Gene
Gene Model ID | aug_v2a.00824 |
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Locus | scaf341 : 45992 ... 49518 : - |
To GenomeBrowser | scaf341:45992..49518 |
Genes list of scaffold | scaf341 |
Manual annotation
Study field | Apoptosis |
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Gene name | Adaptor TRAF family27 |
Annotation by Blast2GO
Annotation | GO |
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tnf receptor-associated factor 6 | GO:0002682 GO:0006355 GO:0006955 GO:0007165 GO:0016567 GO:0019899 GO:0031325 GO:0044093 GO:0044424 GO:0046872 GO:0048513 GO:0048584 GO:0051240 GO:0051247 |
Transcript
Transcript ID | aug_v2a.00824.t2 |
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Definition | - |
>aug_v2a.00824.t2 atgcaagatcacaatgagaaagagtgtccaagggcggagctcaagtgtcctttcaatgtcgtgggctgtccatttgaggt acaacaagcatttttttttctcgcaaaatatagaagaggcagcgttattataaggaattaatagatactgacgatcaaat ttagtattcttttgctatattgctaatatgcctttctaaccttgctaccttgggcaaacatttgattagaaattaaacca aagtaaggccagtagatgtaattaacataaatctaaaaaaatgaacagaacattaaatggccgcgcggggacacagattt tatcttcgagtatcatgagaggaatactttcagcaggaggagataaaattcccatcccctagaggccatgtaatgttctg ttcattttgtagatactgataaaatgtccacatttacttttcattttcaaaacagtgaaatagtgcaattaaagtggtca cctatcgcaaaatgcctgtcaccaaaacgttatgaaactcgttataaaggcgatataaagtcaataatacttatatttgc cgtttcaaaaagtgcaaattctaatgaagaagagaaaagttctacaacagcaaaagcgtatttcaaaaaagccattttgt gaataaaatttgaaaagggccggcggcgcgcctgagcgggaagctctcttgtaattggctaagcatattagtaaccatgg cgacaccaatatcatcacacgtgaatgataaaaatcaatcttgctatttcatcatataataatgatagaggtgtaacgtt ttactgtgggaataccgactccattgtttatttgctccattgatttcaagttggacaagagtgcttccaggttttttttt ttgtcttgtttctttgctgttgttttttcacgttgggtatttgattccttcaaaagggaactcgcccagcagtcaatgaa catgttaagaagaagatgttaagtcatttgatggacttcacaaaggaattcggagcattgacgattgagcggccaggcct tcaagcaccaaagagtctctctcgacgcaccaggggtggggtagaagcccaggagcaggctagtcaagacgtgcttctca tgaatttggcgacattgtgtcaacgacagcaaacggaaatcgatgaattgagacgccttgttaatgagacaaaaggcgtg gtggagcatttgggacgctgccttaatgaatcgtgcatgacgccgttgcaagaacttactaacaggttggtgagatgtta cgtgatcgcgcagtgactccttggaaatccactgctcgcggtgctaacagccatcgctgctacctttgttgcgttcgcac ggcgtaagctctgtgtcagcgatgtaaacgagaaattcgccattccttctagactcctgagatctcagaattcttttgcc gcgagcttaatcgtaatctattctaattgttcacggtgttaatggtgcaacactaacttagaggcagtcataggttaatt cgtcgtcataagtgaggggctctaatcttttgcaggtggcagtactttcctccactgttgcctagcactgatctctccag ggattccatcccgcaactgcccgcacggttgtttagtacgttaccaactgatccgttgcaggcagtgaattcacgtcttc agtgatctcaggaaccacggttcaaactgttcgagaagatttgactcatcagctttgttggaaagatgtttgaatcgtat gtgaccagcaattaatggttcttatttcagtcagtcttgcagcacgagctggtggatttccgaaatccctgtcatcagat tcgtttagggaaaggtgcaaaatttgcagaggtcaagcttcgctcagccacgcatctgcttctcataaaaacacgaaaat ttgggttatagttatctggtttttatctctcgaaatagtgtaatagtgaagaagtaaatgaaattctgagttgaaatcca aaaactttcgaaggggtttcgcaaaaggcaaattttatcccgacctttgccgcatgcggaaacttgaagcttcctcttaa tatcgtttcttcagcgaacccgggtcgattcaatgccagaatcattgcaagcgaagacatcgcttgattacactaagagt