Gene
Gene Model ID | aug_v2a.02845 |
---|---|
Locus | scaf962 : 94024 ... 102602 : + |
To GenomeBrowser | scaf962:94024..102602 |
Genes list of scaffold | scaf962 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
lysine-specific histone demethylase 1a-like isoform x2 | GO:0003677 GO:0005634 GO:0006357 GO:0008134 GO:0008283 GO:0010605 GO:0016491 GO:0031324 GO:0032452 GO:0034720 GO:0045637 GO:0048522 GO:0050660 GO:0055114 GO:0065008 GO:0065009 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.02845.t1 | gi|156383987|ref|XP_001633113.1| | predicted protein [Nematostella vectensis] | 0.0 |
aug_v2a.02845.t1 | gi|584007145|ref|XP_006798546.1| | PREDICTED: lysine-specific histone demethylase 1A-like isoform X2 [Neolamprologus brichardi] | 0.0 |
aug_v2a.02845.t1 | gi|597791809|ref|XP_007258997.1| | PREDICTED: lysine-specific histone demethylase 1A isoform X7 [Astyanax mexicanus] | 0.0 |
aug_v2a.02845.t1 | gi|597791800|ref|XP_007258994.1| | PREDICTED: lysine-specific histone demethylase 1A isoform X4 [Astyanax mexicanus] | 0.0 |
aug_v2a.02845.t1 | gi|597791806|ref|XP_007258996.1| | PREDICTED: lysine-specific histone demethylase 1A isoform X6 [Astyanax mexicanus] | 0.0 |
Transcript
Transcript ID | aug_v2a.02845.t1 |
---|---|
Definition | - |
>aug_v2a.02845.t1 catttctctccgccagattatcacgctgaattttatcccagtttccactatttatttccaaagttagaagttgaactagg ttcacttaaaagtggccagataggccaagtatcatctaaaatttgataatgtcgggttcctatccgccaccaattctccc aaagccggcaagtgttcttccttttatagcaaccaagccaaacatgccaggtcagggtgtgaatggaaatcactcagaat ctaataaggtgaacgaaaaatggaataatggatcacctactgaaattttcgacgaggattcagacctgtccagaaggaca agccaacgcaagcgccctaaagtatgtttcacagtttgtcttcattatctaaaattggcattcatgatatattatgcaac attcttcaatttactgtcaacaatacggttttgtgttgagccttagccttttaattagggtttcaaatggaaagtatttc cagagcaaagaacagacgtctgatatgttaagaatggggctttctgaaggaagttttatgtgacctccaatccgggacgc taaatttatgcaacactcaataaaatctgtcaaagcggcgattcctgactggctaggagcttcatgaaagtcacatggcc tttgttttaaagaaactttccccgaaggtgcctactttagtttccaagattttaaggggtaaagagtcaaggaaagtgga agaacgtttcttgtttccttttaaaggaaaaagtaggattttgacaagatttcagaaccagaatttacggaaaccttacg tcattttgtaaacaattaaaccttgtaatcagaaacacgcaacgggtgcaaagtggcactaaatttgtctgaacagttcc attaagacggaatttccttcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaagcggcgaaggtatgaaagatttct gtttggagccgacgaaatccgtctgcaaagtagacgaaaatacgcgaccctcacatgctccgtccatgtgttaaatagga tgtttgaagtaaatgagaaaatgcattgcttttaacccatataaaggtttgaaattgtgcagcgacaattaagaagctgt tgtaatgagcaacagcatagactgacttctgggtgtcggaggaaaaagcaaaaattttggaaaataaaggagtgttattt agctggtttgacatttagctagattttgtattgtaaaccaagagatttgttactcttttcttcatttagatatattcgtg aggttttctgttttacgaaaaatgttaaatgtgtacaaggaaagaagtccttttttgtattttaccctgcctcatccatg aagtttccatgtatgtaatatacaacttattctgtgaatagatgaagatctccaaggaaagttttttattttaatccctc caaaaaaggcacttctttcaaatcattttcaagccaccacaattttatagcaaacacttttgtgagaacttctgttggaa tgatgacaagttattggtgttgcataagaattagtgtctctgaaaagcatgaactgtccattcaggggaaggtgtctgaa aatcagaagaatactgtcatttcaggttgaatacacagaggttgatgtgaaactggctaatttgacagatgaagaattat ctgatgatgacattattcagagaagctcatcgcgtttatctccaactaccacaccaatggagactgaagaacagcgtgag ggagaagaagatgaagaggaggaagatgtacccgagggtaagcatcaggtcaagatttacaccagggctttaaaatttgt atatgagaagtctagtttcaagttcagcaagattgccatcaaactaacacactaagcacacttggggtgcacggatggcg cagttgtgcagggatggcactgtggtgagagcacttgcctcccaccaatgtggcccgggtttgattcctagatccggcat