Gene
Gene Model ID | aug_v2a.02351 |
---|---|
Locus | scaf778 : 86986 ... 93368 : + |
To GenomeBrowser | scaf778:86986..93368 |
Genes list of scaffold | scaf778 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
e3 ubiquitin-protein ligase trim56-like isoform x1 | GO:0005622 GO:0046872 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.02351.t1 | gi|156384131|ref|XP_001633185.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.02351.t1 | gi|260807305|ref|XP_002598449.1| | hypothetical protein BRAFLDRAFT_83265 [Branchiostoma floridae] | 1.0e-14 |
aug_v2a.02351.t1 | gi|254939710|ref|NP_941034.2| | tripartite motif-containing protein 67 [Mus musculus] | 1.0e-13 |
aug_v2a.02351.t1 | gi|632982187|ref|XP_007907999.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM56-like isoform X2 [Callorhinchus milii] | 3.0e-13 |
aug_v2a.02351.t1 | gi|632982181|ref|XP_007907996.1| | PREDICTED: E3 ubiquitin-protein ligase TRIM56-like isoform X1 [Callorhinchus milii] | 3.0e-13 |
Transcript
Transcript ID | aug_v2a.02351.t1 |
---|---|
Definition | - |
>aug_v2a.02351.t1 ctaccaagcaacaaaggtgtacttagaattgtaaacaacgcagttgcaattgtgtaacacacacgcacattatagtattg cgatttaaactagctttgcagacacgaagtatgtatgagaaaaaagaaatgatgtgtcctttgtgttacagtcgctatgg aacaggatatccacagcgtatccctcgctatctggattgcagacatacattctgcacaggtgagaagaacacacatgctt tcctttttagaatacatattatgacagtgaaaagacggtcgttcctcaaaaagttataagaatttggtggatttttcttg taaaccagaggacgtttatgtagtggattaaaacaagagggctaatgatccactgtactggaatttcgaggagatgaata tttagctgcatgtcaaatgaaggtgtacaggttgatttaatttccttactctttacttagttctttacttgactgaaagg aaagcagtcgatgccttgcaccgtgttcccaaataacataaacgtaagagctaaccttgaaaagaatttcaggtgacgcc gaaatatagtgttaacagtattttccatggtgataaaggaactttgcgatcattaaatattaataacaataaagattgca tgcacagtatcacatttctctatatttgttgatctagggctcattaaaattgcgaaagtcgttcaagtagtagaccggac aaattaaattgctcttctttaaaagggtctccttttttcatcctttttttttttatccaagtcctatattattttttagg agactgacactggagtacttacggctgtgaacttgttctgtcaatgaaatggcaatattgtcctactctgcttgaacttt tttcttcttaagtttcccaaaaatttagtcctgttaaccttttattgagtttctccaattgactggattagaaaaaaaaa ttaaggaaatcattctgtttaaattgaaggcctatttaaaaactgccttgtttctgcagcgcagaaattcaaatcttgtc tgtcacttctgatttagcaatctgtttgagaatataattcgattctgccttaaaagtgtaattcttttatttgcagaatg ccttttgaaacttcaagatttgcaaggctcagtcatagaatgtccttgctgtaaactgcgaaccttgttgcctcccaatg gtgttgatggacttgaaaaaaacatggatcttttacaagctgttctgcgttcagaagaggaggagcaaaaattatgcaat ttctgtattcacaaagtttatccaccaaaacctgcaaccttcttctgtccgaattgtgatgtgttcatgtgtggcagttg ctcagatgagattcactcgcaactagagtttcgttgccatagtgtttgccgagcaagtgcagctaaagatgttacagaag acatggaacttgaaaaatggaagatatcttcacgtccattatccagcagttcatttttgagcaaacgttcttctggtttg