Gene
Gene Model ID | aug_v2a.00023 |
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Locus | scaf16 : 19996 ... 23655 : + |
To GenomeBrowser | scaf16:19996..23655 |
Genes list of scaffold | scaf16 |
Manual annotation
Study field | Apoptosis |
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Gene name | Caspase12 |
Annotation by Blast2GO
Annotation | GO |
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caspase recruitment domain protein | GO:0003824 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00023.t1 | gi|156384811|ref|XP_001633326.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.00023.t1 | gi|156386389|ref|XP_001633895.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.00023.t1 | gi|339251366|ref|XP_003372705.1| | putative caspase recruitment domain protein [Trichinella spiralis] | 0.0 |
aug_v2a.00023.t1 | gi|548357376|ref|XP_005730782.1| | PREDICTED: caspase-9-like isoform X3 [Pundamilia nyererei] | 0.0 |
aug_v2a.00023.t1 | gi|705683329|ref|XP_010119496.1| | PREDICTED: caspase-2 isoform X1 [Chlamydotis macqueenii] | 0.0 |
Transcript
Transcript ID | aug_v2a.00023.t1 |
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Definition | - |
>aug_v2a.00023.t1 taattgtccaatggtacaccttgtcatatatttggttggaaatgaaaatgtaggaagtacatctcgaggaacagttcgtc atggataaaaaacatagagaacttttaagaaggaacagggagcgattagtggaagatctagaggcattgtcattgttgag ttatctctatcaagagcatactttgtccgaaaatgacgtcgaccttatcaaagctgagaggacaaggtcttcgcgggcag agaaactccttgacattataccgaggcgaggaccacaagcgttccacaacttttgtcgggccctagaaagaggagacgga cagaaccatcttctggctttgttgaaaacacctggatcggctccccagggtatgaatgagtgtgcatctgtaattcatag taattattgcaaccccaaggactttttatctgcacccgcccccaactaaggatgattattatttaagattggacccttga aaaggggacaaaattggaatgatgggatttttccagttgttgtcagaaaatgtcaaccgttaacagtttattgcaaccac gtcttagggatattcggacttctgacaagtcattacacactattatttttgcccatcagagggcggtctgaaatcaccca acaatgccaatgaatggctttgaagttcttctgttgatgaaaaatgttaattggcgtcgatatgaacgcctctttgaaat ccttaaactgaaaacgattcagaatttgaaaatgtataaaatggtgtccttcttccttaatgcatcacaaaattttactc ccctcaatctatacttttgccagaggtgtgagagttgttttaacagttactaagggttccagtatttgcatagttactaa ctatggtctttgtgggaagcgttcatacctcataatgtgagttatgtcaatcctttggctacttcaaagcacagaacata tgatttgacgcaaaagcataaatgtactcgatcgaagtctgactggctttgatgggatacctagcattctttaacatcac ctcagtcagtgctttgttttcataaggtgggctcataattttacaaacaccatactgtgaaaatggtacaaaaagagtta tcagtgttggcattcattgcatcttatagatagctgcctaatttgtttaagctgttatggttgttataggcagctaatat cttattaattaataagtttaaaaactaatgtgtctgatcttatttatatgtggtataaataaatgttatttttgttgtcc ctctttccttcctgtggtggtttattatttctacttttttttttcagggttagtgtcaagcacaatcactgaattcagca acaactcctttgtagactcagctgattacatgagcagtgttgcacatcatgtaacagctgggaaatctgatgttgcaact tcatctgcagtgaaaaataacagcaaattgccacaaaccactgaatacttcatataccccatgaaagaacaacctcatgg ctggtgcctgataatcaataatgttgattttgagcatcacaccagacgtggtggctcagatatagatgcaaagcagctca aggaactgtttactaatttacagtacaaggtccaagagcacagaaatcaaactgcagaacagcttaaaaacactgtgctt cagttttcaaagatgagtggccacaaagaagcagattccatggttttctgtcttctcagtcatggccttgaggggcaagt ttatggctgcgatggtgagttggtgtcaataagcgatctggttgcaatgtttaatggatatgaggctaaggatctgattg gtaaaccaaagatgattttcatccaagcatgtagaggagttgaatatgatcatggtgcagacctagaggtgacagacgat ggatttctctctaaaagtgacaaggtacacatcacacccacaaatgctgaaattcttaaggttgctattcccaatgacca ggcagagactttggttgaaccagaaactatccctgctgaagctgacatgctagttgcatattccacagttcctggttatg tgtcatggagtcatttgcagaaaggctcctggtttgtgcaagctctggttgatgtttttggnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccttgaaacatg ttgtgactttggtatttcatatcaatatttgatttgccccttactaagagtatcttaggaaaaaatctttagactcaaat attgtcttcctgggaaagggaagaaggaaaggcaaagaatagagagtgtggctggctggggatcaaagaatgagaaaggt tcttcaagctgtcatttatgcttactacttttcttcaaccctgtatgctacttccttgaagattgaaggcacatgtctat ttgaacttacagtcagtttccaagacatgctattctgtttggttgctctgttgccatttttttttaatttttcaaatatt caacaaagataagaaaaattaagggaggatacatgtacattatattccagggtcctattatttaaatcatgataagcatg gattaaaggaagtttttcaatcaaagatttttgtttggccttcaggtttaagttaacctagtttttccttcggcataaaa tttctttgttcacatttttcaatatttaatcccaggttcaaataaactgctgggttcagg |
Protein
Protein ID | aug_v2a.00023.t1 |
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Definition | - |
>aug_v2a.00023.t1 MDKKHRELLRRNRERLVEDLEALSLLSYLYQEHTLSENDVDLIKAERTRSSRAEKLLDIIPRRGPQAFHNFCRALERGDG QNHLLALLKTPGSAPQGLVSSTITEFSNNSFVDSADYMSSVAHHVTAGKSDVATSSAVKNNSKLPQTTEYFIYPMKEQPH GWCLIINNVDFEHHTRRGGSDIDAKQLKELFTNLQYKVQEHRNQTAEQLKNTVLQFSKMSGHKEADSMVFCLLSHGLEGQ VYGCDGELVSISDLVAMFNGYEAKDLIGKPKMIFIQACRGVEYDHGADLEVTDDGFLSKSDKVHITPTNAEILKVAIPND QAETLVEPETIPAEADMLVAYSTVPGYVSWSHLQKGSWFKLT* |