Gene
Gene Model ID | aug_v2a.05965 |
---|---|
Locus | scaf2191 : 59296 ... 62662 : + |
To GenomeBrowser | scaf2191:59296..62662 |
Genes list of scaffold | scaf2191 |
Manual annotation
Study field | Retrovirus |
---|---|
Gene name | Adi-Retrovirus-related 53-4 |
Description | DNA sequence of this gene model showed similarity with that of Adi-Retrovirus-related 53-1. This gene model contains BTB, Skp1, BACK, and Kelch_1 domains. |
mRNA evidence |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.05965.t1 | gi|620958969|ref|XP_007664546.1| | PREDICTED: actin-binding protein IPP isoform X2 [Ornithorhynchus anatinus] | 7.0e-38 |
Transcript
Transcript ID | aug_v2a.05965.t1 |
---|---|
Definition | - |
>aug_v2a.05965.t1 tgtgttctgcgtgtttggtcctgtttgagtagcaacatggttacccgttctgagatgctcttgtcgaaatgcgctcagtt ccgtcagcaaggtgaattcatcgatgttcgtttaaaagttggagaggacgagtttgcggctcatcgtattgttcttgctg caaatagcgattatttccacgccatgtttgcacgcggaatgaaagaatccaaccaggaagtgatcgagctcaaagatgaa aacatttctgctgctgctatgaagatagtgatggattccatctacagtggagagatcaatgtgaatgatgaaaatgtttt tgaagtattgacagctgcagatcgtcttcaagttacaagtgttgtgcaacaatgctgtaaataccttgagaccgaggtcg ttgagatgaagtttgatgtgcagacgtactgccgcgtcatcttggttgctaatctacttggtttggaagacttgaaagag gctacgcaaagaaaaatggcgtcagtgtacagggaaatttgtgagaaggaggagtttttgtctgatatgaatgcagattc attatcagctcttctctgtcgagatgacctcagagctccatcggagaacttcgtcttcaagtcagtggtgcagtggatca agtacaggaaggaagaaaggatggatgtggcagctcaagttatcggagctgttcgtttgggactggtggacatcaaggat gtgatcgaggaactcgatactgaggaaatgcaagcgatcccagaaatacacatgttgttacacagaacagtagtacacaa ttgcaggccttcgagcagttccgcgtttgcgttggaaaaagcgagaccgagatctatgagcccggtaggagagagcgtct ttcttactctgttatttactttgcacaaaaatctcctttggttaggctttggtttagggttagacacgttatgcccgaaa tttgaccattatgctttatagcgtgacccttaaaatcgtacgagcctgtttctcggaagtcccgaaaacttttcggcccc ggaaagccagttgtcaaactgcaatccgcttgttttgaaaagctgatctctgaatatgtttataatgcaagaaaaaccaa caggactgcgaagtttgatggcttagaacctcggcgttgcgaagatgtaaagggaattgttgcacccgaaataggcccga caagtttcgggacttttgagaaacaggccccccagctgggccgatcaactcgaaacttcaaaatccccggcatttgaact tttaaaaattggatcgttcaaattcccgcctcttcgggccaatatagtgttcaaatgcccaaccttttcgtcggatttgt ctgtcaaatgcctctcctaaagaacaaaagtcatcacctccaggcgtctttaataaagcttcagtatgaacacgtcaaca gatgtcttgtgaccccttatatgatgatgccttttttacctgacttaatttactacaaaaacacaactttaattttcaaa ctattaaaaatcaacttaatatgtgaattaattaagttggacagtgtcaataagcaactgtaagctgctctaactccgaa acaccacaaaggttgtttagcgaaggtactgtatacatatcaacaacagagcctagagattttatgactgactgtatttt ttaaaattgttcagtgttggttgattacctttaacagttaggtttaatatttcatgaataatctttaccccctggcccag caatgacacctgaggagctacaggagttcaataattcatgatgtttgcgctacaaaaaaaaactgatgttgatggtgtca atcatcgccttgtgaggatggttaattgtggaatgttatgatgtcatcagcattgtattagcttcgtactagaatcatgc aatcaatcataatctcttgtaatagcggtcaagctaatttcgttcccctagtcaattccctcccacccttagggtgcggg agttatattgtcatcagctctgttattttgttgtgtttagtctgacaataaactccttgtctgtggacagtaaactcgta gtctgtggtaaaaattcaaacaattatcattatattttgcaggtacttgttgccatttttcacaatggtgtcatcaatta ctttgatgtccagtctaaaacatggaaagagttgtcaacaatgcagccactaacaccggttcaagaatgttattgtgctg aactcattggtaattatttgtatgttgcagcacaaagcaactccaagtttgttctttgttgttatgacatagttcaggat acttggagcacacttcaagcatttacacctcacatgccaggtattcagattggctccttgtgccacattgaagaacatct ctatgtcatttacaagtcttctgcaccttacagatataacatagctacaaatcaatggcaatctattgctagcccaaatg ctgtttgtgatctgggacaagtaacattttgtaacaaagcagctgctgtgtacaaatcttgcctttatgtattgtatgct caaggaattgagcagatgggaaactcagggtatgtctctatgccatataattctcttctatattgttttgacccagagaa aaatgtttgggaacagaaggcatcaaccaaaacaccacactttgggtccagtcttgtggtagtaaaccataacctctatg ttgttggcggggattgctcattcattccacaaagctttcaactttctggaagtccagctgctgttgaagtgtacaatgac caagaaaatgtatggtctgttgtaaaacaaatgcacattccaccaaacaaccttagagctgtagaaattgatggaagggt atatttcataatcaactcttttgtaattgacagtggtatcacaatcccaccaggggaggtctatcctgctgttctggatg ggtgggaaaacttaggaatggttgtcagaaatgcagttttgtgctatgttcctgtaaaaacagagaatcacacaatagaa attgaataaggtgagctgaaaagttgtcggaagcatgattaaggccctaatggcatcattttcaatattgccgatttcac agtttataccttacctttttttttcttcctagtaggcctgtgcaaggtacctataactattcaatttttttcatttagta tagttaacacaacacataaaggattgtcaaacccccaattatttaagtcttcaaatattcagaactagaaaaatgcttat gatgtcacttctggtgacgtcatttgtccaaaagtacaagttgactccaaataacatatatctgccaaataaacagttca tatttag |
Protein
Protein ID | aug_v2a.05965.t1 |
---|---|
Definition | - |
>aug_v2a.05965.t1 MVTRSEMLLSKCAQFRQQGEFIDVRLKVGEDEFAAHRIVLAANSDYFHAMFARGMKESNQEVIELKDENISAAAMKIVMD SIYSGEINVNDENVFEVLTAADRLQVTSVVQQCCKYLETEVVEMKFDVQTYCRVILVANLLGLEDLKEATQRKMASVYRE ICEKEEFLSDMNADSLSALLCRDDLRAPSENFVFKSVVQWIKYRKEERMDVAAQVIGAVRLGLVDIKDVIEELDTEEMQA IPEIHMLLHRTVVHNCRPSSSSAFALEKARPRSMSPVLVAIFHNGVINYFDVQSKTWKELSTMQPLTPVQECYCAELIEK NVWEQKASTKTPHFGSSLVVVNHNLYVVGGDCSFIPQSFQLSGSPAAVEVYNDQENVWSVVKQMHIPPNNLRAVEIDGRV YFIINSFVIDSGITIPPGEVYPAVLDGWENLGMVVRNAVLCYVPVKTENHTIEIE* |