Gene
| Gene Model ID | aug_v2a.06014 |
|---|---|
| Locus | scaf2211 : 34070 ... 44595 : - |
| To GenomeBrowser | scaf2211:34070..44595 |
| Genes list of scaffold | scaf2211 |
Manual annotation
| Study field | Cytoskelton |
|---|---|
| Gene name | Actin Domain Containing Gene8 |
| Description | This gene model shows homology with Homo sapiens actin-like 6A. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| actin-like protein 6a | GO:0003677 GO:0016568 GO:0031981 GO:0044699 GO:0070603 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.06014.t1 | gi|706139709|ref|XP_010202825.1| | PREDICTED: LOW QUALITY PROTEIN: actin-like protein 6A [Colius striatus] | 0.0 |
| aug_v2a.06014.t1 | gi|704515972|ref|XP_010081827.1| | PREDICTED: actin-like protein 6A [Pterocles gutturalis] | 0.0 |
| aug_v2a.06014.t1 | gi|156408816|ref|XP_001642052.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.06014.t1 | gi|525007309|ref|XP_005051313.1| | PREDICTED: actin-like protein 6A [Ficedula albicollis] | 0.0 |
| aug_v2a.06014.t1 | gi|543254491|ref|XP_005419077.1| | PREDICTED: actin-like protein 6A [Geospiza fortis] | 0.0 |
Transcript
| Transcript ID | aug_v2a.06014.t1 |
|---|---|
| Definition | - |
>aug_v2a.06014.t1 tttatgattgatatttcaagttaagtcatttatctgtgatcatctcctagaaacacaggatacagtgagtttgccttcag tgaattctttgatgcaatgctgtgctcttttcttgcagtatgatgttcctacatttgtgggaactttggatgaaggaact aaggatgagattatgcaaactgatgttccttctgaaggtataatataatgtgattaaatgcaatttagcctagttaacag caaagagatgctggttttctgtgcattggggtccatgatggaggggtttccttatcagtcagcagtctcagccattcatg cacaggttcacgaaggtcatgcaggcctcagagtactggctacagtcgaaccttgattatccggacctcgattatgtgga tttctcgattatctggactctttctctggtcccaatttggtcatgaatatttattggtcacgatcaagatccgtagccat atcctttttaaaactacagtacatcattgaaaggtgccgtcaaatgcgaggtttttttgctctcaaagagcaaaagcagc actcacgcttgtcgtagctgatgaagaacattctaatgagttctgattggctcagagttgcgttgttgctaagtgaaatt taacactctatggcatggaaaacaaagaagctggcgttacaaacgtttattcatgatcgtcagtgcaagcgatccgttct ttccataaaagataaaaatgaagatgcagacgacattgtattccaagtgatttgaaaaagtgtttctttaacgattaaat gttgttttcttaatttaatcagttttgctcggttttgctcttcattaatattcatattttcggttatttggacccttgat tatccagactatttcgtgtggtccgaatgagtccagataattgaggttcattaattgaggttcattaatttctctaactt aatggtttagttttattcatttatttattgatttttttttttgacagaaaaacccaaacttcctgagaaaaaatacttca tcgatacaaatagtattcaccttccaaaagaaaacatggaaatcataaatccagtaaaggatggaatgagtaagtcaaga tgacattttttgtgactttctttatcgaaaatggttcaattaccaaggagtaatgtaattcatttcgtcagatggaatct gattgttctgtcaatgcaatgttttgagataggctattgatggtcattggcaatttgataatcctagtaaaactatgtag acctgttaaggatcgtcagtaaacacacgccacgttaggtagaattacttttaatgatatcacgtgatacaggttcacac tgtgtgcataggatactacaagaccctttgagagttgtgtacagtgagaatgtgttggatcataagtacataaatatgta gtactcaaactgttgttactaatggctcctttgtttatattgtagcaaaatgatgttctttctgttgttttgttgtatag ttgaggactgggacacatttgagaagattttggattacatttatgctaaggacatcaaatccgagtcatctctgcaccct gtcctgatgtcagaggcttctgtaagtatttgcaattattattgcagcgcaaagtataccatcataaacagttttaacca ggagggagataccttgacacaatcagatcatttggatttatgaggttgtgtgacttgggcatttacgtttcagtgactnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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tttcatttctacttttaactgaaccattgggtagatatcgtattaatgataataataaaaatannnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngattgtttgtagattttggtattttgatgtgattgttttgggt