Gene
Gene Model ID | aug_v2a.02353 |
---|---|
Locus | scaf778 : 106368 ... 112055 : - |
To GenomeBrowser | scaf778:106368..112055 |
Genes list of scaffold | scaf778 |
Manual annotation
Study field | Flagellum |
---|---|
Gene name | Adi-RSP3 |
Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Chlamydomonas RSP3 (XP_001695406). This protein has a AKAP domain. This protein is a component of radial spoke and/or central pair. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.02353.t1 | gi|156384017|ref|XP_001633128.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.02353.t1 | gi|72009354|ref|XP_783727.1| | PREDICTED: radial spoke head protein 3 homolog isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
aug_v2a.02353.t1 | gi|676484958|ref|XP_009063506.1| | hypothetical protein LOTGIDRAFT_130261 [Lottia gigantea] | 0.0 |
aug_v2a.02353.t1 | gi|291241375|ref|XP_002740588.1| | PREDICTED: radial spoke head protein 3 homolog [Saccoglossus kowalevskii] | 0.0 |
aug_v2a.02353.t1 | gi|74096277|ref|NP_001027624.1| | radial spoke 3 protein [Ciona intestinalis] | 0.0 |
Transcript
Transcript ID | aug_v2a.02353.t1 |
---|---|
Definition | - |
>aug_v2a.02353.t1 ccgttaaaatcggcattgtaaatctcgtaagatcacagcctagataaaacgtcctgttcatcgaatatggcaacagttct cgcccaaaaaggtgatggaacaagaacgtacactttcgcaagccaacctcgacctgttcaacagagaaaaaaatttcgcg atcctctcacaaaagagtaagtaatacagcggcatacgggttatggctgtataatgaaattcttcacttcctttgtgtac acatgaagttcagttctcaatgtatcgtaaactagctagtatttgaacacacaataagaaaccatgccaacctgatcttg tgtatgcaaaaaaaagttaaagttttcatttcttttcattttcctcatgtttataaccactttcgtgtaatgcgttgatc cgattttgcgattgatgaatgggttttcttggaatatcaatagaaagagcaatgttcttagctataataaaaaataatca ttgccagatttaagagcactaacgtcaattattatgacaattaaagttaaagttctatagtctgcatgcagacgtcaatt tcctcaattgctatagcataatgaaaaggttcactttgtatgttagctacgaaagagatagagacatggcatttccaaaa gtgcagcagtcactaaaaggttttaaaaccattataggggtgcgtttaggttaattcaaatttctgtgcatcaatccaac taagagacatacatgtctgcaaatttgtgtgcactacattattatatttatctaatattgaataacggtttatttgacag tgacaaaaaatagaaaataatacataggcatgcagcgatttctcctcaagtgttcaacttgatttctcaagagtgggcac agcaaacctgtgagacatcaagttgaacacaagaagagaatttcatatctccaagcaaccatgtataattttgtttatca tataaacaccttacgaacaagaagaagccgactcaattcacattattaaaagaaaatgttttgcttttcattcatggcac taaatagaacaagtgacgtattggcagctggttgactatctcaaacacacgtgaaaaattaccgtaaattttcatgtgtg atgatacagtctttctcagtggcagaaatctgtataaagcactccattttatgtaataaaacaaaataatcttgattttg attcttcgcaatttgcataaaggtagtattctgcagtgaagggacatatttagtgtgttgattctcagtaaagaaccaaa atggaaggcatgtacatgtgagcgaggaaatatttcttttcaatgacagctgtaatattgagaataggcaaggcttattg aagttccttaactcttaacacgttttttactaaataatggaccatttgcagctgagcgatcatgtggtacaaaatcgcca tactggacatcaaataatgcactgggacatgttgaacaaagaaaattaagatttggtggttttctttaacatgtcccagt gtgtcattattttgctctctagtatggcgattttgtaccacatgattactcagctgcaaaaggcccgttactcttgcatc aggctgaacaacagctctaacaactcatttaccactacagctactataccttacatatgagggacctccaagacccagta tgcatcctacaacatctaagttgcgcacaaacccatgacacttactcacaaagacgaaccagaagacaggccaggagcgg tctataagattaaatgctccaactgccaggccacttatgttggtaaaactggcagagactttatgacgtgactaaatgag cacaagcaagctgctaaaaagggtgacctcaacaacaacatcgccgaacaccgcttaaaaacaagccacactatcaactg gggctctgctacattacctgtagtattgactactatcaacgaattacactcaaaagcctgtttactaacttagaatgaac tgccctaaattgtcgtcaacatcttcctgtgccttgcaaacgattactccacaggaaacagtaacactttgtttgtcatt gcaacccctctatttacataacctatcactacacatgtcttaacagccaattgcgatcaattgcaatcaaattgctcatg gggttattttaattttcaactgactaaaaatgatcccctgactctaaagatggcttccccacaggttgtggaaatgtcga tcgcaaacattacagcccagttctcaggactccagtcacccaggtgatcattttcaagcaaggtatctttttgactggtc accacacacaagttcctcaaagcatgttttctttttttttttagaagtgagagtcctacaccatatggaaacatcatgta cgatcgaagaattgtcaggggcaatacctatgcacaaaggaccttacctgcggtaagttaaccagtctaaatgcagtagc