tttcatatcttggatgagctctctttgtccacgacacgtttttgttcagttttggtgtttttctgctacagcgcactaaa tacaaaaaaatcttcgctgtaaatctgatgggttgtttctgtggtaactgcacgagttaactcctcttctttctagtctt cctcgaacaaaaaaacaaatggatcagtaaggtcgcaactggataaaaataagaaatttttatcatgcggccgcaggata aaaatctgctttcttttgttaggatcaaccgtcaagaaacgagagcgtttgaattcgaagggcgtgtgtgcaatggctct tatatctggaagattgaaaactaccgacagcgtcgtcaggacgccctcagcggcattgcgacggctctacacagcccagc cttctatactagcctctatggttacaagctgtgcttgcgtatcaacttgaatggcgtggattgtggagatggaagataca tagctctctttgtgcacatgatgaacggcgattatgatagcgttcttgagtggccgtttaccggaaggatcacccttacc atcttggaccaatccgagggcaccgaatttcgtcagcacatcagcgagacccttattgccaagcccaacctgttggcctt tcagcggccaacagctccgcgcaactacaagggctatggctacgtggagtttgctccgatcgagcacatccgagatcccc agtacgttaaaaacaataccatgctggttcgcgtgcagattgatcattgagaaaccattcgcactaattcagcatttatg gcctcaagcgcggatgtggtcggatttgtggggttggacgccatgtcatcataatagttcagttattttctttttccatg tccggtggagacttttggacaccgttttgttcacgttaggattaataagcaattcatgtcatagccttttaagtgagtgc tcaagaacacagtgcatcatttcagctagcacagtaacaaagatcatgatgcaataggccactttcgaattgtgcaaaaa caaaaggacaaaggccaggctgagaggactagtttgcgatttcctttgaaaaaacaaagaaaaatgcaaaattgtcctct caacgtgactttgttctttttgttcttacacatttcgaaagtggcctattggcgaattgaagcacggttttcacgttgga caaatagaaaccatgatcgcgaatcacaagaaacaaataaggtcctttaggctcacgtgaaaaccaggacctcaaagtag ggctggggctaactaataagccgatcagtttgttaacatacgcaccctcccatccacctatccggggaataaaccgcaga aacactg |
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Transcript ID | aug_v2a.00824.t1 |
Definition | - |
>aug_v2a.00824.t1 atgcaagatcacaatgagaaagagtgtccaagggcggagctcaagtgtcctttcaatgtcgtgggctgtccatttgaggt acaacaagcatttttttttctcgcaaaatatagaagaggcagcgttattataaggaattaatagatactgacgatcaaat ttagtattcttttgctatattgctaatatgcctttctaaccttgctaccttgggcaaacatttgattagaaattaaacca aagtaaggccagtagatgtaattaacataaatctaaaaaaatgaacagaacattaaatggccgcgcggggacacagattt tatcttcgagtatcatgagaggaatactttcagcaggaggagataaaattcccatcccctagaggccatgtaatgttctg ttcattttgtagatactgataaaatgtccacatttacttttcattttcaaaacagtgaaatagtgcaattaaagtggtca cctatcgcaaaatgcctgtcaccaaaacgttatgaaactcgttataaaggcgatataaagtcaataatacttatatttgc cgtttcaaaaagtgcaaattctaatgaagaagagaaaagttctacaacagcaaaagcgtatttcaaaaaagccattttgt gaataaaatttgaaaagggccggcggcgcgcctgagcgggaagctctcttgtaattggctaagcatattagtaaccatgg cgacaccaatatcatcacacgtgaatgataaaaatcaatcttgctatttcatcatataataatgatagaggtgtaacgtt ttactgtgggaataccgactccattgtttatttgctccattgatttcaagttggacaagagtgcttccaggttttttttt ttgtcttgtttctttgctgttgttttttcacgttgggtatttgattccttcaaaagggaactcgcccagcagtcaatgaa catgttaagaagaagatgttaagtcatttgatggacttcacaaaggaattcggagcattgacgattgagcggccaggcct tcaagcaccaaagagtctctctcgacgcaccaggggtggggtagaagcccaggagcaggctagtcaagacgtgcttctca tgaatttggcgacattgtgtcaacgacagcaaacggaaatcgatgaattgagacgccttgttaatgagacaaaaggcgtg gtggagcatttgggacgctgccttaatgaatcgtgcatgacgccgttgcaagaacttactaacaggttggtgagatgtta cgtgatcgcgcagtgactccttggaaatccactgctcgcggtgctaacagccatcgctgctacctttgttgcgttcgcac ggcgtaagctctgtgtcagcgatgtaaacgagaaattcgccattccttctagactcctgagatctcagaattcttttgcc gcgagcttaatcgtaatctattctaattgttcacggtgttaatggtgcaacactaacttagaggcagtcataggttaatt