Gene
| Gene Model ID | ahya_s0011.g92 |
|---|---|
| Locus | sc0000011 : 1963341 ... 1989161 : - |
| To GenomeBrowser | sc0000011:1963341..1989161 |
| Genes list of scaffold | sc0000011 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| ahya_s0011.g92.t1 | 1 | 1 | 2-oxogl_dehyd_N | 38 | 76 | 2.6e-19 | 68.4 | 6.3e-23 | 2.6e-19 | 68.4 |
| ahya_s0011.g92.t1 | 1 | 1 | E1_dh | 244 | 563 | 0.0 | 262.1 | 0.0 | 0.0 | 261.6 |
| ahya_s0011.g92.t1 | 1 | 1 | Transket_pyr | 637 | 849 | 0.0 | 218.4 | 0.0 | 0.0 | 217.7 |
| ahya_s0011.g92.t1 | 1 | 1 | OxoGdeHyase_C | 854 | 999 | 0.0 | 181.9 | 0.0 | 0.0 | 181.0 |
Results of InterPro Scan
| Gene Model ID | Analysis | Start | End | i_acc | i_desc | GO | Pathway |
|---|---|---|---|---|---|---|---|
| ahya_s0011.g92.t1 | PANTHER | 22 | 998 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| ahya_s0011.g92.t1 | PANTHER | 22 | 998 | ||||
| ahya_s0011.g92.t1 | PIRSF | 25 | 1000 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| ahya_s0011.g92.t1 | Pfam | 38 | 76 | IPR032106 | 2-oxoglutarate dehydrogenas... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 | |
| ahya_s0011.g92.t1 | TIGRFAM | 39 | 998 | IPR011603 | 2-oxoglutarate dehydrogenas... | GO:0004591|GO:0006099|GO:00... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 |
| ahya_s0011.g92.t1 | Gene3D | 111 | 202 | ||||
| ahya_s0011.g92.t1 | SUPERFAMILY | 156 | 581 | IPR029061 | Thiamin diphosphate-binding... | ||
| ahya_s0011.g92.t1 | Gene3D | 203 | 563 | ||||
| ahya_s0011.g92.t1 | Pfam | 244 | 563 | IPR001017 | Dehydrogenase, E1 component | GO:0008152|GO:0016624 | Reactome: R-HSA-389661 |
| ahya_s0011.g92.t1 | CDD | 250 | 513 | ||||
| ahya_s0011.g92.t1 | Gene3D | 633 | 863 | ||||
| ahya_s0011.g92.t1 | SUPERFAMILY | 633 | 856 | IPR029061 | Thiamin diphosphate-binding... | ||
| ahya_s0011.g92.t1 | Pfam | 637 | 849 | IPR005475 | Transketolase-like, pyrimid... | ||
| ahya_s0011.g92.t1 | SMART | 637 | 850 | IPR005475 | Transketolase-like, pyrimid... | ||
| ahya_s0011.g92.t1 | Pfam | 854 | 999 | IPR031717 | Multifunctional 2-oxoglutar... | KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 | |
| ahya_s0011.g92.t1 | MobiDBLite | 970 | 1000 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| ahya_s0011.g92.t1 | sp|Q02218|ODO1_HUMAN | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| ahya_s0011.g92.t1 | sp|Q148N0|ODO1_BOVIN | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| ahya_s0011.g92.t1 | sp|Q5RCB8|ODO1_PONAB | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| ahya_s0011.g92.t1 | sp|Q60HE2|ODO1_MACFA | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
