Gene
Gene Model ID | aug_v2a.00616 |
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Locus | scaf267 : 42105 ... 52615 : - |
To GenomeBrowser | scaf267:42105..52615 |
Genes list of scaffold | scaf267 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-14 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains NB-ARC and NACHT domains. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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nod3 protein | GO:0044763 GO:0050794 GO:0050896 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00616.t1 | gi|754348876|ref|XP_004346834.2| | hypothetical protein CAOG_05149 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.00616.t1 | gi|532104412|ref|XP_005337799.1| | PREDICTED: protein NLRC3 [Ictidomys tridecemlineatus] | 0.0 |
Transcript
Transcript ID | aug_v2a.00616.t1 |
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Definition | - |
>aug_v2a.00616.t1 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncgtttgtcacatggctaaaatgacagcctgaaataggt aaggaaagtctcatttattgtgagcaaagctaactgctgcagactgtgcttatgtacatatatatttttaaattagtaaa gagacttgcactacttacaatacttacactgcttactgctcttgctgcacttacatcacttattactgacactactactt gcactattgacaatacatgttacaatacttgcactacttataatatgtatattacaattccacaaaaaggggaacagttc actgtatgcaatcatcaagaaaaattattgtggatataagtaatattactaatgaaggctgccatttattctgtgaatat cgagatagttattgcttttggcaatccatgactctaattgtatacttcacgtctgcatagatgacatggatccttgtaag gctctctgttttctcagcaaagatgaactaagtggtgaggtcaaaaggagatttatggcttctgctgttagtgttaatgg ccaaacttttttgttgacttcatcttctgcaatcaaggataaagataagcaagaaaaactcatattcaaacgatattcaa ggaagcattttggtcgctatacagtgaaggcttcattctttggggagtttggtgaatttacatttctaaggataaaagac acagtcaaaggtaatggtaagaactttgacatccaccggcttaatctcgaattaccacccttggaaagcctgaatgtgtt gacaagtccatgtgcaatggagaaatctaaatttgatttcaattgtgatggtgacatcaggaagatagaactgagtgaca aatctatagaagagacctcaatccttggtgctccaattatcattgagcagagtggccaattttgtgtcattggtgtagtg ggatggaccagcgaggagacactttgtccatgctactggaacaaagacacacatggtgagttttctttggtttgcactca ttcattcatttagttggactaatatttttaaagtgaaaaattcttccagttgagaatgcaactgtaatagtggcagtaaa tatgaggtggaaaaaacagcacagcttgaacccatgacagtgaggttctacattttaagttcttctttatgttctccaaa gtttaaattcttatgctcatcttgaagttcatgagtttgtgtgaagtagcacattgccttaaaaacaaaataatgcaaat aaattccttgatcacatgcatgtagttttggtcattcattttcgtaacatgatttaagacttgtgagacatttacagatc aatctcatgatgataataggttttttcctgaaaattctaccttagattattttgtactggtactgaactgtcctttgtac aaagtacatttactcatctcactgatttttagtcaaacttgtagacaccatctcaaactatactgttgtacccctgagca ggctgtgctgcctgcatgtagtcaacgcagaagtaacgtcaagcactaaataattagaatattatgggagattccctttc aatgaaaatactgtgcactgatatttagatcagatttctagttgtaatgtaaggaaagagggtatagaattcatttcatt actagcgctgttgcaaacagcatttcctatgggaatgcatcctctgatgattgtcttctttcttttctgatcatatttgg tctctgcttatcaaaaagatatgctatgtaagcaaatggatgtgcaagggaaaaaagttacagctgggaccaagaaacct gttgaaaaaggtaatggagcataattaactgcagtcttgaatgtaatgaaaaataatagaaattgtaattataatagcac caatgcaattaagttgaattataactaatgatgtaaagatttgtttgtagactgagattccaatttatttcagcttgatc