Gene
| Gene Model ID | aug_v2a.04627 |
|---|---|
| Locus | scaf1708 : 17379 ... 21305 : - |
| To GenomeBrowser | scaf1708:17379..21305 |
| Genes list of scaffold | scaf1708 |
Manual annotation
| Study field | Flagellum |
|---|---|
| Gene name | Adi-centrin1 |
| Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. XP_001699499 for a corresponding Chlamydomonas gene. This protein is a subunit of inner arm dynein. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| centrin-3 isoform x2 | GO:0005509 GO:0005814 GO:0008017 GO:0031683 GO:0032391 GO:0035869 GO:0036064 GO:0045111 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04627.t1 | gi|156395216|ref|XP_001637007.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.04627.t1 | gi|573876594|ref|XP_006626568.1| | PREDICTED: centrin-3-like [Lepisosteus oculatus] | 0.0 |
| aug_v2a.04627.t1 | gi|677989526|ref|XP_009075108.1| | PREDICTED: centrin-3, partial [Acanthisitta chloris] | 0.0 |
| aug_v2a.04627.t1 | gi|557007687|ref|XP_006005113.1| | PREDICTED: centrin-3 [Latimeria chalumnae] | 0.0 |
| aug_v2a.04627.t1 | gi|542171658|ref|XP_005493828.1| | PREDICTED: centrin-3 isoform X2 [Zonotrichia albicollis] | 0.0 |
Transcript
| Transcript ID | aug_v2a.04627.t1 |
|---|---|
| Definition | - |
>aug_v2a.04627.t1 catgtgcaattcatttcaaacggttatttacgcgttgtttcccgaagcaacagcccgcgtgcaaaaaaagtgagaacgca actggaaatacaaacgaaagctcttaacaaacatctgctagtagaggaaatgagtctttcattaaagacgccggatttta gcaaaggaagaggtgcaaaaggcaaacgacgagagctgggggaagagcaaaaacaagaaatcaaagaagcgttcgacctt ttcgatacagataaagatagagcaattgattatcacgaactcaaggtacgaatgaaaaaggaactgaaactgttatctgt tataggcttatcgtttatacgtttctctgttctttttataaaaaaaagaattataaatggtacgctctggatcgatccct aagggagatattcaaatacatttccaatatgtatttggcgtctaaattaagccagttttcgaattttatgcaattgacct tttggggtttactcaggaaattgtcacaaatcaaatgaacgattaggggacagggacgtccaaatttcttttactgttgt acagaaaaattatcgattcacaaaaacattcgtttagttggcgttagtgtactaaattatattatttaacactgattttc tctgtgtaaaattctcaatatctcaacgttcttgtctgcttgccgaacaatccttcaatcataactatctgaggaaattg accagacagagacatcaattgaacgatacacaatgatatcaacagtaattattgtcaattacgtgttgtggacaagctct actttgtcgagttctgaaggccttactctaaaaacactcatttagaattatgcaaaaatgtgttcgcattattgtgatgt cttcaagttgtcaaaatgtgttttctcctttaaacatctgaagaggcttgtttgttttagcatgctcctaattacaccaa gtttacatgtgaaagttcatttctcaataacatggtaatgttgtgtgtaatagtagacattcttatgcttgaagtgttca caaagatttctgaccaagaatggcctttttacactcttatactctatataatgatatggtacatttagttacttaataat tacattcacagatgatttatggaaactctaagacctgtggtagtactgtaaaactttctgaaataattgtgcacgttatt taataatattattctcatagctatagttgaagatattcttcaaagctcttaatggccaacctgatttttcggtgttctgg ctgtttttgagttcaccgtcaacttctaacctcttactaaccgagcgcgagggccgtactggtgaatattggcccgaggt tgtgacagtacagaccgagcgcagcgaggtccgtacaaaaacatccgagggccaatattccccagtacggcctgagcaag ctcggttattaagtagtttattatatggcactctgtccctgattgtaaaatgcacttctggtggcttgcacttaaaaaat