Gene
| Gene Model ID | aug_v2a.02787 |
|---|---|
| Locus | scaf940 : 34090 ... 40332 : + |
| To GenomeBrowser | scaf940:34090..40332 |
| Genes list of scaffold | scaf940 |
Manual annotation
| Study field | Retrovirus |
|---|---|
| Gene name | Adi-Retrovirus-related 53-9 |
| Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, BACK, Kelch_1, and Kelch_2 domains. |
| mRNA evidence |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02787.t1 | gi|557003992|ref|XP_006003983.1| | PREDICTED: kelch-like protein 26 isoform X2 [Latimeria chalumnae] | 7.0e-40 |
| aug_v2a.02787.t1 | gi|557003989|ref|XP_006003982.1| | PREDICTED: kelch-like protein 26 isoform X1 [Latimeria chalumnae] | 2.0e-39 |
Transcript
| Transcript ID | aug_v2a.02787.t1 |
|---|---|
| Definition | - |
>aug_v2a.02787.t1 aagattactcttttctctcctctttcaattttttgctcgctttctcgctcgaaaagaattgcgtggcacccagggtaacc cagggtagtttcagctacaacatggtcgctcattctgagattctcttatcgaaatgtgctcagttccgtgagcaagggga attcattgatgttcgcttaaaagttggagaggacgagtttgcggctcatcgcattgttcttgctgcaaatagcgattatt tccacgccatgtttgcacacggaatgaaggaatcttaccaggatgtgattgagctcaaagatgaaaatatttctgttgct gctatgaagatagtgatggattccatttacagtggagagatcaatgtgaatgatgaaaatgtttttgaagttctgcttgc tgcagatcatcttcaagttacaagtgttgtgcaacaatgctgtaaatacgttcacaccgaagtcgttgggctgaggtttg atgtgcagttatactgccgcgtcatcatggttgcggagcgacacggtttgaaggacttgaaagaggctacggaaagtaaa atggcttcattgtacagggaaatttgtgaggaggaagagtttttgtctgatatgaatgctgatgtattatcagctcttct ctctcgagatgacctcagagctccatcggagaacttcgtcttcaaatcagtgatgcagtggatcaagtacaggaaggaag aaaggttggatgtggcagctcaagttattggagctgttcgtttggggctggtggacacctcggatgtgatcgaggaactc catactgaggaaatgcaagtgatcccaggaataaacatgttgttgctgaaaacattaatacacaattataggccttcgag cagttccacttttgcattggaaagagggagaccaagattaatgaacccggtaggagagagcgtctttcttgttctattaa tatttactctgcacaagaatctcgtttgtttaggtgaggtcacttatttttcttaatcattcaaacagtcctgatccata tctttctgatatgcagacaccccaactccaccccgctgtgactctctaaaatgtcgactttttcagtgcaagaaaatgaa agactttaaaaggcttcagggaatataaaaacatttaaactttcttaacatcagtgtaatgagaatcatgagaatcaggg tacattgcagaaatgtggttagggatgttacgacgtccccttttaactggcgggtgagggttctaatatagttatggtta actagcattggctctacaataaggaatgacctaaaatgatggctaccttttggcagacagtcataagtggggagtgcttt gcctctaaattggtcttccccaactttgtttccaaactgtcaataacagagaaaaatgattgaatttaaaaagagaactt tgacacccaaagcaagtgttgatttgaagagctagagtaaaaaggtcctcataactattgtcccctaaatgatactgtgc tctgcaataaagtgcgtcgttatctcaaccaatcagatgcagaaccaaaacagtctcaactttgacattcgctttctgtc ctgagtatttacctaacattctcattgtcggttgtgaaatttacacttttcctaattggccatgtgataacctttttcag tttggttttacaacacaccatcctcagagtggcgtgctgcatatactcacaacagaatcaaaattcatcaaaagaaaagt gggcgcttgatgcaatttgtctcagggatgtgatggaaatataacaagaaattcatgttgggagtttctgcatatcaaag