ttttggaactgtaatccaagaccgatgcttgtataattttgtgtgttctagttgatggtagtttctaagagatcccattt ggccacatttcaaggcttttgtctcttgtcagtcttatgcataatttgtaacatacactgtactgtgttctagttacttc atatcttttatttatacttgttgttgtttgccaatttaaaggcacttcaaactgatgcaaaagtcagtgtcgccctttta attattactcaaagattaagcacagccattatcatgcatgagacaactgttatcatcatcttaatttgaaatttaaattt gtttactaggaaaatacacgtaataatgccattcagaccatccatgcatttacagaataaatcattacaagtccacccct acttttagttcttttaatatgtacattcttcatcttttggtgttggtttcataggacattttaaaagcttagtggatgga agtaaataaatattgtatttgtttcttccaaaaaattgctggtagcctgttttcttgccatacagtacctcttgtgaata aatggaagaagttttaaatgatcagtagtgttgctgacaacatttttctgtgaaatttaatgtttcactagttacagata attatgtaatgcaagaaaaacatgcagagattttgtttgagaacaagaaaaataaaactatgagaacacaaacgtgcact taggccacacacactgcctcctaccaaatggataaggggacagattggggatgtacagtagtcatcaaaggttaatatgt aaatgtcctatgtcccatggttaaatagacacgatggataaagagcaactgctgtagcatagtcccagaaccactgtgac tctttctgtttgtgttgcagcctcactgaaattatcaatcttttctttagccatactgtggcttggaatcggaagagaaa attgaataaaaatagtagaaatagtatttgaatggaaatagtgaaaatttactgcgatgatcactcttcactttcatctt taatatgcaaacaatttctgaatcagagactagtgaaactgtgtgccaagacagtatctttgatacaagtacttgtgctg tttcagtaacaaagagttgtgctatatctttttctgctttttgtttttcagttcttaaggcttgtagtttttggaactct gatacattagatgctattgttgaaagtgctatgttaaatgacactattgaatattggataagttcgtctgaattaccaca aaatattaatatacacggtgccaatattgctgtcaagttttttgttttgtattttgaagcgaaattaaaggggaacactt gtctgtagttggccttctagtaaattagcttttgagaggtttatccttcagaaggcacgtttaaacactggatttttgct tcattttcctaatctctgtttaggttgtgtttgtcacaatagcagatgtacaaaatattttttgatttcttgtaatgaag aactagtactaaagatacatagaactgatgatgcgaaatctcttgtacaaagagtttgtgagattgtaacaaacaagttg agctctgatacaacagtccattgtattcagttcatagcatgtacatgtcagataagtgaagaagcgaaacgaaagattct gggatgctagaaatcctcaaaacaaaacaaaaaagaaatggcagtgaaaaagaggaaatcttatgctgaactcgaacccg taaaaagaactctgtttggagaggttttgtcattattacaataatgttaaaaacaaaaaggaagactgcaaagacttata ttcctgtaactcatgttttcaaaaaaaaaanaaaaaaggaaatcagagatgtatnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnagt cggcgacactgccgacctgcaaacaataatttaccatttcagtagattttgagtttgttgcatgctttccaagcgaattt caagcttaagttagtttctcgtcagcgaaatgacagagaacccaacggcgaagtgtataaaattttggttttgcgtgacg cttttggcgttgtttttcaatcggcgacactttcgatctggcaatgataatttattatttcggtcgaaattgagtttgtt gtatgctttccaagcgaattcaagcattggtatgtttatcgtgagcgaaatgacagagaacccaacggcgaaatatgaat tccgaaattttggtttcgtgcgagcctgttgattattttcgggcgcacaagtcgtctccgttgctcctataaacttggct gtgttccaaattatgcaagcttctcggatttagtgttatttcacttaaaaagaacgtgtctacagaaatttaagaagagt taacaggaaaaaaaaaatttaaaaagaatctgtagttaataagcaatttgcatgtttctcaacccgcgaagggtctgggc cctatcgaatattaattagtcttgttgactatcaatcagctggacccccaaaacttagcaatggacccccaaatttttca agaaggggtccagaggaccccataatttgaaaacctggatacatctctgggaaatgaaggtccagattacatatgttctg tctggtgtttggtcaattaccatgttaatcaggaaaaacttttcttccctcgcgtttcacagagcgcgcgttgcttgttg ctcctcgcgcaaacatgaatgaaagctcgccttgaataacgcaaagaaaatccataactgtgctgattatttctaacttg acttcatacaccattcctcccagaatttatatattctcagaatatctccctcaattccgcgtgcacagaaaagagcgcga tctaaccattctacctatctccttctcagtaaatgccaataagcgttcttttttaaattaggttttagcttttaagttat