Gene
Gene Model ID | aug_v2a.05925 |
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Locus | scaf2181 : 22266 ... 26715 : - |
To GenomeBrowser | scaf2181:22266..26715 |
Genes list of scaffold | scaf2181 |
Manual annotation
Study field | Retrovirus |
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Gene name | Adi-Retrovirus-related 32-1 |
Description | This gene model has Retrotrans_gag, RVP, RVT_1 and rve domain. |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
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uncharacterized | GO:0005488 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05925.t1 | gi|641654061|ref|XP_008179051.1| | PREDICTED: uncharacterized protein K02A2.6-like [Acyrthosiphon pisum] | 0.0 |
aug_v2a.05925.t1 | gi|751233195|ref|XP_011170263.1| | PREDICTED: uncharacterized protein K02A2.6-like [Solenopsis invicta] | 0.0 |
aug_v2a.05925.t1 | gi|688550329|ref|XP_001337220.2| | PREDICTED: uncharacterized protein K02A2.6-like [Danio rerio] | 0.0 |
Transcript
Transcript ID | aug_v2a.05925.t1 |
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Definition | - |
>aug_v2a.05925.t1 ggaccagtttattctcttaaacacaacaaattggcgacgaggattgggatcgtgatttactacgatgtcacaaccattac aagctcagtttggtattctggagccgctcgatggcgttgattttacagattacagtgaacgcttaaactcctatttcgtg gcaaataatattggccaagttacagcagatgcttccgatactgccaaacgagaagcggacaagaaaaaagttgccgttac aatttccctgattggtaagcaaacgtatagcactcttaaagatctgtgtttaccaaatttacccgcggagaagacatacg atcagcttacagaaattttgaaaggctattacaagcccaaaatacttgaagttgcagaatcctaccgtttccatcataca cttcagagtgaaaatgaaactgttactgaatatgctaacaagttgaaacgtttagcagtgaactgtaattttggtacata tcttactagagccttaagagatcaattcgtggggggtgtgaaaagtcaagctacaaagaagaaactcctttctgaggacc gtactttcgaacaagcgttaaaggttgctcaagcagacgaattagccgaaaaagaatccaaacaactttagtttaattct aatttaagtgctaaagttcaggctgtgcattctgtgccaaagaaatcatgtctagcacacccagtaaacaaacaacatgt agcgattactgggaaaactcatgcgaaattttgttttcgttgtggatcctcacaacatttggctgataagtgcagccaca gcacatctgtttgtaatttttgtaagaagaagggtcatatagccaaagtttgttttaagaagaaaaaggagggtagttgc cacacaactcaccttgttacagctacagctactcaagaagtaaacactaatgaaggtcatggagacactcctgaccgttt taccctctacatgcggagtgtaaaatcttctgacagtcccacacctactccactactttacaaactttcagtcacagttg acaataaagagtttccgatggaaattgacacgggcagtgctgttaccttgttaagtgctacagatttttctaaactggga gaccacattgaaaccctaaagagcccaactgtgattttgaaaagctacactggcaacattattgagtgcctaggggaaaa ggagatgaaattagagattggagaccagctagacacactgttagtccgtgtggtcaagggtccatccattcttggtcgtg atttgatggctaagttcaaactaccttggcagaatattttccacatggtttcaactacaagtgaagatattgtgtctcag tatccaaatatgttcgacaacacaacagtgggaaaattaaaaggcatccaagtcccattgcgagtgaaagaagccaatcc tgttttcattaaaccaagagtagtgccttttgcaattcgttccaagtacgaagaagctctagagaaacttgtggcagagg acattatcgagaaagtggaacattccgaatgggcctcacctacagtgcctattgtcaagccaaatggtgatttgagaatt tgtggagactactcagtgaccataaataaattttcagtgatggaacaataccccataccaagccttgaggaactgttaag caacttgtcaggaggaacacgttttaccaaaattggtttatctcaggcgtaccatcaactcgagcttacacctgaaagta ggaagtacaccaccatcaacacgcatcaaggtctataccaatacaagcgcctaacgtacggagttacaagcgctgtgtcc atttttcaacgcaccattgaaaatgtgttgaaagaccttccaggttgttgtgttcgtattgacgacatactggtatctgg aggagcagatgaaatccacctggacaatcttcatcgtgtgttacagagactacaggagtgtggactcaagttgaatccca ataaattccattttatgctaaaccaagttgtgtacctaggcacaactatttcagctgagggaatctcacccacaaaagag agggtaaaggctatcagagaggcagaagcaccaactaatgtgccggaactgcagtccttcctgggaagtgcaaacttcct