Gene
Gene Model ID | aug_v2a.00949 |
---|---|
Locus | scaf384 : 41672 ... 46415 : - |
To GenomeBrowser | scaf384:41672..46415 |
Genes list of scaffold | scaf384 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
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tropomyosin 4 | GO:0005737 GO:0015629 GO:0043234 GO:0044430 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.00949.t1 | gi|339254856|ref|XP_003372651.1| | tropomyosin [Trichinella spiralis] | 1.0e-18 |
aug_v2a.00949.t1 | gi|597783679|ref|XP_007255358.1| | PREDICTED: tropomyosin alpha-4 chain-like isoform X6 [Astyanax mexicanus] | 2.0e-18 |
aug_v2a.00949.t1 | gi|564250646|ref|XP_006264388.1| | PREDICTED: tropomyosin alpha-3 chain-like isoform X12 [Alligator mississippiensis] | 2.0e-18 |
aug_v2a.00949.t1 | gi|564250642|ref|XP_006264386.1| | PREDICTED: tropomyosin alpha-3 chain-like isoform X10 [Alligator mississippiensis] | 5.0e-18 |
aug_v2a.00949.t1 | gi|47894398|ref|NP_001001491.1| | tropomyosin alpha-4 chain [Mus musculus] | 5.0e-18 |
Transcript
Transcript ID | aug_v2a.00949.t1 |
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Definition | - |
>aug_v2a.00949.t1 gtaatagtttcaatcggccttcctttaacaggatggaggtgttggcgttatagaagattctgttttggaagtcttaaagc aaggaaacgaacccaaggtatcattataggtgtcttttattttatcttattagtttatctcaaaactttaattagctata cgagaaatcgccagtatctgatgattgggcattatttgtgcttgtttaacctgtggatcatttgatgctcatgagatttt ctttcaataggctgtttatttaaacctttctgagacgaacatcgtcgtcacggatcaagaaacgtcaaaggtcagaaaaa catatctgcctccatgcgtttccaaatcggaagaaactagcccgaaaaaaaacaaattttcaattctgaaaggcaaagga ggaataatgtgacatatattcatctggtattttcaggttttgggagttcattcctttaccgagacttccgcttgtggcca aagagaggactgcaaacatctcattgctttcgtttcagggtaactagttagtgataacttgaagttgaatcttttttttg ttttttgttgttgttgttttttgtggaatacacttctcttcagttcatgggcaactattggtttctcatatggtaatctt tggtttgttttgaagtgatattttggctgagctttcgacatcttagtttgtgagaaaatgatttcagcttttgaaacgat tctatggtacatttcaacctttcggttctttgtggttcggatctcgccatccaaatgcggttttgtactcttttctactc tgccccgaggtttttcttggagtactgttagtcttcccaacgcgtgcactggtttgatttggccattgtcaatcttctta tttacagtcttcctaattagcatagcaccagaactcgcctagatacggtttaaatacataaagtgattacgttgtatttt ggactatataggtacaagtaaatgtaggtcaaagttcgtactttatatgaacaacgcatcgatgtggatgaaacttggtt gttgattaaacaacactcaataaatctgattttattttgttcagggaatcgtcgtgtgctctggccaagaacttctactg ttacgtgtatgaaatgaaatctgaaagaatagtaagtttttacaattttcacgttttgaagcacgaagcatcaccgcgaa aatcttgttaccatggctgggttacttgcaccaactcatttgcttcaatcaaacttgagaaagtaaattgtgcgacacct acagtacaattaatttaactgccgtaactattgtttgttgatttttcaaacattgaccaatgaaaagcaccgaattggtt gaaatgaaaaatgaaatattcgctccctttaagtaaactctcaaactgtctgtcttccttaaatacgaaccaatgatgaa tttaaaacgtctctccttttttctttcttattttcaggccaaggtcgttttatacagtattggtaagataagtttttttt