aggccatcatcaagcaacagcagcagaccttctagttctttattaaattatgctgccatacctggtgagaagcagtttaa gccatttgtcagtttttataaccacactaataattaggtttaaaggttagactgcagcgtaggtttgattagctcttgca gaaaatatccagcactcataatccccactgcatcaacaagtgcctttcatttctattaaaatattgtcttgttgtgctac cacgttcccaaaacctgtatatagttcatttttggctttaatgtgagccacacactttccattactctcctattaataaa ggttccaggtgaatagagcttcatttatgtcccttgaaacatttcaatggctatctttgacttgtggtattggttttaag gactgaatttataacgaagtgtttttgtgcaacacctggttttgtattgactgttttattaactatcgtcttctttggta tctcatatttgacttttagaatgttctgttcacaaagagatgacaaaatactactgtcggaattgcagatgcctttgttg cgagtcttgttatcgttttggtaaccacaagaaccacaactgctttcaggtgcatgaagctgaggaacgtgaaaggaaag ctttggttagattacaaacgcaagtggagcaacatggtgaaaaattcatcaaggctcgtggagaagtgcagaaggctata gaagatgtaaataaaaacactatagctgtgaaagatatggcaaggagattttacagggaactacgtacagccattgatca agcagagaaactactgatggaagatattgaaaaaagaactggagcaaaattaaaagctttaaatgaacaacttaggtaag agattatttgaatggattattatctgttctatgaattttcagtatattgatcctcacagtttttactgctacaaggggtg cacggaattggcgcagtggtgagagctttcgccttccaccaatatggccccggtnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccagcatttg acttgatttgtgttaattgttaatttcagtttacagtgtccccaattagtgctccagctctagaacaactaggcactgaa ataaagttctttcctttccttttttttacttaagtagagccaagaaaggcctgaaaaattcaggcctaaacactagtcaa tccctgacattctgtgatgctagtgtagcactctaccatttgacggagctaacagaccaactgggagctagttcgtatgg agggcaatgataaccctgtagatgatggatgtatatccacgcaattatatgatcttaatactggtacatgaaattcatgt atttgaaatgcagactgaaatgaattttcagtgtatgattcttgaaggtttatttagcactacttaagtagtaacaagaa atgttcctctgaaattgggaaatcgtagacttaagatttttttttcaaatttggatcttgtcctcttttgtcctggtgtt caagacagcagttgtactgattccattattttccnnnnnnnnnnnnnnnnnnnnngtacatctttctgtagtcagatgat tgagatttcaagtctggcaaccactgcatgtagaaactgtgacaatgcccttagtatggattactttgaaatgctgctga tgaagaaggatgtggaaacagagatgatggatgccttggagttgctttgtgaaattaatcctacagcaaagggggattta ggatgtcaatttccaaatcatgaaaatcttctgggaagcatccgaacatgtgccaagcttgtcttacgtatgtaaaggat tcttcttatttttatcatgtataaagagttgtttttacttgtaaacattgcatagtatgtaagggtttgacgttgaaact ggagaagagatatgcaaggagctttacaattcctgaattttgcattcatttggcttcagaaaagtctttacattcttcgt ataagcttttatttttatgagtgtatgatccttgcagttataacttgctactcagttttgatagcttaaccggtggagca ctgctgcagcatcacagaggtcagggtttgagtcccattcaggcctaattctcactactacttaagtagctcagtaataa ctgttagaatcatacacttaaaattcacttcaatccactcttcaaatgcatgaatttcatgtattaacatcctgtagtaa gtgttataggtggcaggtttttaggtggcagggttggcctagtggtgagtgcacttgccttccaccaatgtggcccgggt nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnccaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagggccattatgaaa actactgggtgaccagtaatcaatgtctttaccctcgttaaataaagttattattattataggcttaatagattactatt aaggtcaaacgaaagcttgataaccaaatcatgacatcatcaacccttcaggtctcaagacttactttaatctctcacaa