Gene
Gene Model ID | aug_v2a.02718 |
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Locus | scaf905 : 2168 ... 7252 : + |
To GenomeBrowser | scaf905:2168..7252 |
Genes list of scaffold | scaf905 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 4-1 |
Description | This gene model contains DUF1759 domain, RVP domain, RVT_1 domain, Peptidase_A17 domain and rve domain. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02718.t1 |
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Definition | - |
>aug_v2a.02718.t1 cggtaaagttgaagattggctacccttctggggaaaattcaagtccgaaatagattcctcaaacctggcaacgcttacta aattcgggtacttgaaggagctcctcgaaaagcacgtgaggaacgacatcgagggattgcctttcacagatgacggttac gacaacgcaaaagcaattctcgaagcggaatatgggcagcctgcagatatcgtaaatgcgtatgtgaagaacataatgga actgccagttattactggagtaaatccgaggaaagtgaaggaattctacaagcaacttcgccacaacgtgcaaagcttgg acacgcttgagcggctcggggatgttaaaggaaacgtgcgttctactttggacaaattgaaaggggtgaaagctgatcta gtgcgtggaaatgaaggttggagagactgggatttcaaagatcttttgagagaacttaaaaaatggacagacatcaatcc tgtcgaggagagcgtggcagaaaggatcccggttaaatcaaatccaaagcaaacaatgcccacgcgtgtattcaaaaccc attcacagctagaaacacgaaccggaaaccagcaatgtgtttactgcgaagatcaaaatcatcgatcagtcaactgcaca aaggtcaccgagacgggggagaggcgtagaatactttcggagaaaaggctgtgctataactgcaccggcgggaagcatcg cgcggatgattgtaaaagcagattacgatgccagaaatgtagccgcaagcatcacacctccatttgtagcacccgcgaaa atgacttcaatcctctcctgatcgcagctggaatgccgaacgcgcgcgtgacatatcctgttgtagttgtggaggtcgag ggtgtgaaatgtcgagcattgttggacacgggcgcgggaagttcgtacgcatctgcagcactgttaaatcgaatttccac gagaaaacgtaccaaagaagtcaggaaaatcgagatgctgttaggaacgtcaaccagagaagtggaactggttacaatcg agattggtgacgttaaccgaaaattcgcaatgcctgtagaagtcacgaaagttgacaaaggggaactacttttccttgac aatccgaattacgaggaaactattgccaagaacccacacttgtcaggagtggttatgaatgatcgagataagaagagtca tcttccagtgcatcttattcttggtgccggagagtatgcaaaattaaaaaccgagagtgcaccgaaaatcggggaacctg gtgagcctgtcgccgagctaacgaaattcggttggatcatcatgtcaccgggcaaagaacctctggacataacaaacatg ttattgacgcagacatcacacgtggattacgaggaactttgccgtctagatgtgctcggcctgtcagacacgcccacgaa cgaccagagaaacgtgtacgccgaattccaagagcagctcactcgagatgaggaaggttggtacgagactggtctgccct ggcgcggaaatcatccagtgttaccgaacaacagagagggaagtttgacacgacttgcaagtttaaacagaaaactcaag cgtcagaaccttacatctgcatatgaagagatcattgaagaacaaagggaagcaggcatggtggagaaagcagacgggcc ttgtgttggtgatcgggaattctacataccacacaagccggttgtacgagctacagcagagtcaacaaaattacgaatag tctacgatgcatctgcgagggctttcgatggtgctccttcgctgaatgattgtttgcatgcaggtccgccccttcaaaac aaactttggagcgttctcgtcagagggcgtttcaaccccgtggcggtttctggcgatctccagaaagcattccttcaagt