cagagagatatggcattaattttgtgtaaatattaactgcatttccaatagttttaactaaccgtagggcggtttgtcaa atgccgggtatgtaggacagtaaattaatgagggtatattgatgtgaatgttccagttagcttggaattaataatgatta gattccataacaacaaccacttgtgagttggcttgattatatcctgcaaaatgttgtgcattgtatgtgaaaaaaggtct ttaaaaataatattttaaagacgttttttttttacatacaattatatagtcaacagaatagtacataaagcttgcccatc cgctagttaaagtttttcttttatccattactatattcaatgagagagtaaaatgcttttagcttctgttttgctgacgt gtaaaaatattgaattgttataataatacactgtaatttggcaaaatagatacagtaacatacctaaatgttaaaaggta atggaaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngtat ctaacctcaatttggaccgtaccaactttaccatcattacgtaccggatacagaaccatgtttttacttttggcttgcag tgcgctggagagtattccaggagtagtttatgaatttcccaatggctataacgacatttttggtgtggagagatttaaga tttgtgaaggactttttgacccttctaacgtaaaggtgagtggattactgtattactgttgggtgtagagtgctactgta aaagatgaaaagaaaatcagtcgtgtttcacatccttaccccacacctgccaaccctcagagtacaaaaatttggagaca tcttcagatctttgcattgtaggcatgccattttcgacaaagtctgaatactccccgaaaatcacctgcagctgactgcg catatcaaactttgggtttgaaattgtcttaacaataagctggacgaggaaaagtctagattgtaatggcggggcgtcct ttcggtttggcgacactgttccgtgccctcccccgtgcgccgtttgtcgtctctcaataatgaggatacattaatgccta aggattctaccctaaggtgaaaatttgttcgaccgaaaatttctcgtctacactcgacgcttgccgagctcgattttgaa tatccgacaatcaaatccctgagggcacccaacaatagcgctattgtcctaaaaaattcaaaccataacaataggcaaag tttgataagtgcctgttgcccagtgatgaagcacagggttcttgcgcagaaggtcttaaaataactgagaagaaagtgct gcctttgtaattacacccgtaactggttggacttgagtcttctcggataacgactataaacgtgaagtcccgtctcacaa ttccttcgactctcaactctgtgggacgttaaagaacccacacacttgtcgaaaagcgtagggcacatttagttctcggt gttgtggctgccctcttcagcaaggaggccggctcgaagtatacctgtaaaaggctaggggtgtttgaggctaccaaatt tgtgaacagcccttagtcaagccgaagactgaggcaaataattgatctgcgagacactgacaaattaggatatttacagg ttaacgcactcggcgagtgaattatcgggatttacctgcacgagttcaccaacaatgaacgagaaatttcaataccgcac gaggccgccgattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngaaagttgaataataatttggg ataaccgagttcaataattgttttatcattcgttcattgttcttttgttcaactaaagacgtcaaataacctgacagctc gggaaaccgctctgccattttcacacaagagcgtggtttcagctatgcatgagcagaatattatttgcagcaaaacacaa aacacttatttggaggcagttatttgcaggtcaagtggtgggctctcggccaatgaaaaggaacggaaaaaatacatcga atgacaagtgtcatttattggtttgttattgttgtgtcagggcatcgaaggaagcacagctattggcgtgacgcaggttg tcacaacaagcgtggggatgactgacattgatatacgagctgtgagtaaaattattgctaaaacattgcgtgacaactaa ttgtgacgcgcgcatccgccgatatttaagatgttttcgattgacattattccggaataagaaaacgaacttctacttct gaaaattacacctattagaatctgaatactatcagaatacaaagctaaattacggcatcctttttggtcaatgttataga tatttataatccatcaaatattttcgcccgcgcgcgattggtctaaacgcctttgcttctcggaacagataatgtccgcg gacaaatatctaagcatattttcgcgccaaatgaaggctattgtttctatattcttaaatttacccccaaagaataatct ggaggttattgggtttattcttattccagaatagcgtcaatggaacgcacccgcaaacttcataatgtgtcgttggtttt tgtgttttttgtttttaatggattttcggttgttgcaactttgtcgcattttgctgttttgattaaacaaccacttgctt ttttcttgttactgttttgagtatgcaatttatggttattaatcgtttcccttgggaacaagtattctcctgtggagttt tactactgtgacctttcaaaatattctccgtctgataacaagctctagctaaaagaacacttcttgtgccttttcatacg aaacaattcttggttttcacttttgtgatgagacggccatgttggtttggaaacaaatggcaagatgccgctcaagctta aattcattgctaattcatgagcttgggaactggtgccatcgaagcaaggctggtgggagccccgcgaaaataccaggtag