 467 | 2.5e-40 | 136.8 | 4.9e-12 | 8.9e-09 | 35.7 |
| ahya_s0011.g73.t1 | 3 | 3 | I-set | 401 | 481 | 2.8e-35 | 120.1 | 1.6e-07 | 0.00029 | 20.7 |
| ahya_s0011.g73.t1 | 3 | 3 | ig | 406 | 466 | 6.4e-23 | 80.6 | 1.6e-08 | 2.8e-05 | 24.1 |
| ahya_s0011.g73.t1 | 1 | 1 | Gly_rich | 503 | 759 | 2.3e-08 | 34.2 | 1.2e-11 | 2.3e-08 | 34.2 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g73.t1 | Pfam | 148 | 200 | IPR008160 | Collagen triple helix repeat | ||
| ahya_s0011.g73.t1 | MobiDBLite | 148 | 214 | ||||
| ahya_s0011.g73.t1 | Pfam | 161 | 216 | IPR008160 | Collagen triple helix repeat | ||
| ahya_s0011.g73.t1 | Gene3D | 216 | 306 | IPR013783 | Immunoglobulin-like fold | ||
| ahya_s0011.g73.t1 | SUPERFAMILY | 220 | 311 | IPR036179 | Immunoglobulin-like domain ... | ||
| ahya_s0011.g73.t1 | ProSiteProfiles | 221 | 304 | IPR007110 | Immunoglobulin-like domain | ||
| ahya_s0011.g73.t1 | Pfam | 221 | 305 | IPR013098 | Immunoglobulin I-set | ||
| ahya_s0011.g73.t1 | SMART | 227 | 306 | IPR003599 | Immunoglobulin subtype | ||
| ahya_s0011.g73.t1 | SMART | 233 | 295 | IPR003598 | Immunoglobulin subtype 2 | ||
| ahya_s0011.g73.t1 | CDD | 238 | 301 | ||||
| ahya_s0011.g73.t1 | Gene3D | 307 | 390 | IPR013783 | Immunoglobulin-like fold | ||
| ahya_s0011.g73.t1 | Pfam | 308 | 381 | ||||
| ahya_s0011.g73.t1 | SUPERFAMILY | 308 | 403 | IPR036179 | Immunoglobulin-like domain ... | ||
| ahya_s0011.g73.t1 | ProSiteProfiles | 309 | 390 | IPR007110 | Immunoglobulin-like domain | ||
| ahya_s0011.g73.t1 | SMART | 315 | 395 | IPR003599 | Immunoglobulin subtype | ||
| ahya_s0011.g73.t1 | SMART | 321 | 384 | IPR003598 | Immunoglobulin subtype 2 | ||
| ahya_s0011.g73.t1 | CDD | 326 | 391 | ||||
| ahya_s0011.g73.t1 | Gene3D | 391 | 451 | IPR013783 | Immunoglobulin-like fold | ||
| ahya_s0011.g73.t1 | SUPERFAMILY | 394 | 481 | IPR036179 | Immunoglobulin-like domain ... | ||
| ahya_s0011.g73.t1 | Pfam | 398 | 467 | ||||
| ahya_s0011.g73.t1 | ProSiteProfiles | 398 | 466 | IPR007110 | Immunoglobulin-like domain | ||
| ahya_s0011.g73.t1 | SMART | 405 | 482 | IPR003599 | Immunoglobulin subtype | ||
| ahya_s0011.g73.t1 | SMART | 411 | 471 | IPR003598 | Immunoglobulin subtype 2 | ||
| ahya_s0011.g73.t1 | CDD | 416 | 478 | ||||
| ahya_s0011.g73.t1 | Gene3D | 452 | 592 | IPR013783 | Immunoglobulin-like fold | ||
| ahya_s0011.g73.t1 | Pfam | 503 | 759 | ||||
| ahya_s0011.g73.t1 | MobiDBLite | 623 | 657 | ||||
| ahya_s0011.g73.t1 | MobiDBLite | 697 | 748 |
Transcript