aatgtcaaactataagctcaggtaaccttaaggatatacacaatgtggcatgtggacagaaagagcagagaaaagcgcaa gtacctatcagtgaacctgtatactaaatagaaggagagtgaatggagaataatatttccttaataagaaaaagcagggg aaattcaaaatataaattaaagtctttcatagaactcatgcataaaataccaaaaatgtggcgaaagaaccacttcctca caagctcatggctttcttggtcctttttagactaactgtggactagccgcataaggcccaaaggacttccctgaagacca atcggcaaacagattttgttcaccaaaccaaaataacgaatttcagagaaaaatctacttcattatatcaatgaaattta cttacccattctctctgaaagctgtctccaacaggtgtattgctcattctgctgtcatggtcaaagagggtcatttgtat gagatgacaaggttttgtgtggccgatctgtcaacaagactatccttgggaagttccaaagtcttacttttcctgctaaa ttggccctagaaacaattcgcttgcctatatctcggtcgattttggttgtattgacctgaaactttgcatgcaagttttt gttgatattgcatattagctgaaaaaaactttcagcaatccaaaagaatcactttagcctccaggaataccttaaaatga acttaaatgataatccaaaatgagtagtgcaccatgtttccaaagaagacttcactttaaaaagttctcaagtggttagg ttgattagtggcttacccgttggattaaagcctttctgtgtgaccatcaacaaagggttagaatagatggtatactctcg cctcctatctcaccgcgcggaggaattccctaaggaactcgattggcacctttgctgtttacggtgttggttaataggct agcggaagattggagtaccaggttgaagtacgtagatgttgccactgttatcaaactcatccctcgaaattcgcctagct atttgccaatcattgcctctgacataaacaaattctcatctcgctgtaacatgaggctaaaggccaaaaaatgtaaggaa atggtcatcgatttcttacggtacaagtctaccatcttgagctccttgatgattggtggcacagtcgttgattgtgttca gtcttacaaactgcttgggctgcatattgccaactatctgacttggaactggcactgttaaactgtgtataaaaaagctg tcaaacgcctttatggtttacgggttctaaagaaagctgggatgtcgacgggagatcttgtttccgtgtactgctcaatt gtacgatctaccagagaggacgcccctcccacctgggcagccctccctcaatacttaagcaatatgttagaaagtgtcca aaaacaagccatgcaagtaatttttcccggttttcgatacgaagatgcactccacttagcagggcttgacccaatgtatg tttgtcgtgtagattggtgcaagtcgtttgtcattaaggctaaagaagtcctcagagttatttatgcgccctctgtcatg gagcatgatcgtaatctccgttaagggaacaaaactgtttacccaaccttaggtcacacagcccattctaataacttttt tacggttaaatactaatgctagatatgtttgctgtctctgacctttcctgtaattcaggtttatacctgctagtggatat nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctaacctctggccacgtgtcatcatgttagatctg attcattcacactaatctgcaacagcatattcaattggcccaggagaatgttccataaaaacttcaaattgggatgtttc tttatgtaaatctattttgtggacagccagatatgaggtaaaattcactcacctaaaattttctgtgtaattgtttcgta acacactacaaggaagtggcagatttccatatttgtactgacgttggttcacgaaaattcatagctcaaggtcaaaaata agtgtgttacggtactccaatggggtctgattgaggcacaggtcaacttacctagactatattgctgtatatactggtat ggtagctctttgcatgtgtatatgtttggctagagtatgtttgttagggacggttcattgattattagaaggatgaacta gtctggtaaaaacaaaattaatgggccttgagaaattttctttccattgtgccaggttttttcttgaacaatgtagtgac ctaggactgaaatgtcgaaattgtggcattctattaaagaagatggctaattttgagcccactaaattgatcaatattac atcaaatgacatttccatttttaaagattcccaatttcaaagattccctgttttaaagattccatgctttaaagattccc cgtttcaaagattcccttccccatttcaaagattccctgtgtcaaagattcctttttccccattccctccttcctgttta aaaaaaaagacttgtgttgttgaccatcatgttttgcaggtacttgttgccattcttcctgagggcatcatctcttattt