agcagggaggttccatggcaaccctgtgagcgggaaccagccctgagagcggccaccaatcaggaccgtccttcagtgga gaaactcaccatacccgatacctaccatgaaccacttcctatcagggaaggactaggcgctgaattggcaaaataggcga ccaaagcagtgatccacaaagctcaactaagcaagcaaactgcaaatgtgatgaccaaagcagtgatccgtccaaggtag tgatcaacaaagatcagcggagcagacagctgcaattatgttgactatagctcacatgcaaagcacatggcaaggcaagc cctagcggccaccccaccgatcacagagaccgttggacgcattggcgcgaggttaacgtagcctaaatgcatttagccat attttgcataataatagaatcaaattcccaaaagactgttttgccaattgttctgtacaccaacatgaccgccgtgacgt cacgtgaaaaccgagaatagatgacgtaccacaaacaatgctcttaatgttgggaatagagagcagctacatatcaaagg gacttgtaaaaatagaggtcttgaacaaccacaagattaccaggccatggtggttctggtctgagcgtttccaatcttta tgatttcactttcagggtctgttcggtagtgtcattgtaactggcggtaatacacttcttcaaggctttattgataggct caatcgcgaacttctgtcaaagacacctcccgtaagtaatatgaagtctgataaggaaatatttagggagtcgaaccgat attactgagaaaatgatttgttggacttttctaaatatggggagaagagttcaatttggcgctgtcaaaacaaagagctg atttgtgtaaccaatcacagcacatgtagagtagtctgaaatgaaaatttggtttatcaacggagttgataatgtaaatt ggccaccgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnncgttagcccttcgtctattcgctctgacgaagggctaacgctcgaaacgtcagcttttcaa tctctgtacggtggccaatttacattatcgactccgttgataaaccaaattttcgtgtatcactctcccaccgacgcagc tccacagtttctatggaaactaatcccctttactcagtctgaaaatgagtcgaccgtaacgtaaagcaatgttttcttag gaaactcaatttcccttttgattgtactgagtatttggcgcgagattcttaagccaattatcatgcgtattaatttcaac atccgcttttccttttattttatttcatttctgtttgttttctatggttttcagagcatgcgtctaaagcttatatcaaa taacacgcccatggagcgaaggtttaatccttggatcggaggctcgattttggcatcgctcgtaagtcttcacttatgtt tagtatgttttggtacttgagcgtttagcatcttgtgtagcaccgggtttcttagttcttaatgtaatgtcctgtagttt taagtcgatttaagcgcgatcactgaaaaaaccaaaagcaaaagtatagtttactgaacatgacatggtcagggtcgtgg ggtgtttaaagaaatgaatgatacttaatgtacgctttttttcaaaataatcagtgatttttgatctgaatttgattttt gcaaatcagccgatgacgtatttattcagtcggtaagtaaataagtggcctgtcatcaagccaattagatcattcattgt gtgggtcagtgagtcctatatgtctggggtcagtcggtcgatttccgttggtcagtcggccttgatcgttcagtcggttg gtcagtaggcattcagtcgattggtccgtcgatgttttttttcggacggtttgttcggtctttggtcggtatttccatcg gtcagtcgatcgtctctcgattggtcagtcgatccatttgtcggacggttagtcagtcgttcggttggtcgttcaattaa tccttctctcgatcagtcaatcggtttgtcgtcaaatcattcatttagtcagccagtctgacagttgggaggttagttag gtagccactgatcaaacggtaatcttgataatcgccgtttgctatattgatttgtagggttcatttcaacaaatgtggat atccaagcaggaatacgaggatcaaggaaagggttcagtggaaagaaagtgtccctagattcctttactatattgaaaaa aaaaaatgccctgttgtgtacaagcgtggtctgttgattttaggcgaaaatgcacgcacttcttcaaactcctagtcgct ttccgtgccacaaacggtggtcattttaacgagactcgtctgcgctttgataaggtcctttagcttcagaaaacgatagc cttacttttactggttatcagggttaaaccgaacgcatgcccagacttctcctttgcgattgcacttcgttacgccatcc tatcgctcggcgctttttgggtccttaataaacgttgtcgaaaaat |
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Protein
| Protein ID | aug_v2a.06014.t1 |
|---|---|
| Definition | - |
>aug_v2a.06014.t1 MQCCALFLQYDVPTFVGTLDEGTKDEIMQTDVPSEEKPKLPEKKYFIDTNSIHLPKENMEIINPVKDGMIEDWDTFEKIL DYIYAKDIKSESSLHPVLMSEASWNVRPKREKLTELMFEKYNIPAFFLCKNAVLTAFANGRSTGLVIDSGATQTSAVPVH DGYVLQQAIVKSPLAGDFITAQCRQMFEEKNVEIAPPYVIATKGGLSNAGALESIPGVVYEFPNGYNDIFGVERFKICEG LFDPSNVKGIEGSTAIGVTQVVTTSVGMTDIDIRAGLFGSVIVTGGNTLLQGFIDRLNRELLSKTPPSMRLKLISNNTPM ERRFNPWIGGSILASLGSFQQMWISKQEYEDQGKGSVERKCP* |
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