publication
For those who utilize our genome and transcriptome data, please cite:
Nishitsuji, K., Arimoto, A., Iwai, K., Sudo, Y., Hisata, K., Fujie, M., Arakaki, N., Kushiro, T., Konishi, T., Shinzato, C., Satoh, N., Shouguchi, E.
A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of 'mozuku' biology.
DNA research
A draft genome of the brown alga, Cladosiphon okamuranus, S-strain: a platform for future studies of 'mozuku' biology.
DNA research
Assembly v1.0 (732 scaffolds)
| 160208_2k_oki-S.fa.gz | genome scaffold sequence |
| 160208_2k_oki_prot.fa.gz | genemodel protein sequence |
| 160208_2k_oki_nucl.fa.gz | genemodel nucleotide sequence |
Cladosiphon okamuranus S-strain (541 scaffolds)
| mozuku_scaffold.fa.gz | genome scaffold |
| mozuku_genemodel_prot.fa.gz | genemodel protein sequence |
| mozuku_genemodel_nucl.fa.gz | genemodel nucleotide sequence |
| 160227_A_Ban_oki-S.augustus3.codingseq.zip | genemodel coding seq |
| 160227_A_Ban_oki-S.augustus.gff3.zip | genemodel gff |
okinawa_mozuku_S_ver2
| oki-S_chloroplast_genome_by_novoplasty.fa.gz | Cladosiphon okamuranus Chloroplast genome |
| oki-S_mitochondria_genome_by_novoplasty.fa.gz | Cladosiphon okamuranus mitochondria genome |
Raw data
| PRJDB4731 | Link to NCBI BioProject |
Transcriptome
| mozuku_transcriptome.fa.gz | Assembled transcriptome (59,590 contigs) |