agtatttttaacagaggctttacatgcatgcatacatatacatatcattcattcattttattgtaataattattttaaac attgtaatgtaaagcgcattagatcatatgcctatgtattttgcactagataaataataaagttatgttaaagagatttg ataagtatagtggccaagctcaccagaatcataatagtattttgagtgactggaataacagagctcgtagggttgatttg tacctagaactctgaaacatttttatctgatcaagaaaccatatcaccttgaccatttaaaatttattgtttgaatagga acttcttctgagactgagatcacagcacaggcagtgggaaagggggagctgaaactgaatgaggacctcacaggtataca aagaatggttaaaagtttacagctggtagaagtagtagcatgcttgatccatcaaaagtaacagaggaaacttacaatcc taagaagcccaataattattttagtgacatacttgatttgtatgttttcctaaaaacattgtaaacggaagaaagattat ttagagaaacaagatgtttcttgaacagataaacttcataatcccttatgagaagaattggcttgaacaaggtagttatt tatattatactagaaaatccatttcatgagtaacttatgcagttatgcaaaaaacggctagctgaaaaaaagtcaaggct aaaatgggacttgagcccgtgagctgcgagattgtgctgcacactgctctatcatcagagctatgaatatctgggaggtg atcagatgcaaactcagtaaatgttttgttccccagacttagtgagtaatgacaaataccctataggagcactttatatg gaatgtcatgcattgaagaatttaaaatatctctctaacatcatagctttatatatgtgatatttcataaatcatactct tcttcacggaagttgcccatgaaaaaaatagcagtactattcattcgacaaagacttacaggaaaatatttcaagtttat gaaacttcatgcgactcataaaagatttagattttataaacagattttcagtagcataaaagcgttttgtgtagttcgtg actggtgtactgtcacgttatgttctatgcaatagcattttttactaaaggataacacattttgtttgacattgtccgca ggccgttctccatgtgtttctccccaaacaaaaagagggataattgaaaggaacgagcgtgagcagctagcaggtacagt ccataaaatgtggcaataaaattagttgccaaggaaatgataatgataaggaaatttttctattctttttttgaggcttc gacttcttagcagcttgataaacccaatgaatttgagaaatctttggcttgcgatctccattttgtttgtgccagcaaga aaacattatctcatgcacagataaatatttttggttataattatgttttagttggctcgtacagaacgtgaacggtcatt aatattgtgttcctttcctgaaagaagtgtgaaaagagaaaactacattgaccccaaaacgtatatgagagtacgttgaa gggttcttaacatgtaagttatgaaaccaggatatcctgatctattgaaaaattaaaatcgnnnnnnnnnnnnnnnnnnn nnngccatgtgatataacaatccaggtgacccgtagcgttctaattgatcaaagatccatggtttattgttcggctaaac taacacctataataactggcaatcacttgtatgatgagtagctaaaatttgatcactgcattgaaataaagtatatggtt ttataaattgattgctgcttttattctttttttgttgcagctcgtgcttcgtgcccatgccacgtcatagagggaataaa acaagtttaccagaagtgtgaaggggtgattttgccagttccttggtgtgacgatttcaatttccagatagaggacattt tcaccagacttatgatagttgcaaaagaaaagacacgcggaatagcgaccacaaaagaactcaccaacatgacgagtgtc ttcataccacacgagtgttccaaacagccgctgattgtgttgattgaaggcgaacctggcatgggaaagaccacctattg ccaaaaactggcatttgattgggcaagcaaacagtgtggcaaatgggatgagtcttttccaagagttgatgtgctcttgt tcctcagatgtcgcagaatgaaatctaccctctggaacgctgttgaagaacaaattctgccagatgaagttaagccgggc gaaaaagagatgtttttccagttcttgaaagaaaatccctccaaggtgttgcttgtgctcgatgggttagacgaggcaga cccacaacaactggacatgtgcttgaaagttattcaaaggaagcagcttcctggttgttacattgttctcacatctcgcc aggaaacggggaataaagtgaggatgtacaccgacactttgttaaagattgtgggtttcacaacaactgatgcggagtgt tacataagaaagtattttcaagacaaggaacacttggcagaagcacttatttcaaaagttaagtttgacagggatttaag ggaactaacacaaaatcctttaaacactcttctgctctgtgttatcttcgaggatttaaagggaattctaccaaccaaca ggacgcagctttacggggagattgttcgttttattttgagacgttatgaaagcaagaacggcttatcaaatagaggcaaa gaccttttattagtttacaagaaggaactgatgatcctaggggaaactgcgctagattctctgcataaaaaagagctgta tttcgatgaccacaaaggagatatgaaggaaagtttgttgaagaagtctggctttctctcgatccagtcgggtggtagca