Gene
Gene Model ID | aug_v2a.01267 |
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Locus | scaf496 : 73235 ... 77475 : - |
To GenomeBrowser | scaf496:73235..77475 |
Genes list of scaffold | scaf496 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-15 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC and NACHT domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.01267.t1 | gi|754353045|ref|XP_004342716.2| | hypothetical protein CAOG_08115 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
aug_v2a.01267.t1 | gi|754352068|ref|XP_004343590.2| | hypothetical protein CAOG_07716 [Capsaspora owczarzaki ATCC 30864] | 0.0 |
Transcript
Transcript ID | aug_v2a.01267.t1 |
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Definition | - |
>aug_v2a.01267.t1 caattgacatggttcttgatggcatctaatgtgttccttcctcaagaacatgatccaattcatggctccagcaaactcca agtcacctttttggcttctgagtgggggtccagtaaaggagggctctccaccttaaacagagagttggccgttcaattag ccaagttttcttgcgttgaagttacattctttttgcttaaatgctctgacgaggacaagaaatcagctgctagctatagt gtttccattcatgaggcagagatacgacctggttaccgtgatgaactggattggcttagctttccaccagagaatctgag gatagatgtggttgttggtcatggggtgaaacttggtcaccaggcccaagttatccgcaattctcacaaatgcaagtggg ttcaaattgtacacactgacccagaggaacttggaatgtttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnngattttgtggtcgccgttggcccgaaattgacccaagccttttgcgggtacttaagctcaattgaaaaagaagtttt tgagttcactcctggtgtttttgctgacttttctagatctagagttcaacaaactgctgtcaaaataaaacggtggagtg ttaaaagaaaacggtggagtgttttggtgcttggtcgtggagatgctgaagattttgagttaaaggggttcgacattgca gcaagatctgttgctgccttgtctgacactttcctctattttgtgggagcacctgacggaaaacatgaggagattgccaa gcggtttgttgattggggcattcctcgaaagcgtctcaaggtgagaggttacgtggacagccgagaagatctaaagcggt tattttgtgaggtggatcttgtactgatgccatcaaggacagaaggatttgggttgtcaggtctggagggtctgtcagct gggcttcctgtacttgttagcaaaaactccggttttggagaagctcttggcagcgtaccacgtgcctctttatttgtcat tgactctgaagatcccagcaagtggacagcaggcatcaaaagcatctggaaaagagacagaaagtcacaacttgatgagg ttaaagctgtgcgacattcgtatggtgaaagatacagttggtctgaacagtgcagacatcttatcgaaaacatgtttaaa cttgttgatggtatgaagtacatttagattttactagcttgttgattaaagtgataattttgaagaagtgtagcataaaa aatatgcattattatgaagtattgttttgattatgtggagaaaaaaatatctttcaaagttggatccatgttgtacagta attgaaagtcacaacttgatgaggttactgctgtgcgttgttcctgtggtgaaagttacagttggtctaagcagtgcaaa ctttttgatggtatgatctacatttaggttctactagcttgtggatgataatggtacttctgattgatcaacgatccatt gtttattgtacgggtaaaatcgcacctgtaattacggacaatcgcgcgtcgtataacgggtagctaatatttgatcactg cattagagcatgtataaattgatgtttttattccctgtttgttgcagagcgtgcttcgtgtccaagccacatcatagagg cgatacagcagatttacaagaagtgtgaaagcgtgatttttccacttccttggcgtgacgacttccatttccacatagag gacactttcatcagacttaagatagttgaaaatggaaaggaacgcggaaacgcgaccacaaaagaagtcactaacatgac aagtatcttcacaccacacgagtgctgcaaacaaccgcggactgtattgattgaaggtgaacctggtatgggaaagacca cctattgccaaaaactggtatttgattgggcaagcaaacaatgtcgcgtatgggatgagtcgtttccaagaattgacata ttcctgctgcttagatgtcgtggaatcaaatctaccatctgggacgctatcgaagatcaaattcttccagatgaaattaa cccgcaggataaaaagatatttttccaattcttgagagaaaatccctccaaggtgttgcttgtactcgatgggttagatg