Gene
| Gene Model ID | aug_v2a.02624 |
|---|---|
| Locus | scaf864 : 58704 ... 61245 : - |
| To GenomeBrowser | scaf864:58704..61245 |
| Genes list of scaffold | scaf864 |
Manual annotation
| Study field | Transcription Factor |
|---|---|
| Gene name | Adi-myc3 |
| Description | Named thus based on a BLASTP search against NCBI. There is a Myc_N domain in this gene model, but leucin zipper motif seems to be missing. Myc_N domain and HLH domain seem to be partially overlapped. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transcriptional regulator myc-like | GO:0003677 GO:0003700 GO:0005634 GO:0006355 GO:0046983 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02624.t1 | gi|156368274|ref|XP_001627620.1| | predicted protein [Nematostella vectensis] | 5.0e-25 |
| aug_v2a.02624.t1 | gi|52001462|sp|P52160.2|MYCA_DANRE | Transcriptional regulator Myc-A | 3.0e-19 |
| aug_v2a.02624.t1 | gi|153946419|ref|NP_571487.2| | transcriptional regulator Myc-A [Danio rerio] | 4.0e-19 |
Transcript
| Transcript ID | aug_v2a.02624.t1 |
|---|---|
| Definition | - |
>aug_v2a.02624.t1 gtttgcttccaacagacgcagaaattcgggcaaggtagcgtaggaatacctccagaggaagccttcactccctttaactg ctaaactgcagtcgcccagaatttcataaggtaaaacagcgtagaaatcttctcgaggcggctttaactttttaggttcg ttcggacgtgaagttcattcattctcacttcatccgcattttctgcaagaatgtaatcatagacttatatgcagaacggg agtcaagagacaagtaaaaatatgactttagtagtgatcatttttcgcaaagatatgcgcaaaattgttgactcctggga aatcggttttagtcgggagctatgaacttttgtagttgtagagcttcccgggctatatcagccacnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnncagaatggctgttcagaatggctgttccttttgtaagccgtttgcgtctgaaaacggcc cggacgccacgtattacttccatctggaaaaagacgaagtggaaactgaagcatatagtatatcaacagtcccaactcat gacatttggaagaagtttgaacttcttccaacaccgccgcggtctccatcgcgatcaccgcgaagttctccggtcgactt tgcggacactttgcaaagtgtgtcagataatttggacaactgctcagttgcacccttaacaacggttgaaaattctctca gttgtttaaagtccaagctcattcaagactgtatgtggaatgcttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnngcaacttcagatgaggacggcgaaataaacaaaagagcaactcataatgttctagaacg gaaacgaaggaatgatctcaagactagcttccatgttctgcgagaagaagtccccgaactcaaggacaacgaacgagctg caaaagtcacaatcttgcggaaagcaaaggagtgcgtagataaacttaaaaacgacgaaacaagatttcttgaagagctt acgaaagagcgacggagaaacgaagagctcttagatcgtctgcatacccttagacaattgaagcgaaagtaactttagtt gactttgccaagactctgtttctcgtttgcgacaggcttcagttagaattttgtacatagatatgtttaaaaaccagtac gatttgtttcaggggtcagattactagagaatccagtgcagtataagcctttgtgtgatcttgctcgcccttccgttgtt taaaagtcattcattcaaactcaaggcgacgaattttttgtctgaacgccaaataattattccctatcgcaaaacagtaa gtaaaagcatgggcatttcgtttgaaagtgatgctttactgtagagtattagtttttcttgacaaaagtagtttttgact gcgatagttaaaataaatgggtatatatttgcatatattgtatcaatgcgcgggaaattcgggttgatttttccataaat taacgtcatgattgtagattttgtgtgacacatctggaattatatcggaagaaggggtgtttacgatcttatgctcattg agggtttaaaagagttagaggatacccatttttactgtgtaaaacactggttggccggtttcggccctggctgatatttg gaaagttatgtttagaaatttgatacgcaccgttttgaaactagtatgtgatattgcagagtattgtttgtacttatagt gaagccttttgcaatagacgtttttggccacttagcttgtgattattattattatccattagaaaggtttgaggtgtgat tttataatccacagttgaagagcgctgaatatttctgttacatttatatttggaaagttaactcgctttagatacgtgag aagtattatataaacaatgcttcgctttgcaagcaaacaaatattaaaagcttacaggttca |
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Protein
| Protein ID | aug_v2a.02624.t1 |
|---|---|
| Definition | - |
>aug_v2a.02624.t1 MAVQNGCSFCKPFASENGPDATYYFHLEKDEVETEAYSISTVPTHDIWKKFELLPTPPRSPSRSPRSSPVDFADTLQSVS DNLDNCSVAPLTTVENSLSCLKSKLIQDYEDGEINKRATHNVLERKRRNDLKTSFHVLREEVPELKDNERAAKVTILRKA KECVDKLKNDETRFLEELTKERRRNEELLDRLHTLRQLKRK* |
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