gagaattaaagaggctgaccgtgatgcaatgcgtttccactggcgtcgagacgaacattcacctttaacgactctgcgat tcaccagggcgctttttggattcacttcctctccttttcttcttgggagagttatcgaagcacaccttagcaactgggag gagaaagagccagaagtagtggaaaaaatacgcaaagagctgtacgttgatgatttaatttcgggatcaatcactgtgcg caaggccagagaagtgaaagacaaggcaacggttgtcttccgagatgcatgttttacactgcacaaatggcactccaatg cgcctgaactagaagcagatcagtcttcagccgaagatgcagaagaagtaacctatgccaagcaacagttgggcgcccca cgaggaaacatgtcaagaatactcggtctctcttggaacaagaaacgagacacagttagcgtagaagtcccatctgagca agcgaggttgacaaaacgaggtatcctagccaaactagcaaaaatttatgatcccctgggactcatctcaccagaaacac ttcgtggcaagctcatttatcgcgccgtttgcgattcgaagagagcttgggatgccgaactatcacgtgacatggcgaag gcatgggtaaaatgggagagcggcttggcacaaagctttgaagtaccgcgatcgcttgccgttcatcgagaggagattga ggggattgagctacattccttcggagatgccagcgcaaatggagttgcagcctgcgtttatgctgtcgttcgtcaggctg gcgggaccaatcaaggcctgattgctgcgaggtcaagactttccaaacaagggctgaccatcccgcggctcgagctcgtg gccggccatatggccgtgaacctgatcatcaacgtgagagaagctctggaaggattacccttgacaagcatgcactgttg gctggacagctcggttgctttatattggataagggggcgaggagaacacaagcagttcgtgtcaaatcgtgtcgagaaga taaacactcaccatggaattacgtggcgttatgtccctaccgcagagaacccagccgatctcggaagtcgcggaggccgc ctggaggaggcaaatcagtggtggaatgggcccaggtggctcccaaatcgagagaactggccggcggatatcctggacga accgaatgaagagagccaggccgaggctaagttagttcggaaagtgctggcagtggcagttgacgaagaagatgaggtgg agggcgtattacgcaaattttatttgcggaaagccgtacgtgtgtgtgcgtggatgcgaagattcgcacacaacgctctc cgcagtaaaggtgaaacgcgtatcgagggaccgctgacaacccaagaaacaaatcaagtgagacttcattgggacaggca ggctcagaagagtggtgaagttgaaaaggatcgagtggtgttgaacttgcagttaaatcaggaaggcttactagagtgtc ggggccgactgcaaggagaatacccagtatatttaccacacaccagtctatattcccagcgaatcgtggaagaagcccac ctgcaaactttgcatgggggagtggggctaacgatgaccaaagtccgaagccgatactggatccctaagctaaggaagct ggtgaagaaggttcgccgaaattgtcacggatgcaaaagatttcaagcgatggcatacgccgctccaccacctggacgcc ttccaatcacccgtaccgaaggcgttaacccgtttcaagtgattggggtcgactacgtgggtccactgcgatatcgcatt tcaagacaacgagaaggaaaggcctatgttctgttatatgcctgcagtcttacaaggggggtctacctggatctgttgcc tagtttggaaaccgaagaatgcctgacgagtctgaagaggttcatcggaaggcgagggagaccggaacgaatttattccg acaatgggagaacgtttattggtgctgcaaagtgggtcaaggcagtgatgaaagacgagcgactccacaattatttgtca gtcaaccagatcaagtggcagttcaaccttagccgcgccccatggtggggcggtcagttcgagagaatcattggtataat gaaatcagccctacacaagtcaataggacatggaatgttgagttggaaggaattacaagaggttttattagacgtggaga tcaccctcaataaccgaccgttgagttatctggaggatgatcctcagttacctgttctgactccgagttccatgctgttc gtgaatagcaatgtgctgccagagttacaacctcatcatgttgaaacggctgatctccgcaaacgagtcaagcacttgct