aggcagatccacaaaaactggatatgtacttgaaacttgttcaaagtaagcagcttttcggctgttacattgttctcaca tctcgccatgaagcgggggttaaagtgaggccgtacactgacacattgttagagattgtaggatttacagtaagtgatgc gaagtgttacattagaaagtattttcaacacgcggaacgcttagcagataaacttatttataacctccaaagagaggatt taatgcaacttgcacaaaaccctttaaacaccctcctgttctgtgttatcttcgaggatttagagggaattctaccaacc aacaagacgcagctttacgtggagattgttctctttattttaagacgttttgaagcaagaacggcttatcaagtagaggt aaagaccttttattagttttcaaaaaggaactgatgatcctaggaaaaactgcgctagattctctacgcaaacaagaact gtacttcgatgaccacaaaggggatatcaagaaaagtttgttgatgaagtttggctttctctcgatccagtctggtggta tcaagagagctccttgcgaacgttacgggttttttcataagagttttcaagaattcttctccggttacttccttgccttt tctattattgatgatgttgcttactctcactcagtattgacagatgagagatatatgggtgaactattttatgtttttaa attcatgagtggaatcgtagctctccaatccgaggtaactgcattgtcaattgtacaaaatattgcttcaattgtaaatg aaacaggcggcaaatctgataaattcgtttccaagttaggagttgctaataccttaattgacgaatgcaaaacttattta ggagacatttacacaaaattagtttcaacacttggcgagagtcttcagttggttgacgtggtagtaatgtggtcttcccg ccatctaaagcacagtaaatttatagagacgtttttccaggccctcacctttaactctaccgttaaaagccttaagatat cttatttaaagtttagtgctaggcttaccaacctgctcactcaggccctccgagttaacaaaactctttcttctttgcat ttgcgttctacctccattgatgcggagggagcaaattcacttgctgaggccctcacagtgaacacctctctttcctcttt ggatttgccttccaactccattggtgctgagggagcaaattcacttgctcaggccctcagagttaacacctctctttctt gtttgaacttgtttttcaattccattggtgacgagggagcaaattcacttgctgaggccctcaaagaaaacacctctctt tcttctttaaatttggactccaactgcatcggtgatgaaggagcaaattcactagctcaggccctaacagtaaacacccg tcttttgtctttaagactgagctacaattccattggtgataagggagcaaattcacttgctgaggccctcaaaatgaact cccgtctttcttacttggatttgaattccaactccattggtaatgagggagcaaatttacttgctcaggctctgagaata aacacctgtctttcttctttagatttgtattctaactccataagtgatgaaggagcaaattcacttgctagggccctcag agtaaacacctctctttcttatttgaatttgcattccaaccgcattggcactggaggagcaaattcactttctcaggccc tgagagaaaacacctgtcgttctcatttgaatttgtattgcaattctattggtcatgagtgagctaatgcacttgcctag gccctcagagaaaacacctcactttattctttggatttgagtatcattgtagtgacctaaatgcggacagataattgggt tctcagcttatgaattagtaattaacacgtgacttagcctatgttccttttaacattttcaaaaaaatgatttaaaatac c |
Protein
Protein ID | aug_v2a.01267.t1 |
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Definition | - |
>aug_v2a.01267.t1 MASNVFLPQEHDPIHGSSKLQVTFLASEWGSSKGGLSTLNRELAVQLAKFSCVEVTFFLLKCSDEDKKSAASYSVSIHEA EIRPGYRDELDWLSFPPENLRIDVVVGHGVKLGHQAQVIRNSHKCKSRVQQTAVKIKRWSVKRKRWSVLVLGRGDAEDFE LKGFDIAARSVAALSDTFLYFVGAPDGKHEEIAKRFVDWGIPRKRLKVRGYVDSREDLKRLFCEVDLVLMPSRTEGFGLS GLEGLSAGLPVLVSKNSGFGEALGSVPRASLFVIDSEDPSKWTAGIKSIWKRDRKSQLDEVKAVRHSYGERYSWSEQCRH LIENMFKLVDERASCPSHIIEAIQQIYKKCESVIFPLPWRDDFHFHIEDTFIRLKIVENGKERGNATTKEVTNMTSIFTP HECCKQPRTVLIEGEPGMGKTTYCQKLVFDWASKQCRVWDESFPRIDIFLLLRCRGIKSTIWDAIEDQILPDEINPQDKK IFFQFLRENPSKVLLVLDGLDEADPQKLDMYLKLVQSKQLFGCYIVLTSRHEAGVKVRPYTDTLLEIVGFTVSDAKCYIR KYFQHAERLADKLIYNLQREDLMQLAQNPLNTLLFCVIFEDLEGILPTNKTQLYVEIVLFILRRFEARTAYQVEALRVNK TLSSLHLRSTSIDAEGANSLAEALTVNTSLSSLDLPSNSIGAEGANSLAQALRVNTSLSCLNLFFNSIGDEGANSLAEAL KENTSLSSLNLDSNCIGDEGANSLAQALTVNTRLLSLRLSYNSIGDKGANSLAEALKMNSRLSYLDLNSNSIGNEGANLL AQALRINTCLSSLDLYSNSISDEGANSLARALRVNTSLSYLNLHSNRIGTGGANSLSQALRENTCRSHLNLYCNSIGHE* |