tcgcaaatttgtgccagattttgcaagaattgcctcacccttatagcagttactttgtaaggaaacacgctggaaatggg ggaaactggaacaagaagctttccataacctcaaagcggctctgtgctcagattctgttctacgacactatgatccaact tccaaattgatattacagtgtgacgcctcctctgttggcgtgggagcgactgtacttcaacggggaccagatgattctct actacctgttgcatacgcttcaagaacacttactagtgcagaacagaactactcccaaattgaacgcgagtctctagcta tcgtttttgtagtaaccaaattccgacagtatttgttgggaaggcattttacacttctcacagatcacaagcctttgatc accttaatgggggaacataaacctgtacctcaattggcttcagcccggattaaacggtggtccttgcttctagctgccta taattacacgattgaattcattcctggcaagcaaaatgtgtatgcagatttcctttccagaagacccattgatgctgacc cgtctgatgaggaacaagtgacagtgaatgttatgtttattgaaggagatcagtttgtaaatgcatctattgttgccagt gagacgaagagagattctgttctgagtaaagtattacagtttacacagcatggttggcctgagaaaccagaaccagtgtt tcaaccctatcataacaagagattggaacttactcaggaggatggaattcttctgtggaattctcgagtgatagtaccag aggtactgcgcaccctgttattgaaagatcttcacgctcaacacttgggaatggtaaaaatgaaacaactggcgaggaga tacctgtggtggccaggactagacaaagaaatcgaagaaacggtaaagctatgccattcttgtcaagaagcagccaaagc tccaccagcaccaaacccggcatcgtggtcatggcccggcggaccgtggaaaagattgcatcttgattttgctggtccat acttatcaaagatgttcctagtgatagtagatggctactccaaatttgttgaggttgtgccaatggggcaagctactaca accaatactatcgctgctttaagacgtgttttcagttatttcggtttacccgaacatctagtcaccgacaatggcagtca gtttacaagtgcggagtttcagaattttttaaaggagaatgacatcgaacatgcattgacagcgccagggcatcctgcta caaacggactttcggaacgctatgtcggagaattcaaagataaactaaacaaaattggagacacgggggagactgtccag acgaaactagacaggttcttactaacacacagggctacacctacatccttgggaaaatcaccttctgaattattgatgaa tcgacaacctcgaatcagattcagtgctttaagatttaagacgagcaagcaaaaagttaaggttttccaacataacctag ataacaagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngactcatccctgccgaccagtgtatcgatcgagaggttgaacaac agaagtctgatgttttggggagttctcagactttattagacgacgtgcctacctcaacaccatacctaaatacacccatt gagacagaatgggaaaacatcacttcgatcccgaacgcgtcaacgttgaagtcagttcctgaagttgtggagaaggttcc tgattcagctccacctccatcaagtcctaacccgcccaaaccgaaaaaggaggagcggagatatcctctcagggacagaa aacctccggagcgattctattgaacagtttcagtttcgttacgagttgttgtagttttctttcaaaagggggcatttgtc atgtcttgataattgtttatatgcgagggcccaaagaatgatgggaagtgatcgtgaaagaccatgtgattgtgtgtact ccgggattccgccatattggcatacacgttattaaagattgagttttcac |
Protein
Protein ID | aug_v2a.05925.t1 |
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Definition | - |
>aug_v2a.05925.t1 MSQPLQAQFGILEPLDGVDFTDYSERLNSYFVANNIGQVTADASDTAKREADKKKVAVTISLIGKQTYSTLKDLCLPNLP AEKTYDQLTEILKGYYKPKILEVAESYRFHHTLQSENETVTEYANKLKRLAVNCNFGTYLTRALRDQFVGGVKSQATKKK LLSEDRTFEQALKKKGHIAKVCFKKKKEGSCHTTHLVTATATQEVNTNEGHGDTPDRFTLYMRSVKSSDSPTPTPLLYKL SVTVDNKEFPMEIDTGSAVTLLSATDFSKLGDHIETLKSPTVILKSYTGNIIECLGEKEMKLEIGDQLDTLLVRVVKGPS ILGRDLMAKFKLPWQNIFHMVSTTSEDIVSQYPNMFDNTTVGKLKGIQVPLRVKEANPVFIKPRVVPFAIRSKYEEALEK LVAEDIIEKVEHSEWASPTVPIVKPNGDLRICGDYSVTINKFSVMEQYPIPSLEELLSNLSGGTRFTKIGLSQAYHQLEL TPESRKYTTINTHQGLYQYKRLTYGVTSAVSIFQRTIENVLKDLPGCCVRIDDILVSGGADEIHLDNLHRVLQRLQECGL KLNPNKFHFMLNQVVYLGTTISAEGISPTKERCDASSVGVGATVLQRGPDDSLLPVAYASRTLTSAEQNYSQIERESLAI VFVVTKFRQYLLGRHFTLLTDHKPLITLMGEHKPVPQLASARIKRWSLLLAAYNYTIEFIPGKQNVYADFLSRRPIDADP SDEEQVTVNVMFIEGDQFVNASIVASETKRDSVLSKVLQFTQHGWPEKPEPVFQPYHNKRLELTQEDGILLWNSRVIVPE VLRTLLLKDLHAQHLGMVKMKQLARRYLWWPGLDKEIEETVKLCHSCQEAAKAPPAPNPASWSWPGGPWKRLHLDFAGPY LSKMFLVIVDGYSKFVEVVPMGQATTTNTIAALRRVFSYFGLPEHLVTDNGSQFTSAEFQNFLKENDIEHALTAPGHPAT NGLSERYVGEFKDKLNKIGDTGETVQTKLDRFLLTHRATPTSLGKSPSELLMNRQPRIRFSALRFKTSKQKVKCIDREVE QQKSDVLGSSQTLLDDVPTSTPYLNTPIETEWENITSIPNASTLKSVPEVVEKVPDSAPPPSSPNPPKPKKEERRYPLRD RKPPERFY* |