tactaataagttacacttcgcacttgctttatttgaagagtttgactcaaacaaaacaatgagctggcactgattttttt tctgttgtttctacagctgatggttttattcgcacggtgtggttcgtgtaaagtgaaaaaggtattttcggatggcatat gtcaatttgataagaccggaataggaccttttatcgtcgagacttccacagcaaaagcaacaagccatacgaaaagaatg tgctgccgtattgttgactcacgttaatcattttaccgcggaatatttgttgttaccaacaaatttgttgtgggaaatcg gtctctgagaagggagcccgcctccttcgttttgtcaaggtttaaattaagtgcatgcggttctattcggagaatgttca cttgacttcgcaagatatgaatcttaatttcaaaatatgagcactaaactcaaagttgcttaccttttgtaaacaggccc ttggccgaagatgacagcatcttgatgaaactggttttagctgacatacctgtcaaaattgaaatgcggttagattaaaa agattttcagccgtgaaatgtgacgacagatgaaaacatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagtacttactaagat ctacgttatccggatagttttaaaccgtgcaaaaatatccctgcattagtaagcattggcgataggaaatcctattatct ggagatgcgcagaacgtatgcgaaataacaatagtaggcaccgtccttaaaagacaaagttgtggttttgacaggtcaat ggaaataaatttcattcaattcatttttctagttttcacatagacatagaagccgatagcgtttcgtgagtgccttcacg aaatattcaattctttatgcaagctcaagaacattaagacttgtgtatttatcttggatttatttatcgcaatgcctttc cgcaaggattgattctctttgcttaatgaataagcttccggcgaagcgtgattggccacggcgtttcaaacaaccacccg aataaactcgcatttgattggtctaattttatcatgatttattccatttgacgaaacaggtgaacttcgtgtatcaagaa agaaatttacaaacagcaaggcagtcgaagatcaaagattcgttaaaagcaattcaatggaagaatttaaagcaaaaact aaccgtttacggttcgaaattgatcaggctgaagtaagagaaaaagcagcgatcaagaatcttacattcgctcgacacga agccgaggaaaaggagaaagaagcagacgcgttgaagagaagaatacaactgctggaggataaattagacgccgtcgaag aacgcatttttgaaaaaaacaaattataccacgaagaactcgcgaggttagaaagagaggacagacagataaagattttg aatgaattcgaagaagaagatgagcggaaaatggaaaaactcgagtcgatgattaaagaatgcaaagagagggccgatta caacgaaaacaaatgcgccgagtgcagacggcgacttcagattatcactcgagagatcgaaaagtttggacagcgaaaga aaactgcgaaccacaaaattcgagaactggaagagcagaacaaatatgtcggtcgaaatttgcgcaaattggagatatcc gaagagaaaagatgcgatcgagaggacgcttacgataaacgaatgcgcgacttggaggaaatgaggagagatgaggaaat tcgatacgaggcggcggagaggaaaattgcaaaactgcaacatgaagcaagcgatgtgagaaaccaacttcaagaagaag aaaagaagatttacaacgttaaaaacatgttcaatgagactatgaatggtttggaccgtgtctgattttcatgcttgaga aggcttgctttcgaaaggtcaagattatcagtgttggttgaaaaaacaaagagtcgaataaggatttcctttcatctcgc attatttttaaagtaaaaaatggtgattattttattttaacgaaacctgttgaacgattcttgcccacccgccgtgcaga aaaggagaattcttctcgatgtttctctttggaaaacgcttgaataaatctaaaatcagcatcgaagaagaaatccttga ctgacaaataaggaaaataatataaatcgaagtggagacgagttgatttcgacggctaactcgtctatgagaactagcct ctctaagaaacttatttcacaact |
Protein
Protein ID | aug_v2a.00949.t1 |
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Definition | - |
>aug_v2a.00949.t1 MEEFKAKTNRLRFEIDQAEVREKAAIKNLTFARHEAEEKEKEADALKRRIQLLEDKLDAVEERIFEKNKLYHEELARLER EDRQIKILNEFEEEDERKMEKLESMIKECKERADYNENKCAECRRRLQIITREIEKFGQRKKTANHKIRELEEQNKYVGR NLRKLEISEEKRCDREDAYDKRMRDLEEMRRDEEIRYEAAERKIAKLQHEASDVRNQLQEEEKKIYNVKNMFNETMNGLD RV* |