caaatgtgggttgattggttggttgtctactctgcaccgagaggttttctccgggaacnnnnntttttgacgtcatctgt gatctattacagaacagacacacagcaacatggaatctatttgttaataaaaaccccaggcaacagagtttttcaaagtt ctcttgcggttatcattgcttattacgtctatttctcagtgcattgtggcatatggaatataaattgcctcattgttgtc catttcatacaccttttccaaaatggcggccaataaattattcttttgtctgcatgttaattagcccttgatgccttgtc agcatgtagaaaacacaaaagaattttgaagtgaaagtgaggcaaggatggctcataaacacgcaaaacaaagaataatt tattggccgccattttggaatgaggtgtataccgatagtttttttccttactttatgaatttcgagggttacagtgtgga aaaacaaatgtacatcaggttttcttaatactagttgaattttcaataattccaggccatttttgatgttagagacagca aatttttttggttacgttgcatgctgacaatgcgaaatgatccatagccttgtttatgtgtcaaaaccactgatagctgt aataacagctactccgaaatttcatgttcttggtttcttttagtctcgcattttaagttcctattagcacttatcaaaat ttaatgatgaattaactaagtcatccaaggtttccttttgtccttttgtgggagttttggttttattctcaaagaaatat ataaacacatgatatttggaaatcttgtcaagtccttttttttcttgttgttatggtaccaataggacttgaaggtgctg cttttcaaagccgacttccctttgacaagatgacttcacaagaggcaacatgttttcctgatgtatcccagggtcctcca caaattcagaaacagttcttataccttagaaacagaatggtaggggaaagctatctatctgtatgagtaaatttgactaa attacagtgtgcaggcatgacattgtttgaaactatgggagggttccatgtgaagtgtaggataccacagctctctgatc ctcttccatcagtcatatttagctcttgactttggaaacaatggaaatgaagttgaaggtatcagcagaagtcttaggtt ctgctggctgtaaacatgccctacctgatgaaaggtttagttccatgtctttggaaagctagacataaaagtttggtatt acagtgcttgttattgcaccttgccatgaccactcaacaagctttcacatttgacaactaagtgtaaatacatcaactct gcaacccatgccacattcttcatcttgcaactgtgtgaactttgcaatgaggcgtgactgtcaatctaattctcacaccc ttattggcatatcatttgtaaggaactttgttaggtggctacgttaaggtgtgttgcacttcaaaatagtttgatgaagg tcaaatattacgtacattgttaaaaggtaatgaagatgaagtttggagcgtgaactctacacgagagcgagtaataataa ttttattgggcacagtttgttagtttgtgttgagtcaatgacttgaatcttccatttgactgagtgtagcagcttgtttc atttgcttcgcgccaactacagcaactcattccatttgttcttttgccaagtaagagaacacatttcatttggtgactta attatcaattcctaagtagccactgtggtgctgggcatgataggtgctatgatgacattttaagatggcacaaatttgga acaaaccaaaattattatttcttgcacttgaggatgacacagggagcccttgaacaccgggatcccatgaacaccgggat accaacgccaaccttatgagacagctgctctttcaacacaaaaagaactgttataatcaccaagataaagctgtgaaaca atgatggtgacttgggtgtagtgcaaattatctaaaagattcatgctttacagtttgttacaagaaatttcatatagtgc atcaacaaaaactctgtgattttttttaatcatagctgcaattgtgggttgaaaatcccaggcaacagttgacactggaa cattgcttgtcacaagtggatccttctcaaaatagttagtcttcaatcattacttctaaaataatagtttttattgattt tatatcatgttattttattttaatccttgatatttaaaagacaactacaggcagatctaaataatattattattactagt cttatctttaacttgaaagataacacacaatggcatgttgtttaccaagctagattagctggaaaataatagtactatga aactgtttgcaaataagtgatgtgcaaaaggtctctggtaataactggtgtatcctttaaaaattagcttggacagagac agtaatttatggtcacataattttttttttatggttacatttctggtgatgacctgcatatccttcaaagattagctagg acagagacagtaattgatgtttacataataaaggttggctgcatagcactgatgatagaatgatctaagtagctgtatag ggtaagttgcagtgctaagtaaatttccaaattatcccatctgagcattagccctaggaagggaaatgggcccacatgag gacaggcctaatgctcaggtggtataatttgatgtccatatttgctcacacccactgtatgaacaacacttcttgaagga ggaaaactcagattttaccttttgaatggagaggacctggagcccattgtgttgctatggaaatgtcacaggggacgtat catggaacttttagaagagtgtaacaatggtataaagtttcagttctaaagagaaaaagtcttgaaagattttctatttt ttgtgattttaaatcattttgtgtccgcaatgtgacttctcaaatcatctaatttccataaatcaaaatcttgaataact gagcaaccaattctcagtgttctccttatcaggcggtaaccggtaaaatttaccacctggagcaacagttcttaccacct gcaacctcttgagggtttactaaaactacatgagttgttttagaaaataacggtcaggaattgtcccttacctgctgaga