| Transcript ID | ahya_s0011.g73.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g73.t1 cgcattgcagcagtttccttcgaagctaattcaacgcgtcatggcgaaggaaaaagactcaccctgccagcaaaaaaata gcggtagtgcgtccaaattcgcttatacgttttgttttatttctgttttgatctgcgcagcggttttggtccgcgtggag atcataaaccagcgagtttacgcagtcgagaacagccttgcagaaatacgcaagcaaaatgctgataagaattcccatgg ctctggagaaagcttcaaacaagagaaaagagagaagtacaacaatggattaaatctcaacgacgaaagtgtcagagatt tgataactgatgaaaacgtgacgttgagaacccgcaggttttcaggaagagctccagatgaccccaagcttattatggaa gctatgagaaaggaaataaacaagaccatttcttctctcaagcctgaggcattttgctcatctttggaacaaacatgcgt gcaaggtccaccgggaattccaggttcgaaagggtctcgtggtgaaagaggacctgttggaagtactgggcaaaaaggat ctagaggattcacaggccatagtggagagtcgggaatcatgggtcctcccggtgaaaaaggggcacgaggagaaaaagga agtccaggccccagaggatatccgggtgcaaagggagatgccggggcaacgctttcagcccctacggtagtgatctcgcc gatgaaacaagtcgttaaagaaaatcagagtgctatcttccagtgttcagctactggaaatccaaaaccgagcgtgatgt gggttctatctgatccgaactggactagccatttcctgtatgagtcaaacggtacacttgaggttcgtgacgtgagtatt acagacgcaggagtatacacatgtgtcgctaaaaatgtgtttggtgcaatgaataaatcagcaattttaacagttgaagc gcctcctcgtgtccaacttgcctctggtcccacccacgccaaaattggtagaagggccaccctacctcgttgtaacgtga ctggatatcctgttcctgttgtgacgtggaggaaacttggcggggttttggcgacggaaagagccgtgtacggagagcga tcactaactctggttggtgcgagaaaaattgatacaggcctttatcaatgtagagcgaaaaataatcttggagaatcctc tgcacttacaacattggttgtttggactcaaccaaaatttatcttgacaccaccgagtagggttggcaaaaaaagtggcc agaatctgcttcttaactgcaaagcaacccctctagcttccgttttttggcgacgcgttgggggagattggatagcagac cgaatgaaagtgaaaaatgggacgttggagatttcttccctcacacagtgggattcagggtcttacgtgtgtgaagctag gctgctcttctatactatcagggctactactactttacgagttggtgccgattcctttaacctgacgacgagtggtcgca aaggaagatatggtgtaattcagaatttcactgttccaacaaccgggcggtacaaaatcaaggcatggggcgcacgggga ggaacacactcgagtaactatggtgaccggccagggacttactacggaggcaaaggagcgcttaaacagggcatatttac actgagtaaaggaacagtactgaatattgtggtgggacacagaggaggagattcagtagaggtaaagggaggtcggtcca ctagcaagactgcagctgaactgggtttgtctgtggaagacaatgctggaacagggggaggtggagggagttttgtttat acttccagtaacgttcttttgctagctgccggagggggagggggtgcgtctgctggatataatgggtcggaaggtcaggc aggtactagtgggagtagtagcgtagggaaggattcttccaaaagcagacgcggggggactggtggacagccaggtcagt gcaataacgtaggtgccagtttccatggaggggttggtgcgggttgggtgtcccagggctgtgcaagggcagattcatcc catggggagaggggtgggtcacgtgttcagggttgggtaggaggaagagccgggagaatgaatagtggaaataatggagg accaccccctggagcagtgggaggatttggcggtgggggaggaggatctgaagataacggtgcatcagggggtgggggtg gatactctggaggaggaagcggcacttacccaaatcaagccggagggggaggaggctcgtattgtagtggtgggagctgt tcgggtgcgtctggcggcaactcaaacgatgatggcatggtgcaaatagttgttttatatgactaaggaggaagatgtcc attgtttgttaatgcgtttgggtttttttttccatttgcatgtgacatttaacatttaagggaagctgtccaacaatggc