| ahya_s0011.g92.t1 | sp|Q5XI78|ODO1_RAT | 2-oxoglutarate dehydrogenase, mitochondrial | 0.0 |
Transcript
| Transcript ID | ahya_s0011.g92.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g92.t1 atgacgtcactcaatcatatttttacactccaatttcgcacccctggtagatggaacgatgcaagtaatcctgtggatag gcgatgattctgtttgtgacagttttaacggaaaggagcagatgatcttggagtaattacatctatttgagaggaatact atcccgtggaatcgtattgttatatttggcgtctttttgctcaagtgaggacgaggcgaaagtttattacaagcccgccc aactgcgcagcgaacgacaactttaccaagtggagtttaaagtgaggcttccatcggctgtttaatgctctcgctaagct tattacaatctcatcttcgacaacgtaggacttatttgacgtttgaacaattcttaacaaggactaggacttgaattcgt acgatgtatgcggcgagatcgtggacacgatatttgaaaggcaatttgttgggttgtggcggaaaggtttcgtttatgcg atggaaccaaacggcagctttagtcgctcaggaaccatttttaagcggaagcaacagtaactatgtggaggaaatgtatt tatcgtggaaagaagaccctaaaagtgttcataggtcttgggatgcttattttcggcaagtgcagaatggcatgccacct ggccaagcctatcagcctccaccaatcctgggacagcaagctggaatggtcgcaacaagacaaactgttcccagtgcaac agaccaatcaacgatcaacagtttggtgtctgatcatttggctgtctattcattgatacgctgttatcagattcgaggcc accacattgctcagttggaccctcttggtatccttcaagcagatttgtctgataccaaacctgaagatctgtttttagaa tattggggactaggagagtcagatcttgataaagtctttcagcttccaaacaccacttttatcggtggtaatagcgaagt tcttactttgagagaaattatcgaaaggttggagactgcatactgtgggcacattggtttggattacatgtttatcccgg aaagatcaaaatgtgactggatcaggaagagatttgaaactcccggaatcataacattggacacagaggaaaagaaaact gtgcttaagagactcattcgatcaacagggtttgaagcctttcttgccaagaaatggagctcggagaagcgttttggaat cgagggctgcgaagttttgatcccagcaatgaaaatgattattgataagtccagtgaacttggtgttgaaagcatcatca tgggaatgccgcacagaggaaggcttaatgtcctggctaatgtttgccgcaaatctttagaacagctttttactcaattt gactcttcattggaggcttctgatgaaggatcaggagatgtgaaatatcatcttggaatgtcacatgaacgactaaacag agcgactaacaaactcattcgcttggccgttgttgcaaatccctcacatttggaagctgttgatccagtagttgaaggca aaacaagatccgagcagttctacaggggcgacacacaaggcaaaaaggtgatgagtgttctcatccatggtgatgcagca ttttctggacagggtgtggtgtatgagacatttcatctgagtgctctgccacagtacaccacccatggcaccattcatat tgtcgtgaacaaccagattggtttcaccacagatccgagagtcgcccgctcatctccttattgcactgatgtggccaagg ttgtcgatgccccaattttccatgtgaacgctgataatcctgaggcagtcatgcatgtctgcaaagtcgcagctgagtgg agggctgagtttggcaaagatgttgttattgatttggtttgttatcgtcgtcatggtcacaatgaaggggataatcccat gttcacacaaccaatcatgtacaagaacattgccaaaaagaattccgtgatggagttgtatgcgaaaaagcttcaggatg aaggcgtggtctccgaagaatgggtgcaggaggagaagtcaagttatgacaagatttgtgaagaatctttgcgggaagca aagagtgaaaagagagtgttgctgaacagagattggctggactcaccttggaaaggttttttcaagaaaggccactcgcc aactcaaccaatcagaccaactggtgtgactttagacacaatcaaacacattggaaatgtcatgagcgcttctcctggag gagacttcaaaattcacggaggtcttcgcagagttttgaaagcaaggcatgacctgttggaaaagggctacattgattgg gcgatgggcgaggcattggcgtttggttcgcttctgatggagggagtacatgtgagattaagtggtcaggatgtggagag