Gene
Gene Model ID | aug_v2a.00525 |
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Locus | scaf238 : 67476 ... 69238 : + |
To GenomeBrowser | scaf238:67476..69238 |
Genes list of scaffold | scaf238 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 83 |
Description | This gene model contains Retrotrans_gag domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00525.t1 | gi|548545910|ref|XP_005754187.1| | PREDICTED: uncharacterized protein LOC102215062 [Pundamilia nyererei] | 9.80909e-45 |
Transcript
Transcript ID | aug_v2a.00525.t1 |
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Definition | - |
>aug_v2a.00525.t1 gtattttctatttgtcctcttcgtttgcttgtaatatccttcagaatacaaaattggcgacgaggatgggatcaaaaatc tagaccgagaagcaaaaatggcggcgctcattggcaatattggtcctttcgacgaagagtcagagaaatttagtgattat gccaatcgttttgaagcctatgtggcggcgaatgacatcgataacgagaagaaggtgaatgtttttctagctgttatagg tccagatgcttataagttgttgaagaacttatgtgatcccgaaaatccgaataccaagacgtttacccggttgtcacagc tgttgcaagaacactttgaaccgactcctcttgtgattgcggagcggcacaagttttggacgacgtcgcaagaagaaggc gagagtgtgtcagaattcgtgataaaattgaaaaagttggcatcaacatgcagctttggtgcttttctgtctcaagccct aagagataggcttgtctctggactacatccgaaaatgtccagaacccaacgtcatctcctgtctataagagacttgacct attcgatggcccatgacaagtgtattgcagatgaaatggcaggcaaagcgaatatagagcacgtgggagattctgctaat agtgatgccgagaaggttcaacaagtctcttctagacgtaacgtggagcacaacagcaaaagggcagacaagtgcaaatc atgtggaagtatgcagcatgggtctgaatcgtgtagattccaaaatgccacatgccatcactatcagaagaaaggtcata ttcgcccaatatgtaaggcccgtttgtcacaaatgcagtttaacggaagatcaagcggtaaaaaggagtccaaagtgaac agttgcgatagcgtttctgatgatgaaagtgtaggaagctgtgacaaacatgcgaaagacacacctaaggatgcagctga agatgtggcatttggattatacagaactggaactgaacaattatccgctgagtctgtagatcgcgtcaaaccgtatgtag ggaatgttcagttaggtaagggacagattaattgtaagatggaagtaggtacgggtgcatctcgttctacagtgtctaag tatgtgtatgatgctgaattattagattatcccatggattctatcctgtcaggtattaagagtgtgatggtgagagttga cgaaattctggtggcaacatcaggtggaatcacccctcacatggaaataatcaaacaggtttttggaagactggcaaagc acaacgttaagttgaatggccttaagtgtcagttctttcaagctcaagtgacgtacatgggtcatattttgagtaaagag ggtatcagtcctgttaagagtaagctggatgcaattcgcctagcccctagaccttcaaatatgtctcaggttcggtcatt tctacgcatgttaaattattactcgaagctcatcaaggattttttatccaaaatgcacccactttaccaacttcttagca acaagactgaatggttgtggagcaaagagtgtgaaattgctttcttatgggccaaagaagttctctcgagttaacaagtt ctggtccattataacccacaaaagcctcttatactgagtgtggatgccagtccatatggcataggggcggtattaggtca tctgatggaagatggcactgagcggccggtagagtttacgtctcgcacgcttagcagtgcagaaaaaaattatggtcaga tag |
Protein
Protein ID | aug_v2a.00525.t1 |
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Definition | - |
>aug_v2a.00525.t1 MAALIGNIGPFDEESEKFSDYANRFEAYVAANDIDNEKKVNVFLAVIGPDAYKLLKNLCDPENPNTKTFTRLSQLLQEHF EPTPLVIAERHKFWTTSQEEGESVSEFVIKLKKLASTCSFGAFLSQALRDRLVSGLHPKMSRTQRHLLSIRDLTYSMAHD KCIADEMAGKANIEHVGDSANSDAEKVQQVSSRRNVEHNSKRADKCKSCGSMQHGSESCRFQNATCHHYQKKGHIRPICK ARLSQMQFNGRSSGKKESKVNSCDSVSDDESVGSCDKHAKDTPKDAAEDVAFGLYRTGTEQLSAESVDRVKPYVGNVQLG KGQINCKMEVGTGASRSTVSKYVYDAELLDYPMDSILSGIKSVMVRVDEILVATSGGITPHMEIIKQVFGRLAKHNVKLN GLKCQFFQAQVTYMGHILSKEGISPVKSKLDAIRLAPRPSNMSQVRSFLRMLNYYSKLIKDFLSKMHPLYQLLSNKTEWL WSKECEIAFLWAKEVLSS* |