attagtattctcatgataaaggtataaaacagaatggtattcttggtattagtatcagtcctttgagtggtattcaaatg actgtcaaaaaactaataattatttactaaagtaactgctgtaaccaatcacaacagcctgaaacaaacagcatgatgaa ccaataagaattcctagcagtttcctttagcttgctcaaggcgaaaatcgcacgtccaagatgtgattagttctggacgt gcttctcattggttgaagaactggcacaaaatctttttgccaatgcagtggttgcaatcacataattaccttcgacaatc atttgaaaactgctctgttgtgcaatgaacaggtaaagcattgcactgggacaaaaataaatttttttgtcaaagtttgg tttcatcagattctcagagatctgacaatgggtgtctctttcatttcatttctgcagacagcacaacctgatccaattga aattcagagacagcaagaggcaagaaggagagcaattgccagaaaacgtgccaaggcacagttgaaaccaagatcacctg agcctgttgaaggaaggaaacacattgatgtacagacagaactatatctggaagagttaagcgatcgtgtggaggaagct gatgttcagacacaaacagatgcatttcttgatagacctccatctcccttgtttattcctgcaaagagtggagttgatgt tgcaacgcaaatattagagggagaagtaagtttttattataattttaggaacatcatcattgtctttgcaacaaccctga cattggttcacaaaatgataaacatatgttccaacagagacaatagggagcttaagcaaccacgacaacgacggcaacaa aaaccccagaaatttgcatatttgatgatgaaaaacagtatttttgcacgtgcatttttcattttttgacaatattttgt agacgttctcgttctttctacgatgtcaaatgaccagttttgcagttcagtggacaacgtgagcgcatgatgacaaatgt tcaattttgtcttcttatgtcccaagcacaggttccaacttaattccaggatagttagaacacattttcaagcataatga gtttgaataattgaaaaatgattgcagaaaggcaaagttacattttcagatgacgttctcgctttcattgacgtcgtgtt tgcttaagctcccttatattaataatggcccctgttatcaaaaagttaacataatcaacaatgtaaagacctgcttcata tctggcggatttctttaacattatggtacgtgtttgggacaaattttattcccttatcatttaattactttaccggattt agtacttaaacacacttttcaggtattgttgctatcactaagtacaacagaatgtttttattgacttaagttctttataa tattgttagttttaaccctttttttttgcagttgtttgactttgacattgaagtgaaacctatcctagaagtccttgttg gaaaaacagttgaacaagctttactggaagttatggaagaggaggaacttgcaaatcttcgtgcccagcaaagacaattc aaagaacttcgaaatgctgaacttgttgaaactcagaggttagaagaacaggagagaaggcacagggaggaaaaagaacg acgaatgagacaacaggcagatgtgctaaggaaagaaagggaaactggagaaaagatatctgcacgagctttcgcacagg taataataatgagactcccctttggtggctttgtgtttagtaccttcaaaaagggagtcacaacattttcatattattat tattaatgttaatgtttatggtctttgaagttttgctatgcaagttaagctgtagcaaaagaaaggcctcagtgggactt gaaccctgacctctgtaatgctggtgcagtgctccaccagttcagctatcaggccaactgggagctggtcatcatgtgaa tccatgagaagcccgtagagagtggatgcatgagatcaaatttataaagaaatttcatttgaaatttcatttttttaatt aaaggggatatattatgattgctattattttaagtagcatttgatatgaaagtaagtcttctttccttgttcattctcag agctaccttgccgaccttgtaccatcagtctttggttcattaaatgaacacggttacttctatgatcccatagaaagagg tgagatgtgtccctgtacaattttcctctgcagtattaataataatttgtacagtcattcttctaatgttctcttgacca aggtatttaaaaaaaattgaaaaatggaacttttcatgacttttgtttcatttttagatgtggaaacctactttatgcct tggctgttagaaaaagtggagggtgaattgaatagaagcatggtttccagaacagtccttgatggtaagaagtgttttaa ctattgctttgcacaagcattatactgggtactagttcagtgaactcatcagagcaatgggtggtcaagcagataatgct acccacttgagccatttgtatgagttgtcaacttttttggtccaatgatgttattgagaagttatgaatatcaaagataa caaattccaaacttacagttatcatctattccttaacttaacagctataataagagatgttgttcggaagcgctttgaag tctacaacaaactcgaggaagccactaggcttgctttggagcaagaggcagcagccaaagcagctgaggagagaaagaaa gctgaagagatggcggcaaaagctgatgagcaagcaacaaccaaggaaaaggaggctgagggtgatgatggtggtagtga acgtgctaccactgccgacacacctgctgaatcaggacagaatgaggatggagaagaagaataacttactgaaacaaact attaatttgaaatattattattttgtgcatcattctcattactttaaagaagaggaaaaaaacacaatgttcttagaaca agatcagaagttggatcaattttcatattttactctggctatgagaaagttaaaaaaatgttcagctactttcacaattt ccagccaatacatggacttttgtgatgactctttccaagatgtatataaagcctctgagatggcatgtaataaagtggca agctttca |
Protein
Protein ID | aug_v2a.02353.t1 |
---|---|
Definition | - |
>aug_v2a.02353.t1 MATVLAQKGDGTRTYTFASQPRPVQQRKKFRDPLTKESESPTPYGNIMYDRRIVRGNTYAQRTLPATAQPDPIEIQRQQE ARRRAIARKRAKAQLKPRSPEPVEGRKHIDVQTELYLEELSDRVEEADVQTQTDAFLDRPPSPLFIPAKSGVDVATQILE GELFDFDIEVKPILEVLVGKTVEQALLEVMEEEELANLRAQQRQFKELRNAELVETQRLEEQERRHREEKERRMRQQADV LRKERETGEKISARAFAQSYLADLVPSVFGSLNEHGYFYDPIERDVETYFMPWLLEKVEGELNRSMVSRTVLDAIIRDVV RKRFEVYNKLEEATRLALEQEAAAKAAEERKKAEEMAAKADEQATTKEKEAEGDDGGSERATTADTPAESGQNEDGEEE* |