atttgtcttcttcacccatctttgaaatttcgtaaacatttaaatctttttagcttctgctggtagtttcaatctgaaga attacaattttcacactttttttcgctgtcttcgttgcaaaggttgaatttgccggctttgctccaaaacaaaaatacac ggattggaccgtttccatggaaacggtccgtactgcaaaatcctgaccgagaaagaacccaccagagcacagggatttgc ctaggactgggtttgccatataatgaaataatttatagtttattggtgtgaggttgtcaaacatattattttaagaagga gtgttaaaaaagtcaacagaacttgggaccagggaaccctatgttatattgtgggactggtgaaacgatgatagtgagtt cgattgatttactattattatcattgttattcttaatgatggttttcaggtggcaatgcgggctcttggattcgatgtga agaaagttgatgttctaaaaatcatgaaagattatgacagagaatctactgggaaaattacatttgatgacttcaatgaa gtcagtaagtatgcaaatgaatctaaactaaggtgataagaaagagagagttgagacaaagagcccctaaacagcagtgt taaaacttgacagatggagctatttttagatggaagagtgggataacctcatacatttatttcatgatcaaagtgtttgt tttccaaattaattttaaacatgggacatactctttaggaagccaataaaattttgtgtaacagtgcatgttgcttaaat gtagtgcagtattgaactcatttttgcaacattcaacacctggatgactaatacactgtatacttgctttggcttacact ttccagcatttcagtttcttcagttatttccatgaaaattccattccatttccatcaaaagttactggtttttatttcag tgactgactggatgttagacagagatccacaagaggaagttttcaaagcattcagattgtttgatgatgatgacagcggc aaaataagtctgagaaatcttagacgagtagcaagagaacttggtgagaatatgacagacgaggagcttcgcgcaatgat tgatgagtttgataaagatggagatggcgaaagtgagttatttcttctaccaagtagagtacattgaaaataggaaaatt ctataatattccttagtgtctggaaatggcttgaaagcttgaacaaataactagtgtttgaacaagctttcaaatgagta gggttcaaagtcatgaagctattattattattgtgatgatcaacctgaatcagtgtttcaaataatattatttgtcttat tgatgagtaaaattattactgttagggagcattcatttttaaaaggggggggggggggtgggccagaggaattcagggga gtgtcattaactttttgcctgcccaaaaagggagggtcaacataaatttgacacaacaaagaggtaggtcactataaatt ttactgctttccaggggagggtcacattttttaacaattaatataaagggaggggtggcagattttacattcttgctcat agggattcctccagcccacccccctttctaaaaaatgaatgcctccttatgtagctcgaaactcagtttggtgttgaact ggaaatttcccttgggagcaggttgccacaagaagctatgggttgctatagtctggtcaactcttttcatgtgtattatt gtcattgttatcaattctgttattactattagtattatgaccgtagtgtcaatggtttggaagttttgtgcatttaagat acctgttatgactgcatcaattgtcaacttagctagtatgaaaggttttgaattttattgttgtaaaagctgtttaaaca acttgaactgtagataacgagtcatcaaagtactgtacctggagtaactttgtgcaatgtaatattgtgttagccatctt tggcctgggctgtcaggccaagtttctaccagtgaggcaagcaatacacataagtaacaaactgttgttgattagtgtac aagactgaagagttgaaatctttgacttgattattaccttgtccttaactcaatcctttttctacagtttgcacttgaat tatagtagtgatgaatgttcattttatcttttagttaatgaagaggagttcttggccattatgacaggggacacatgaaa tgaagatacctcttcaaaaagctgtacattttgttcaaaatctcttcagacaaacattgtatttttgtaaaggaccaact caagccatgcaattatgtactactaaagatgctgtaatatacattttgttttattgagggtaatattacatcaataatta ttatttt |
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Protein
| Protein ID | aug_v2a.04627.t1 |
|---|---|
| Definition | - |
>aug_v2a.04627.t1 MSLSLKTPDFSKGRGAKGKRRELGEEQKQEIKEAFDLFDTDKDRAIDYHELKVAMRALGFDVKKVDVLKIMKDYDRESTG KITFDDFNEVMTDWMLDRDPQEEVFKAFRLFDDDDSGKISLRNLRRVARELGENMTDEELRAMIDEFDKDGDGEINEEEF LAIMTGDT* |
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