tgatgtccagtctaaaacatggaaagagttgtcatcaatgcagcaactaactaaggttcaagaatgtttttgtgctgaac tcattggtaattatttgtatgttgcagcaaaaagcaacaaaaactttgtaatttgttgttatgatgtagtttgtgacact tggagcacactcccaccaattcctcattcatcaggtattcagattggctccttgtgccacattgaagaccatctctatgt catttacaagtcttcttcaccttacagatatagcatagccaaaaatcaatggcaatctattgctagctcaaaagctgttt gtaacttggaccaagaagcattttgtaacaaagcagctattgtgttcaaatcctgcttatatgtattgtatggtcaagga caagttctgtgggaaatttctgcgtatgggtgcagttctcatcctgatgtatcttcatctgttctatattgtttcgatcc aaagaaaaatgattgggaacaaaaagcatcaaccaaaactccacactatgggtccagtcttttggtagtaaacaataatc tctatgttgctggggggcattgctcactccaatcatcaagatgtggtggaactagctttccagctggtgatccagctgcc attgaagtttacaatgaccagggaaatctatggtctgttgtaaaacaaacacacatccctaaaaacaaacttggagctgt aaaaattgatgggagggtatatttcatcatcaactctttcccaattgacagtggtattacaatcccaccaggggaggtct accctgttgttctggatgggtgggtaaacttgggaatggttaacagaaaagcagttttgtgctatgttcctgtaaaaaca gagaatcatacaatagaagatgaataaggtgagctgaaaagctgttggaggcatcattattagtgctctgattgcatcat cttcaatactgccaattttagggtttatacctcatctttttttccttccttgtgggccttaatggcgtagctataaccat ttacttttatttaatatagttcactcaacaccttcagggctgtcagcctccccagtttaaagacccaccttcatccaaga ctcattgcggtagtttgtttttgttttgaatctcttttttgtccaaatgtgtgatctcattggctgaacgcactcaagct gttcgaaaagggccgccttctcgtcttgtactcgtcagcttgtaacaactagttttataaatatacaccaaatatgtaca aaataacacaggaacactatagaatgttgaacagggaacgtatttacacaggtggagtaaagtatatgtgcaggttccga ttgtaatgaaaaaagacaatgataacagatcttacaagtttttaaagtttcgtgtcacatgaagttcagatttgccaagt gcgaagcgcaatgccttttgggtgaatgcgggcctattttgagaactgggaaaatgacaaatttcggggatattctggga tatttcagactctaatatgaagaccaggaggtactgtccaaaacctggagtctcccagtattgccatgattgtagtaaat ttactactgtaggaaatggtgaaaaacacgagaaagtattgctacatgaggtgtactaagtgtgtgaagggaatacaaaa aagtgaaaaataacgcaacattattgctatgctaagtttactaagggatatggaaaagtgaaaactacagaaaagtgtaa aaa |
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Protein
| Protein ID | aug_v2a.02787.t1 |
|---|---|
| Definition | - |
>aug_v2a.02787.t1 MVAHSEILLSKCAQFREQGEFIDVRLKVGEDEFAAHRIVLAANSDYFHAMFAHGMKESYQDVIELKDENISVAAMKIVMD SIYSGEINVNDENVFEVLLAADHLQVTSVVQQCCKYVHTEVVGLRFDVQLYCRVIMVAERHGLKDLKEATESKMASLYRE ICEEEEFLSDMNADVLSALLSRDDLRAPSENFVFKSVMQWIKYRKEERLDVAAQVIGAVRLGLVDTSDVIEELHTEEMQV IPGINMLLLKTLIHNYRPSSSSTFALERGRPRLMNPFGFTTHHPQSGVLHILTTESKFIKRKVLVAILPEGIISYFDVQS KTWKELSSMQQLTKVQECFCAELIGNYLYVAAKSNKNFVICCYDVVCDTWSTLPPIPHSSGIQIGSLCHIEDHLYVIYKS SSPYRYSIAKNQWQSIASSKAVCNLDQEAFCNKAAIVFKSCLYVLYGQGQVLWEISAYGCSSHPDVSSSVLYCFDPKKND WEQKASTKTPHYGSSLLVVNNNLYVAGGHCSLQSSRCGGTSFPAGDPAAIEVYNDQGNLWSVVKQTHIPKNKLGAVKIDG RVYFIINSFPIDSGITIPPGEVYPVVLDGWVNLGMVNRKAVLCYVPVKTENHTIEDE* |
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