Gene
Gene Model ID | aug_v2a.05833 |
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Locus | scaf2130 : 37836 ... 38865 : + |
To GenomeBrowser | scaf2130:37836..38865 |
Genes list of scaffold | scaf2130 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 33-1 |
Description | This gene model has zf-CCHC and RVP domain. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05833.t1 | gi|584023241|ref|XP_006806265.1| | PREDICTED: PAX-interacting protein 1-like [Neolamprologus brichardi] | 5.0e-40 |
Transcript
Transcript ID | aug_v2a.05833.t1 |
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Definition | - |
>aug_v2a.05833.t1 aaagctgtgacgcaaagaaggtcttcagagctggtaaaagaacatcacgaaatccttaaaggagatggcgaagatgggaa aattaactgcatttgagaagagaagagaagaccgccaaaagataaaagaaaaatgcccgaaaatgctgaagatcagaaaa attccacaagacctcccgtgaagaaatgttatcgctgcggcaaaacgccacataagagagaggaatgtccagctatcaac gccacttgccggaaatgtaagaatcgtggtcattacgcttcagaatgtaaaagcaaagtcgttttttcggtagacgacga gagacaggagggaaattccgacaaagcttgttatttcctaggagcagtcgaagacaacgagtcccaaacaaaatggtccg tggacttatcactgggaaaaacacagatgcgatttaagatcgatacgggtgcgaacgtgacagtcatcccagagcccttg tacttgcaaaccggattaaacaacttggagaaatcctcacgacaactgtttgggcccggccagtctaaactctctgtcaa aggagtgatcaaaggaaacctgaaaaccggaaatggcaaagaaatcgaaagcacgcaagaaatctacgtcgtggaaaatc ttaaagaaccgttgttaggccgaacagccattgatgcccttaaaatgatgaaaaaagtcgacacaatccattctgatgac agtggaagaattgagaaagaaattaaaacgatgtaccccaatttgtttaaaggtctgggagagttagaaggagagttcag catcaagttgacatctggctcagcaccttatgcgatagcaacactaagacgtgtagcactacctctcatgccgaaggtca aggaggagttgcagagaatggaaaaacttggtgtgatttcaaaagctgacataccaactgattgatgtgcaggcgtggtc gtttttcctaagcccgatgtgagaattcgaatatgtgttgatctcacaaaactaaatgagagagttctat |
Protein
Protein ID | aug_v2a.05833.t1 |
---|---|
Definition | - |
>aug_v2a.05833.t1 MPENAEDQKNSTRPPVKKCYRCGKTPHKREECPAINATCRKCKNRGHYASECKSKVVFSVDDERQEGNSDKACYFLGAVE DNESQTKWSVDLSLGKTQMRFKIDTGANVTVIPEPLYLQTGLNNLEKSSRQLFGPGQSKLSVKGVIKGNLKTGNGKEIES TQEIYVVENLKEPLLGRTAIDALKMMKKVDTIHSDDSGRIEKEIKTMYPNLFKGLGELEGEFSIKLTSGSAPYAIATLRR VALPLMPKVKEELQRMEKLGVISKADIPTD* |