Gene
Gene Model ID | aug_v2a.02784 |
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Locus | scaf938 : 14006 ... 20408 : + |
To GenomeBrowser | scaf938:14006..20408 |
Genes list of scaffold | scaf938 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 39-25 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 39-1. This gene model contains Glycos_transf_1, NB-ARC and NACHT domains. |
mRNA evidence |
Transcript
Transcript ID | aug_v2a.02784.t1 |
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Definition | - |
>aug_v2a.02784.t1 cacaatgattggatatgctcttccagattgacgtggttcttgatggcatctaatgtgagccggcttcaagggcatgacac aagtcatggctccaacaaagtccaagtcaccattttggcttctgagtggggatccagtaaaggaggactttctaccataa acagagagttggccattcaattagccaagttttcttgtttggaagtcaccttctttttgcccaaatgctctgaggaggac aagaaagcagctggtagccatggcatttccattgttgaggcagccagacgatctggttacagtgaactggattggctcag ttttccaccagggcatttgaaaatagatgtggttgttggtcatggagtgaaacttggtcgccaagcccaagtcatccgtg agtctcacaactgcaagtgggttcaagttgtacacactgacccagaggaactaggaatgttcaaacgttatgagaatcca atctcaacaggacaagaaaagcatcatgtcgaggtagagctatgccagatggctgattttgtagtaggagttggacccaa gctgactgaagcctttcgcaagtaccttggctcttgtaaaaagcaccaagatgtttttgagtttactcctggtgtttttg atgagttttctggtgttcagcaagttcctgacgaaagaaaacagtgcagtgttttggtgtttggtcgtggagatgctgaa gattttaagctgaagggatttgacattgcagcaaaagctgttgctgctttgtctgatgctattcttgttttcgttggatc accccatggaaaacaagaggagattgtcaagcaattcactgattttgggattcctgcaaaccgccttagggtgagaagtt acatggagcgggaagctctgaaggagttattttatgaggtggatgttgtgctgatgccgtcaaggacagaaggctttggc ttagcaggcctagaagctctgtcagctgggcttccagtacttgttagcagaaactctggttttggagaagctcttggcag cgtaccatgtggctctttatttgtcattggccatgaagatcccagtacatgggtggcagccatcgaacgcatctggaaca aagacagaaagtcacgacttgatgaggttaacactgtgcgagatatctatgctaaaagatacagttggtctgaacagtgt gagcatcttatccaaaagatggttgaacttgttgatggtatgaactacatttaaactctaccagcttgttgttgaaactg ttaatttgaagacacatgtagccaaaaacaaaatgcatcatcccggagtagtgtttgatcatgtggaaaaaaatattccg tcgaggttggatcattgttgtgcaataattgtgcacatgtggtttattgcagtgtttgtaaggctgtggatgggacacat tttataaggaatttgataagcagtgactaagctcaccagtatcgtaataaaattatcattgtgatgattggaactttgaa atattttgagatgttgcttaacccatgttcaagaaaccatgatatcttaaccatctaaaatttcttgcttgaataggaac ttcctctgagcttgagatcacagcacaggcagtggaaggaagggagcggaaaccgaacgaggatttcacaggtatacaac ggaacggttcaaagtctgcagctcgtagaagtagtagtatcatactattcttgatcatccaaaagtaaaagagggaagtt aaagtgaaagcattggatgactgacttacaatcctacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccccacgtgttccacccgaaacgaaaagaggaagaattgaaaagaatg agaatgagagtgagcagccagcaggtaaagttcattttaatgcaacaatgaaattagttgtcagggaaatgataatgact atcatttcgaaggaatttttccatttttttgttatggctttgacttcttagcagagcttgataaactcaatgaaatttag caatctttggctggtgatgtccattttgtttgtgccacccagaaaacataggctcatgcaaaaaagaaaatttcataatc acgagggcatgattactagatgctgattggttataaactgcttggcaacgaagcgttattgcggatgaagccgacggaac cttaattgaggaataataacttaatgaagcctccggtaacgttgttaactgtatcttgagaataaaatgttcatggaatc tattggtcagttacgtttgttttgacatttctggcggcattgaaagggcttcatcgcgcggacatcgtgcgcaaatgtaa ttccccccaaaattttaccctttatgtgataaacaagtaatcccacgtgccctcgggcaattaaggattaatttcacgcg tattttcaaagttctcctcaaaattgcccgagtcgcctcccgactaaaaacacaagtgaaattaatccttaattacccaa gggcccgtgcgattacatattatagtaaacttcctttaacctcattaacccagttgaccactgatgttctgattggtcaa agatttatggcttattgtacggttaaactcggacttataattactggcaatcacgcgtcgtttgatgagtggctcaaatt tgattactttattagaatatgtggttttataaattgatctctgttttcattcgttgtttgtttgttgcagctggtgcttc gtgtccaagccacgtcatagaggggatacgacaagtttaccagaagtgtgaaggagtgattttgccaattccttggtgtg