Cladosiphon okamuranus ver. 0.4

OIST Marine Genomics Unit since 2008

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publication
For those who utilize our genome and transcriptome data, please cite:
Nishitsuji, K., Arimoto, A., Iwai, K., Sudo, Y., Hisata, K., Fujie, M., Arakaki, N., Kushiro, T., Konishi, T., Shinzato, C., Satoh, N., Shouguchi, E.
A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of 'mozuku' biology.
DNA research Pubmed
Assembly v1.0 (732 scaffolds)
160208_2k_oki-S.fa.gz genome scaffold sequence
160208_2k_oki_prot.fa.gz genemodel protein sequence
160208_2k_oki_nucl.fa.gz genemodel nucleotide sequence

Cladosiphon okamuranus S-strain (541 scaffolds)
mozuku_scaffold.fa.gz genome scaffold
mozuku_genemodel_prot.fa.gz genemodel protein sequence
mozuku_genemodel_nucl.fa.gz genemodel nucleotide sequence
160227_A_Ban_oki-S.augustus3.codingseq.zip genemodel coding seq
160227_A_Ban_oki-S.augustus.gff3.zip genemodel gff

okinawa_mozuku_S_ver2
oki-S_chloroplast_genome_by_novoplasty.fa.gz Cladosiphon okamuranus Chloroplast genome
oki-S_mitochondria_genome_by_novoplasty.fa.gz Cladosiphon okamuranus mitochondria genome

Raw data
PRJDB4731 Link to NCBI BioProject

Transcriptome
mozuku_transcriptome.fa.gz Assembled transcriptome (59,590 contigs)

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