taaaacttagggagaacactgcattcttcatcattttgaaagatgttttgaattagtcaataaaaaattacattttaaat aatgcaaccattgtagaccaacgcaacagatgaaactannnnnnnnnnnnnnnnnnnnnnnnnnnnttgtcttaaacatc ttcaccgataataaagcaaaaagtattcattttggtgcctaaaaaaaacttttgcaactaaaccttaagagttggtcacc aatagacctctttagcttatatgttttgttttttcagttcagacaacgtgatgcttctcgagggaatagtttctttcaaa tttcattttatgcacgtgcaaatgtatgcacaactattgaaaaacaaacagaaaattcccatgagggcatcaggtggtct gaaatgggaaaacaaaatgtacaagctaagaaggtctattggccactaaagaaaaaatcaacttggaaggttgatattgt ggtcattgtttgtttgtgttttcctttagatgacgctaagcttgcctccagagttcatgcctttctctccagatatggtt tggtcaactttggggtgtataaaattctcaaaatgccaccatcatgtaagtatcattgttttctagttttgtcattgtta ttaatgacctaaaactttccttttagatcttgcattgctcccattatcacttgtaatgaaataaagcagagtatgttgga agccaggttccacactggccaagttttataataaaattattgaacagattttgcactctaaacttcacctgcagtttact gttgtattgtcattattcgttagaccagttttcaaatgactgttgaaaaagccagtgccaaagtaattattactctgacc aatcacaacaggagcaaactgcacaataaaccaatcagaattccttgcagttgcccgtaaaatgatcaaactgcgggaaa aatcatgtgtgcaagttacaattatgattatttattggccttggttttgcctcttgtctattgaaaaactggcatgagat ttttaagccaattattaagtgcggcaattgcaataattgagtaattattttcaacagttgcttgaaaaccgctctgtgct atcatcatcattcagacaacaacattcagaaacattcccaaatgggtaaatcctattgtcactagtgttgaggccaaaaa aagatgttatgaaagccaattcctaaataactacatcaacatcttcttggtggcactgtgaaactgtgttttgcaacctt tgtgtttttgctttcagtgaagaaatctccaaaagtaataattgttggagctggaatctcaggtctcactgcggcaaggc aattgcagtcctttgggatcgatgttacgattgtcgaagcaagggtgaataatgctagtgtatttgtatacaacaattat ttttatgttgttagtggtttcaaattaattttctttaattgaagaatccaatgttattattttcaaccaggttaacattt tccgcatgtaattttttggtatttaatcaaatgatttaaatcaagtgacagttaattctcacaattattgtgcccttgaa agtaagccattggcgcaccaggttccatttctcatttctcagctgttgccttagaagttgaaccatggtccattctttcc acaccctttcctttccaatcaactgcattctaaactccaatgcaaactaaacaccgataattaaaataaatatatcatac agaagctcatgttctaattttaatcatggtgtgttttttgtgtgtgtacaggagctcgttggtggaagagttgtcacatt ccgtaaaggccagtacattgcagatcttggtgccatggttttgactggtttaggtaagtcagtaaccacttcttgtaggc caaagaaactgtcctgttgtttctagtgggaaagttgtatatatttgcaacctttgaaatccctcttttttgttgataat gcacttaaatatacatgttgttttgagattaatctcaagccattgtgcatgtgttcagtcacacaaattattgtactcgc agatgcattgtccagtttcaagcctgcaattattatttttttctttaagctagcctgcaaataattttttttttctatac gcctgtcatatgtcttgagggagggataaggtttgacctgacatgcagccagtttggttggacaagaaagagaagagaga ataatatgtttcagtgaaacannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttgtaacttagatgtgaaacgtgag ctgtaaatgaaaatgcattacagtcattacatttaaaatcacctttgattttttttctggagtgatgatctatttttgta tttcataacataagagcctggtcttcatgtccggtcagacttagcattcaccagtcaaaacctcaaattgggcggacaat aattattctctgatgaccagaactaatttgcaggcttaataggcctgtcctgtccagccaaggacacacacaacttctgt atgaatattggcagtagtagtgtgtttacattaattttaacatagacatgagtgatatgcgagctgtaaatgaaaacaaa tcaaaattcattacagtccaccttcacatttgcttgtgaaaagttatttttatattttacatcataacagaagaacccag tcagcatgtccagtcagaccaatatcggatgactggggctaatttgcaggcttgagttgctcccttgtactgtatcctaa ttaaaagaacaagaaaagt |
Protein
Protein ID | aug_v2a.02845.t1 |
---|---|
Definition | - |
>aug_v2a.02845.t1 MSGSYPPPILPKPASVLPFIATKPNMPGQGVNGNHSESNKVNEKWNNGSPTEIFDEDSDLSRRTSQRKRPKVEYTEVDVK LANLTDEELSDDDIIQRSSSRLSPTTTPMETEEQREGEEDEEEEDVPEGLEGAAFQSRLPFDKMTSQEATCFPDVSQGPP QIQKQFLYLRNRMLQLWVENPRQQLTLEHCLSQVDPSQNNDAKLASRVHAFLSRYGLVNFGVYKILKMPPSLKKSPKVII VGAGISGLTAARQLQSFGIDVTIVEARELVGGRVVTFRKGQYIADLGAMVLTGLEEPSQHVQSDQYRMTGANLQA* |