acgaattcagcttccagatagagcaccttttcaccagacttaggatagttgcaaaagaaaagacacgcggaatagctatc acaaaagaagtcaccaacatgacaggtatcttcacaccacacgagtgttgtaaacaaccgcttattgtgttgattgaagg cgaacctggtatgggaaagaccacctattgccaaaaactggtatttgattgggcgagcaaagaatgtcatgaatgggatg agacttttccaagaattgatgtgctcctgttcctcagatgtcgtggaatcaaatctactatctgggacgctattgaagac caaattctgcccgatgaaattaagccagaggaaaaagagatgtttttccaattcttgaaagaaaatccctccaaggtgtt ggttgtgctcgatgggttagatgaggcagacccacagaaactggaaatgtacttgaaacttattcaaaagaagcagcttc ctggctgttacattgttctcacgtctcgccatgaagcggggagaaaagtgaggccatacaccgacacgttgttagaaatt gtgggattcacgagagctgatgcaaagtgtttcattagaaagtattttcagcacgcggaacacttggcagaaaaacttat ctcaaacgtttatcctgattttgatgaggacaaggatttaagggaactattaaaaaaccctttaaacacccttctactct gtgttatcttcgaggatttagagggaattctaccaaccaacaggacgcagctttacgtggagattgttctctttattttg agacgttatgaaagcaagaacggcttatcgaatagaggtaaagaccttttattagtttacaagaaggaactgatgattct tggagaaagtgcgttagactctctgcgcaaacaagaactgtatttcgatgaccaccaaggggatatcaaggaaagtttgt tgatgaagtttggctttctctcgatccagtctggtggtagcaagagagctccttgcgaccgttacgggttttttcataag agttttcaagagtttttttccggttacttccttgctttttctgccattgataatgttactaactcacactcagtactgac cgatgtgagatacgtgaatgaactatttcatgttcttaaattcatgagtggaatcgtagctcagcgatcggaggaagctg cagtgtcaattgtagaaagtattgcctcaactgtaaatgcaattggcctcacatcccctaaagtcgatttttacttaagt gttgctaactttgttattagggaatgcaaaacttgttcaggatacctttacacaaaattagttcgtacccttggtgaaag gcttcagttggttgacgtggtagtgaagccttcctcctatacatggaacagtgaatttactgaaacgtttctccatgccc tcgcctttaactccaccgtttcaagcctgaacttgattgagtggaagtctaccaatctgctcactcaggctctgagagta aacacctctgtttcctctttggatttgagtgggaataacatttttgacgaaggagcaaattcacttgctcaggtcctcag ggtaaacacctctctttctaccttggatttgtctggcaatttcattggtattgagggagcaaattcaatttctcaggccc tcagaataaacacctctctttcttctttggatttggataccaattgcaattttattggtgatgnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagtaaacacctctctttcttctttg aatttgacgttgaattatattggtgatgagggagcaaattcattttctcaggcccttagggtaaatacctgtctttcctc tttggatttgtattgcaattccgtttctgctaagggagcaaattcacttgctcaggccctcagagtaaacacctcacttt cttccttgaatttgtctggcaactccattggggattaaatttatttgatcaggccccagagtaatcacctctctttcttc gttggattctaattctgttggtgtttaggatcttgaggccttttagagcaaacacctgtctttcttctttggattctcag aaggttctaaaacaatgtgtgacttaaagtaatatttcaaaaatgagtgccaatgtttcatcgagtaaacacctctcttt ctt |
Protein
Protein ID | aug_v2a.02784.t1 |
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Definition | - |
>aug_v2a.02784.t1 MASNVSRLQGHDTSHGSNKVQVTILASEWGSSKGGLSTINRELAIQLAKFSCLEVTFFLPKCSEEDKKAAGSHGISIVEA ARRSGYSELDWLSFPPGHLKIDVVVGHGVKLGRQAQVIRESHNCKWVQVVHTDPEELGMFKRYENPISTGQEKHHVEVEL CQMADFVVGVGPKLTEAFRKYLGSCKKHQDVFEFTPGVFDEFSGVQQVPDERKQCSVLVFGRGDAEDFKLKGFDIAAKAV AALSDAILVFVGSPHGKQEEIVKQFTDFGIPANRLRVRSYMEREALKELFYEVDVVLMPSRTEGFGLAGLEALSAGLPVL VSRNSGFGEALGSVPCGSLFVIGHEDPSTWVAAIERIWNKDRKSRLDEVNTVRDIYAKRYSWSEQCEHLIQKMVELVDGT SSELEITAQAVEGRERKPNEDFTAGASCPSHVIEGIRQVYQKCEGVILPIPWCDEFSFQIEHLFTRLRIVAKEKTRGIAI TKEVTNMTGIFTPHECCKQPLIVLIEGEPGMGKTTYCQKLVFDWASKECHEWDETFPRIDVLLFLRCRGIKSTIWDAIED QILPDEIKPEEKEMFFQFLKENPSKVLVVLDGLDEADPQKLEMYLKLIQKKQLPGCYIVLTSRHEAGRKVRPYTDTLLEI VGFTRADAKCFIRKYFQHAEHLAEKLISNVYPDFDEDKDLRELLKNPLNTLLLCVIFEDLEGILPTNRTQLYVEIVLFIL RRYESKNGLSNRGKDLLLVYKKELMILGESALDSLRKQELYFDDHQGDIKESLLMKFGFLSIQSGGSKRAPCDRYGFFHK SFQEFFSGYFLAFSAIDNVTNSHSVLTDVRYVNELFHVLKFMSGIVAQRSEEAAVSIVESIASTVNAIGLTSPKVDFYLS VANFVIRECKTCSGYLYTKLVRTLGERLQLVDVVVKPSSYTWNSEFTETFLHALAFNSTVSSLNLIEWKSTNLLTQALRV NTSVSSLDLSGNNIFDEGANSLAQVLRDLEAF* |