aggaacgtttagccatcgacatcatgtccttcatcatcaagataaagacaaagtgacttacagtccgctgaatgacttga gtccggatcaagccatctacaccgtctgcaacagctctctgtctgaatttgcagtgttaggttttgagttgggttttagc atgactaatccttttgcgctcgtttgctgggaagctcagtttggggacttcaacaacaacgctcagtgtatcattgacca gtttattagtagtggacaagacaaatgggtcagacagagcggactggtaatgatgttacctcatggatacgaaggcatgg ggcctgagcactctagtgccagaccggaaagatttttgcaaatgagtaatgacaatccagatgtgttcccaactattgac gagttgttcgaagtgaatcagctgtatgccgccaactggcaggttgttaattgcagtacaccggccaacattttccacct tttccgtcgtcaaattgcgctgaactttcgtaaaccccttattctcctcacgccgaaaagtcttcttcggctggaagcgg ccaggtcgcatgtcgatgaaatgacagaaggaacttccttccaacgagtgattcccgactcgggcccagcctccaaaaat cccgagaaagttcggaagctacttttctgtactggcaaagtttactatgaacttgtaaaggagcgtaacaaaagaggttt agaggaagacattgccgttacacgagtagagcagatcagccctttcccctttgacttggtgagagccgaacaccagaagt acgacaatgcacaggtcgtctgggcgcaagaagagccaatgaacatgggatactggacttacgtcagcccacgacttctt aacgcagtgggacccaagccaaagatcagttatgctggtcgccctcctgctgcctcaactgctacaggaaacaaacagaa ccacatttctgaacaggaggaccttatcaataaagctttggagtaaactggatcatttcacgatttagcaagttttagcg agatggcagtcctctgaaccaaggagtattcgtactgtgctttattttggaactttaccttggtcaacaaagcttataat cgcttcttgtgtatttttaacctcttttatgcatcagatttcgctctgatatgggtgaagtgctcactaaatggatctcc gggataaggaaaaaactatttttagactgattgacaattagacaatagaagattgcctttcccgaatgaaatgacagctg gatttttttctctcatggtctgcagcgacttcaactccacagcacgtgatattatttttttttttttgtcttagaaactt atacttgaaatgcacgtaataaatggtgaaacgaaat |
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Protein
| Protein ID | ahya_s0011.g92.t1 |
|---|---|
| Definition | - |
>ahya_s0011.g92.t1 MYAARSWTRYLKGNLLGCGGKVSFMRWNQTAALVAQEPFLSGSNSNYVEEMYLSWKEDPKSVHRSWDAYFRQVQNGMPPG QAYQPPPILGQQAGMVATRQTVPSATDQSTINSLVSDHLAVYSLIRCYQIRGHHIAQLDPLGILQADLSDTKPEDLFLEY WGLGESDLDKVFQLPNTTFIGGNSEVLTLREIIERLETAYCGHIGLDYMFIPERSKCDWIRKRFETPGIITLDTEEKKTV LKRLIRSTGFEAFLAKKWSSEKRFGIEGCEVLIPAMKMIIDKSSELGVESIIMGMPHRGRLNVLANVCRKSLEQLFTQFD SSLEASDEGSGDVKYHLGMSHERLNRATNKLIRLAVVANPSHLEAVDPVVEGKTRSEQFYRGDTQGKKVMSVLIHGDAAF SGQGVVYETFHLSALPQYTTHGTIHIVVNNQIGFTTDPRVARSSPYCTDVAKVVDAPIFHVNADNPEAVMHVCKVAAEWR AEFGKDVVIDLVCYRRHGHNEGDNPMFTQPIMYKNIAKKNSVMELYAKKLQDEGVVSEEWVQEEKSSYDKICEESLREAK SEKRVLLNRDWLDSPWKGFFKKGHSPTQPIRPTGVTLDTIKHIGNVMSASPGGDFKIHGGLRRVLKARHDLLEKGYIDWA MGEALAFGSLLMEGVHVRLSGQDVERGTFSHRHHVLHHQDKDKVTYSPLNDLSPDQAIYTVCNSSLSEFAVLGFELGFSM TNPFALVCWEAQFGDFNNNAQCIIDQFISSGQDKWVRQSGLVMMLPHGYEGMGPEHSSARPERFLQMSNDNPDVFPTIDE LFEVNQLYAANWQVVNCSTPANIFHLFRRQIALNFRKPLILLTPKSLLRLEAARSHVDEMTEGTSFQRVIPDSGPASKNP EKVRKLLFCTGKVYYELVKERNKRGLEEDIAVTRVEQISPFPFDLVRAEHQKYDNAQVVWAQEEPMNMGYWTYVSPRLLN AVGPKPKISYAGRPPAASTATGNKQNHISEQEDLINKALE |
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