agagagctccttgcgaccgttatggtttttttcataagagttttcaagaattcttttccggttacttccttggcttttct ctcattgatggtgttacaaactctcactcagtactgaccgatgagagattcacggatcaactattttatgtttttagatt catgagtggaatcgtagttcagcaatctgaggaaactgcagtgtcagttgtacaaagtattgcttcaattgtaaatgaga ctggtggcaaagagcgtgaattcctttctaagttaaattttgctaatatcttaatttaccaatgcaaaacttgttcagaa gacctctacaaaaaattagttcgtgttcttggcgagagtcttcagttggtcggtgtggatgcggggccttcctccttcct gtcaaacagtgaatttatgggcatctttttcgaggccctcacttttaactgcaccctttctaagttgtttttgtatcagt gcaggtttagtattaaggttatcaatctgctcgctcaggcgctcagcgtcaacacatctctttcttctttggtcttgcaa cgcaattccattggtgctgacgcagcaaattcacttgcccaggccctcagagtaaacagatctctgtctattttggactt gtcgtggaatggcattggttttgagggagcatattcacttgcccaggcgctcacagtaaacacctcactttcgtttttgg gtttgactcaagcttccattgatgacaagagagcaaatttactggctgatgccctcagagtaaacacttctctttcttct ttaattttagatttcaactgcattggtgctgagggagcaaattcacttgctcaggccctcaaagaaaactgctctctttc ttctttggttttgtctatgaactccattggtgatgagggaacaaattcccttgctcaggccctcagagtaaacacctctc tttcttctttgcatctgcatcgcaactccattggtgctgagggagcaaattcacttgctcaggccctgagagtaaacacc tctctttcatccttggatttgtctttcaattccattggtgatgagggagcaaattcacttgctcaagccnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtctctttcctctttaaagttagcccgcaattccattggtgatgagggag caaattcaattgctcacgccctcggagaagacatccctctttctactttggatttggcttccaattccattggtgatgag ggagcaaattcacttgctcaggccctcgaagttaacacctcacttaattggttgggtttgagccataattcctttggtga cgagggagcaaattcacttactaaggcccgcaaagtaaacgcctctctttcttttttgggtttgggttacaaatccattg atgagggagcaaattgacttgctcaggctcccagagtaatgtttccttgaacactaggaactcctagtttacattaattg gcgtcctctttcttcctggtcacgaagcatagacggattaaggagggattaatcttgaaggtttcactcactttaaagtg tggaagaagaagatgcattgctttcaaagtccaagcctaaaagtgcacaatacggagacaagtcaggcgctaagattttc agaaattggtgagtaaaacacgagctaatta |
Protein
Protein ID | aug_v2a.00616.t1 |
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Definition | - |
>aug_v2a.00616.t1 MDPCKALCFLSKDELSGEVKRRFMASAVSVNGQTFLLTSSSAIKDKDKQEKLIFKRYSRKHFGRYTVKASFFGEFGEFTF LRIKDTVKGNGKNFDIHRLNLELPPLESLNVLTSPCAMEKSKFDFNCDGDIRKIELSDKSIEETSILGAPIIIEQSGQFC VIGVVGWTSEETLCPCYWNKDTHDMLCKQMDVQGKKVTAGTKKPVEKGTSSETEITAQAVGKGELKLNEDLTGRSPCVSP QTKRGIIERNEREQLAARASCPCHVIEGIKQVYQKCEGVILPVPWCDDFNFQIEDIFTRLMIVAKEKTRGIATTKELTNM TSVFIPHECSKQPLIVLIEGEPGMGKTTYCQKLAFDWASKQCGKWDESFPRVDVLLFLRCRRMKSTLWNAVEEQILPDEV KPGEKEMFFQFLKENPSKVLLVLDGLDEADPQQLDMCLKVIQRKQLPGCYIVLTSRQETGNKVRMYTDTLLKIVGFTTTD AECYIRKYFQDKEHLAEALISKVKFDRDLRELTQNPLNTLLLCVIFEDLKGILPTNRTQLYGEIVRFILRRYESKNGLSN RGKDLLLVYKKELMILGETALDSLHKKELYFDDHKGDMKESLLKKSGFLSIQSGGSKRAPCDRYGFFHKSFQEFFSGYFL GFSLIDGVTNSHSVLTDERFTDQLFYVFRFMSGIVVQQSEETAVSVVQSIASIVNETGGKEREFLSKLNFANILIYQCKT CSEDLYKKLVRVLGESLQLVGVDAGPSSFLSNSEFMGIFFEALTFNCTLSKLFLYQCRFSIKVINLLAQALSVNTSLSSL VLQRNSIGADAANSLAQALRVNRSLSILDLSWNGIGFEGAYSLAQALTVNTSLSFLGLTQASIDDKRANLLADALRVNTS LSSLILDFNCIGAEGANSLAQALKENCSLSSLVLSMNSIGDEGTNSLAQALRVNTSLSSLHLHRNSIGAEGANSLAQALR LARNSIGDEGANSIAHALGEDIPLSTLDLASNSIGDEGANSLAQALEVNTSLNWLGLSHNSFGDEGANSLTKARKVNASL SFLGLGYKSIDEGAN* |