cgtcgtcataagtgaggggctctaatcttttgcaggtggcagtactttcctccactgttgcctagcactgatctctccag ggattccatcccgcaactgcccgcacggttgtttagtacgttaccaactgatccgttgcaggcagtgaattcacgtcttc agtgatctcaggaaccacggttcaaactgttcgagaagatttgactcatcagctttgttggaaagatgtttgaatcgtat gtgaccagcaattaatggttcttatttcagtcagtcttgcagcacgagctggtggatttccgaaatccctgtcatcagat tcgtttagggaaaggtgcaaaatttgcagaggtcaagcttcgctcagccacgcatctgcttctcataaaaacacgaaaat ttgggttatagttatctggtttttatctctcgaaatagtgtaatagtgaagaagtaaatgaaattctgagttgaaatcca aaaactttcgaaggggtttcgcaaaaggcaaattttatcccgacctttgccgcatgcggaaacttgaagcttcctcttaa tatcgtttcttcagcgaacccgggtcgattcaatgccagaatcattgcaagcgaagacatcgcttgattacactaagagt tttcatatcttggatgagctctctttgtccacgacacgtttttgttcagttttggtgtttttctgctacagcgcactaaa tacaaaaaaatcttcgctgtaaatctgatgggttgtttctgtggtaactgcacgagttaactcctcttctttctagtctt cctcgaacaaaaaaacaaatggatcagtaaggtcgcaactggataaaaataagaaatttttatcatgcggccgcaggata aaaatctgctttcttttgttaggatcaaccgtcaagaaacgagagcgtttgaattcgaagggcgtgtgtgcaatggctct tatatctggaagattgaaaactaccgacagcgtcgtcaggacgccctcagcggcattgcgacggctctacacagcccagc cttctatactagcctctatggttacaagctgtgcttgcgtatcaacttgaatggcgtggattgtggagatggaagataca tagctctctttgtgcacatgatgaacggcgattatgatagcgttcttgagtggccgtttaccggaaggatcacccttacc atcttggaccaatccgagggcaccgaatttcgtcagcacatcagcgagacccttattgccaagcccaacctgttggcctt tcagcggccaacagctccgcgcaactacaagggctatggctacgtggagtttgctccgatcgagcacatccgagatcccc agtacgttaaaaacaataccatgctggttcgcgtgcagattgatcattgagaaaccattcgcactaattcagcatttatg gcctcaagcgcggatgtggtcggatttgtggggttggacgccatgtcatcataatagttcagttattttctttttccatg tccggtggagacttttggacaccgttttgttcacgttaggattaataagcaattcatgtcatagccttttaagtgagtgc tcaagaacacagtgcatcatttcagctagcacagtaacaaagatcatgatgcaataggccactttcgaattgtgcaaaaa caaaaggacaaaggccaggctgagaggactagtttgcgatttcctttgaaaaaacaaagaaaaatgcaaaattgtcctct caacgtgactttgttctttttgttcttacacatttcgaaagtggcctattggcgaattgaagcacggttttcacgttgga caaatagaaaccatgatcgcgaatcacaagaaacaaataaggtcctttaggctcacgtgaaaaccaggacctcaaagtag ggctggggctaactaataagccgatcagtttgttaacatacgcaccctcccatccacctatccggggaataaaccgcaga aacactg |
Protein
Protein ID | aug_v2a.00824.t2 |
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Definition | - |
>aug_v2a.00824.t2 MQDHNEKECPRAELKCPFNVVGCPFEGTRPAVNEHVKKKMLSHLMDFTKEFGALTIERPGLQAPKSLSRRTRGGVEAQEQ ASQDVLLMNLATLCQRQQTEIDELRRLVNETKGVVEHLGRCLNESCMTPLQELTNRWQYFPPLLPSTDLSRDSIPQLPAR LFISLAARAGGFPKSLSSDSFRERINRQETRAFEFEGRVCNGSYIWKIENYRQRRQDALSGIATALHSPAFYTSLYGYKL CLRINLNGVDCGDGRYIALFVHMMNGDYDSVLEWPFTGRITLTILDQSEGTEFRQHISETLIAKPNLLAFQRPTAPRNYK GYGYVEFAPIEHIRDPQYVKNNTMLVRVQIDH* |
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Protein ID | aug_v2a.00824.t1 |
Definition | - |
>aug_v2a.00824.t1 MQDHNEKECPRAELKCPFNVVGCPFEGTRPAVNEHVKKKMLSHLMDFTKEFGALTIERPGLQAPKSLSRRTRGGVEAQEQ ASQDVLLMNLATLCQRQQTEIDELRRLVNETKGVVEHLGRCLNESCMTPLQELTNRINRQETRAFEFEGRVCNGSYIWKI ENYRQRRQDALSGIATALHSPAFYTSLYGYKLCLRINLNGVDCGDGRYIALFVHMMNGDYDSVLEWPFTGRITLTILDQS EGTEFRQHISETLIAKPNLLAFQRPTAPRNYKGYGYVEFAPIEHIRDPQYVKNNTMLVRVQIDH* |