Gene
Gene Model ID | aug_v2a.02909 |
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Locus | scaf997 : 72866 ... 76185 : + |
To GenomeBrowser | scaf997:72866..76185 |
Genes list of scaffold | scaf997 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 1-1 |
Description | This gene model contains RVP domain and RVT_1 domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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integrase core domain protein | GO:0005488 |
Transcript
Transcript ID | aug_v2a.02909.t1 |
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Definition | - |
>aug_v2a.02909.t1 gtactcaccaagttaatcatgaccagggaaactggagacgggcggggcgcagccagaagtgatcccgcccgataaaccta aaggtgcatttatgccgtgtcgtgtgaatggtgtcctatcttatgctttactggacactggtgcagaagcaacaattatc agtgatgacatttatcatcgtagtaacactaatgcaagtaagcttgaacccccacgaaagcctgttcttggggccaataa cttgccgcttgatgttgttggtgaaacaaagttgacccttgagcttggtagtatcaaagcgcaacataaggtgctagtat gtcgcgggttaccacaacaagtgttgattggcagagattttctcatgactcacaagtgtattattaactttgacaataac actgtatacagtaaaggagatcccaatagcatggtgtttggtccccttgataaagtctacaggatcaccgtcgctgaaac tgtaacattatcaccaaatatggttgctgatataccttgtgtgattgagggggtgagtggtcacaaggaatgtgtgggtg tggttgaaccgggaagtaagttctcagaaaggtattctgttggagccttgcggactgtagtaactgtaaaagatgggcga ataccagttcgtgtgtttaattgcctcaacaagcctctgaaaatttatcgcttcagcagtgtaggagacctccacccact agtggatggaggtgatctgcctgttaaaggtgcgagtgagggttacaaagttgtaaagggtgctaaagaacatgtcaagg tagagttgggggctaggcagtatagtgcagtttttgtggaaaactctgaggctgatactgttcctttcgaagaaatgttt cccataagcagtgattcagttccggaagaggaaaaacgtgagcaccatgaggttctttctacctatgctgactgcatttc aagggggccatgggatttaggctcagcaaaaggtgtgaaacataccattgacactggatcagcacagccaatacaggtac ctcctagaagagtcccttttcataaaaggcaggaaatgtgccgccaagtggaggaaatgcttgaagcacagatcatagag ccttccgaatccccgtggtcctctcctgtggttttggttgccaagcatgacggcactcaacgcttctgtgtggactatca aggtctgaacaaggtaaccaagcgagacttgtatccacttccacggtgtgatgacatattggagagcttagctggtgcac agtggttttctcaccttgatctgctccgtggatattggcaaatcgatgttgtggaagaagatcgggagaaaacagccttt gcaaccccagaaggtctttaccagttccgcaagttaagttttggccttactaacgcaccagcatgtttcatgagggccat gcatcttgtcttaaaaggcttgtgctggtcagaccgtctagtgtatctagataacatcattgtctttggccgaaccctac aggagcatagagagagactgtcactggttttgtcgcgtttgtctgaagcaggcttgaagattaaccctaagaaatgcaaa ttcttgtcagaacgagtgattgtgctcggtcatgtggtgacccgggatggcatttctactgatccagagaaagtgagagt cattaaagagtggccagtgccagaggacgaaagccaactgaaggcattcttgggaacagccagttactaccgacaatttg tgccaaactatgctgccattgctgcccctttacaccgtgcttctcaaaagggtgaacgttttagatggacagtgcagtgt gannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaggaaacagag cacctagtgagagagaacctcaagcgggcgcagagaactcagaaagcttactacgacaccaggtgcgagggtcaacggtt tcatgtaggagaccgagtctggtatcgaaaccgagctaggacagggaggaagaaattccttaagccttggtgtggtcctt ggaagattgtgaaagccctgtctgatgttacctatcgtattgaagaggagaggaagaaagcggcgcagcgacgcaacaga aaggtggtccatttcaattacctgagaccatgttttacaccgccgccagtccatgagaaacgtccccaagcaaacacttc cggagaagcggctcgatcagagccgagagatgtgctacagccaacccaggaaggggctgatgattctagcggggtcgaat tggaatggctggcagatcctgttgttctgaccacagagggccatgtaacgcctcgggttcagggagcaagtgctaccctc gatccggatgcacaatcctcggaagttcctgacccgccggaggtcctttcagtgaacaatgaaccaagtcaaattccagt tagaccgagacgcgaacgaaggtagccctctttgctccgggactatgttagaacagttgttgtttatcctacgtggcctt ttactcttgttggagcaattgcttattaacttttcgataacttaagctctaacctctgacttatttgggagggggtagtg tagcgtagggcctgagcccgacttagttcggacatgcgctgtggctcagtgtacgacgtgcttgtagtagatttgcaagt tgtgttcgtgtctgatgacagataaagcgtttttgagaat |
Protein
Protein ID | aug_v2a.02909.t1 |
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Definition | - |
>aug_v2a.02909.t1 MPCRVNGVLSYALLDTGAEATIISDDIYHRSNTNASKLEPPRKPVLGANNLPLDVVGETKLTLELGSIKAQHKVLVCRGL PQQVLIGRDFLMTHKCIINFDNNTVYSKGDPNSMVFGPLDKVYRITVAETVTLSPNMVADIPCVIEGVSGHKECVGVVEP GSKFSERYSVGALRTVVTVKDGRIPVRVFNCLNKPLKIYRFSSVGDLHPLVDGGDLPVKGASEGYKVVKGAKEHVKVELG ARQYSAVFVENSEADTVPFEEMFPISSDSVPEEEKREHHEVLSTYADCISRGPWDLGSAKGVKHTIDTGSAQPIQVPPRR VPFHKRQEMCRQVEEMLEAQIIEPSESPWSSPVVLVAKHDGTQRFCVDYQGLNKVTKRDLYPLPRCDDILESLAGAQWFS HLDLLRGYWQIDVVEEDREKTAFATPEGLYQFRKLSFGLTNAPACFMRAMHLVLKGLCWSDRLVYLDNIIVFGRTLQEHR ERLSLVLSRLSEAGLKINPKKCKFLSERVIVLGHVVTRDGISTDPEKVRVIKEWPVPEDESQLKAFLGTASYYRQFVPNY AAIAAPLHRASQKEHLVRENLKRAQRTQKAYYDTRCEGQRFHVGDRVWYRNRARTGRKKFLKPWCGPWKIVKALSDVTYR IEEERKKAAQRRNRKVVHFNYLRPCFTPPPVHEKRPQANTSGEAARSEPRDVLQPTQEGADDSSGVELEWLADPVVLTTE GHVTPRVQGASATLDPDAQSSEVPDPPEVLSVNNEPSQIPVRPRRERR* |