aactttttgcnnnnnnnnnnnnnnnnnnnnnncccctaacagcacctggaccccctgagaagctgatttgttggataaca gatgattacaaggtgcatgttaaatgggatccaccagaaaacaacttgtttttgtatccagttgtgggatacattttgca aagcagctctggtaaggttcagtgaagtactaaaataattattttaatttcaacacatttgcaaactctcatagaatcaa tatatttaacttggttcatggtaaacttgtgttcatcgagtgtaacagtaagctaagttctaggcatctttcaattggtt gctgcctatgatctcttggatggatcacatcactgttaactttttcacttctttattgtataaaacaaatagattccatg ttgccatgggtctgttcagtaatagaccacaggggatgtcaaaatgtgataagagcaaaaaagtggcacacgaggcgcag ccgagtgtgtcactgatgttcttaccacattttgacgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnntggaaaaaatgcccttttatttcaaatttcgccactttgacagacacggaaatagcactgacgtgatcttatgt ctataaaaaatgaagcaaactgattggttgctatgcttagcaaagaaattgaaattgagcgctgtcaccatctgtgcctc tgtcctctaatagatcataggcgagaaccaattagagtgctagaattacttgggttattacataaaaaacaaatagattc catgttgccgtgggtctgttcagtaatagaccacaggagatgtcaaaatgtggtaagaacatcactgatacactcaccta actgcttgtgagccatttttttgttcttaccacattttgttgtcttctgtgatcaattactgaacagacacatggcaaca tcgaatctatttgttaaatggtgctcctggagattttcaagcaatggacaagggtaagagtctctagctttgtgagtgct tagcaacttcctaagtgcattcataactcaacagatgtacactaaccatggacaaattgtttttgctgtaacatttatat tattttatcaaattttggtttctccaaagttacaatttgctttgtcagtatctcattatattgacattgcttttttttcc aggcccagataacagttttgtagatatttacaaaggaagtgaaacttcgttgataattgataagagtgctgccgagttac cggtcggaaaacaagtacagttccgcgcatgtgcaattaatctcataggggtcggaccctggggatttccatacggtcta aaagtaccagtgtgataaattactggacaagcttagtgactcgggtttttacaaggagcaagccaattcttagccttctc ttcaatctctctgcattctctgtgacgtcaaatgaccacaacccgagcataggacaaatgaagaaagattgtcacctaac aaaaagtttttgaagtaataacgcaaaaaggcattggctgtcatatttgttttcggattggtcttgcctcttgtcctcgc cgtcttttgctaatttactgttttgaatgaactacttctctgagaaagaaaataataaccctttttacaataattattac agaccttctagttatcagtcttcttcaggcaggagcctataggtcataggctcctgcttcaggctattgacagtcttgtc caaatatctaaacccatacttggcatagactactcacccccaacaccagcccctcaaaacgtcaattactgttaggtgaa gccttgattcacttgagctgagaggagaggttcatgcaagtgtgagagcgttgtcaagttagctcgattgatcagaaaac gattttcttttctttttttctgtcgttatctagacctgcggcccgtttctcaaaagtcctgaa |
Protein
Protein ID | aug_v2a.02351.t1 |
---|---|
Definition | - |
>aug_v2a.02351.t1 MYEKKEMMCPLCYSRYGTGYPQRIPRYLDCRHTFCTECLLKLQDLQGSVIECPCCKLRTLLPPNGVDGLEKNMDLLQAVL RSEEEEQKLCNFCIHKVYPPKPATFFCPNCDVFMCGSCSDEIHSQLEFRCHSVCRASAAKDVTEDMELEKWKISSRPLSS SSFLSKRSSGLRPSSSNSSRPSSSLLNYAAIPECSVHKEMTKYYCRNCRCLCCESCYRFGNHKNHNCFQVHEAEERERKA LVRLQTQVEQHGEKFIKARGEVQKAIEDVNKNTIAVKDMARRFYRELRTAIDQAEKLLMEDIEKRTGAKLKALNEQLSQM IEISSLATTACRNCDNALSMDYFEMLLMKKDVETEMMDALELLCEINPTAKGDLGCQFPNHENLLGSIRTCAKLVLPPGP PEKLICWITDDYKVHVKWDPPENNLFLYPVVGYILQSSSGPDNSFVDIYKGSETSLIIDKSAAELPVGKQVQFRACAINL IGVGPWGFPYGLKVPV* |