taagtgcaaggaggcggtgtggcgacgttggtcaaaagagtacctgcgcagccttcgagagaaacatcgtggccaagcaa ccgctcagggaaacgcacctgccatcggtgacgtagttatagtacgagcggaagaaaggaacaggggcaaatggccgctg ggtatagttgaaaatgtcatagttggtactgatggaatagtcagaggagccgtattgcgctctgggaagtcccgtattga acgagcagtccaacacttgtatcccttagagctctcgtgtgatagaccgcgaccacacccagcggagttgaatccacaag ctcaaccattccgaccaagaagagatgcggccgttgcagctcgcctgcgagtacagaacattgctagagatgaactgcga tctgaagttgataactgaactttcatctaattttgagaactgtcaggagtttcatttctcatatgtgattctagtgttca attagattttcgagacatatctctccttcggagatatatggggggagtgtgtcgtgattttgtacaatgtcgttacgaaa taagagaatgtgttctaaagattgacatttttcaaggcgtgtcgcctacatgtatcttttatcaaacattacaacgaaaa taggttaatgttacacacgagaaagaaatcaatcgagataaaagggtaaagcgaactgatctcaagtgaaaataattagt aagaaagagaggttttgtcgatccaattaaatcagtttacgacag |
Protein
Protein ID | aug_v2a.02718.t1 |
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Definition | - |
>aug_v2a.02718.t1 GKVEDWLPFWGKFKSEIDSSNLATLTKFGYLKELLEKHVRNDIEGLPFTDDGYDNAKAILEAEYGQPADIVNAYVKNIME LPVITGVNPRKVKEFYKQLRHNVQSLDTLERLGDVKGNVRSTLDKLKGVKADLVRGNEGWRDWDFKDLLRELKKWTDINP VEESVAERIPVKSNPKQTMPTRVFKTHSQLETRTGNQQCVYCEDQNHRSVNCTKVTETGERRRILSEKRLCYNCTGGKHR ADDCKSRLRCQKCSRKHHTSICSTRENDFNPLLIAAGMPNARVTYPVVVVEVEGVKCRALLDTGAGSSYASAALLNRIST RKRTKEVRKIEMLLGTSTREVELVTIEIGDVNRKFAMPVEVTKVDKGELLFLDNPNYEETIAKNPHLSGVVMNDRDKKSH LPVHLILGAGEYAKLKTESAPKIGEPGEPVAELTKFGWIIMSPGKEPLDITNMLLTQTSHVDYEELCRLDVLGLSDTPTN DQRNVYAEFQEQLTRDEEGWYETGLPWRGNHPVLPNNREGSLTRLASLNRKLKRQNLTSAYEEIIEEQREAGMVEKADGP CVGDREFYIPHKPVVRATAESTKLRIVYDASARAFDGAPSLNDCLHAGPPLQNKLWSVLVRGRFNPVAVSGDLQKAFLQV RIKEADRDAMRFHWRRDEHSPLTTLRFTRALFGFTSSPFLLGRVIEAHLSNWEEKEPEVVEKIRKELYVDDLISGSITVR KAREVKDKATVVFRDACFTLHKWHSNAPELEADQSSAEDAEEVTYAKQQLGAPRGNMSRILGLSWNKKRDTVSVEVPSEQ ARLTKRGILAKLAKIYDPLGLISPETLRGKLIYRAVCDSKRAWDAELSRDMAKAWVKWESGLAQSFEVPRSLAVHREEIE GIELHSFGDASANGVAACVYAVVRQAGGTNQGLIAARSRLSKQGLTIPRLELVAGHMAVNLIINVREALEGLPLTSMHCW LDSSVALYWIRGRGEHKQFVSNRVEKINTHHGITWRYVPTAENPADLGSRGGRLEEANQWWNGPRWLPNRENWPADILDE PNEESQAEAKLVRKVLAVAVDEEDEVEGVLRKFYLRKAVRVCAWMRRFAHNALRSKGETRIEGPLTTQETNQVRLHWDRQ AQKSGEVEKDRVVLNLQLNQEGLLECRGRLQGEYPVYLPHTSLYSQRIVEEAHLQTLHGGVGLTMTKVRSRYWIPKLRKL VKKVRRNCHGCKRFQAMAYAAPPPGRLPITRTEGVNPFQVIGVDYVGPLRYRISRQREGKAYVLLYACSLTRGVYLDLLP SLETEECLTSLKRFIGRRGRPERIYSDNGRTFIGAAKWVKAVMKDERLHNYLSVNQIKWQFNLSRAPWWGGQFERIIGIM KSALHKSIGHGMLSWKELQEVLLDVEITLNNRPLSYLEDDPQLPVLTPSSMLFVNSNVLPELQPHHVETADLRKRVKHLL KCKEAVWRRWSKEYLRSLREKHRGQATAQGNAPAIGDVVIVRAEERNRGKWPLGIVENVIVGTDGIVRGAVLRSGKSRIE RAVQHLYPLELSCDRPRPHPAELNPQAQPFRPRRDAAVAARLRVQNIARDELRSEVDN* |