tgatatagtgagattttcttacttgtgtagacttcatattttcatggtgtgatgggattttagattatagattgacgttt gctggaaccctaacttagggagtccccttccaaggacgtcgtcaacggcagcgacaacatcactcgaaagtgtaactctc caaagttcttcaatcatttttcaattattccaagtcatttaggttacgaaatgtgtaactacccaggaataaaattggca ttacaagattgaaaaaaatgaaaaagaatatccacgactgtgaaataggtctttttcacttcgttgacagggtaagcacg atagttgcacagaggacagacaatgaataacgttcgtgaaaaaagtaattttttttgcagttaaatatgcagttttgaag tgttcttgttgctggcgtaggcgaggattcttaagctcgcaaataaacataaattctctggtttttgtcttcataaccca acaagggataatagagcagtcttcaaatgacttgcaaaaaaacaataccaaagtgattactacaacctatcacagcagga gaaaacagggcgatgaaccaatcagaattgctaaccattacgcataacttgcttaaagcgcaggagaaatcgcgcgtaca atgtgcgattggttttggtttggcttctcatcggtcggaaaatttgagcgagatcttttatctaattactaaccaaagga atcgcaatcgcggaactgctttcgacagtcatttgaaaactcctctataaagtataaagatattcaaccactgttactca ggaataagtgagatcgcattttagatgatcgtaagttaacattaaacaggcaatattttgcaatgatagtttctaggcaa agggctaagggacaactaaaaagattactgatcgaagctagagttctcgataggaatcaaacctacgacctccgtaacgc tggtttgctgatcgatcgatccattcaactaaaaatgaaagaaatcctggtgagcttggttgcttagcgaggatcgtcta cacaaactgtctcgctagggctcaacaatgtcatttttgttcaacttgctatgcacctgctcgtttggacgcatttaacg tcgtcccaacggttttcctccatataggggaatacctgtttatcaattgtcctcgttagcataagcttgccattttcttg taagtcagcatttgatattgaaagcgcgttgtaagcttagttatcttggcaaatcttagcacaatgaatcaaatattcaa agagattagaatgcaaggctccttagcccttttgccatctactacttacgccttttctgaggactttttctttcccgacc atcccatcataaattcaggagctagtccgcgggttgatcagtccttcaccaatagaaggggtagtttagttaaatgggtt ttgttttatttgtgaaaccaaaagacacatttcaatgaaccttaatgtgaaattttcaagtcatgaaataaaggagattt gaatgt |
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Protein
| Protein ID | ahya_s0011.g73.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g73.t1 MAKEKDSPCQQKNSGSASKFAYTFCFISVLICAAVLVRVEIINQRVYAVENSLAEIRKQNADKNSHGSGESFKQEKREKY NNGLNLNDESVRDLITDENVTLRTRRFSGRAPDDPKLIMEAMRKEINKTISSLKPEAFCSSLEQTCVQGPPGIPGSKGSR GERGPVGSTGQKGSRGFTGHSGESGIMGPPGEKGARGEKGSPGPRGYPGAKGDAGATLSAPTVVISPMKQVVKENQSAIF QCSATGNPKPSVMWVLSDPNWTSHFLYESNGTLEVRDVSITDAGVYTCVAKNVFGAMNKSAILTVEAPPRVQLASGPTHA KIGRRATLPRCNVTGYPVPVVTWRKLGGVLATERAVYGERSLTLVGARKIDTGLYQCRAKNNLGESSALTTLVVWTQPKF ILTPPSRVGKKSGQNLLLNCKATPLASVFWRRVGGDWIADRMKVKNGTLEISSLTQWDSGSYVCEARLLFYTIRATTTLR VGADSFNLTTSGRKGRYGVIQNFTVPTTGRYKIKAWGARGGTHSSNYGDRPGTYYGGKGALKQGIFTLSKGTVLNIVVGH RGGDSVEVKGGRSTSKTAAELGLSVEDNAGTGGGGGSFVYTSSNVLLLAAGGGGGASAGYNGSEGQAGTSGSSSVGKDSS KSRRGGTGGQPGQCNNVGASFHGGVGAGWVSQGCARADSSHGERGGSRVQGWVGGRAGRMNSGNNGGPPPGAVGGFGGGG GGSEDNGASGGGGGYSGGGSGTYPNQAGGGGGSYCSGGSCSGASGGNSNDDGMVQIVVLYD |
|