Gene
Gene Model ID | aug_v2a.06120 |
---|---|
Locus | scaf2256 : 100826 ... 105478 : + |
To GenomeBrowser | scaf2256:100826..105478 |
Genes list of scaffold | scaf2256 |
Manual annotation
Annotation by Blast2GO
Annotation | GO |
---|---|
e3 ubiquitin-protein ligase rnf168 | GO:0016567 GO:0044710 GO:0044763 GO:0046872 GO:0050896 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.06120.t1 | gi|156383735|ref|XP_001632988.1| | predicted protein [Nematostella vectensis] | 3.0e-25 |
aug_v2a.06120.t1 | gi|551524397|ref|XP_005813682.1| | PREDICTED: E3 ubiquitin-protein ligase RNF168-like [Xiphophorus maculatus] | 3.0e-24 |
aug_v2a.06120.t1 | gi|530633247|ref|XP_005303674.1| | PREDICTED: E3 ubiquitin-protein ligase RNF168 [Chrysemys picta bellii] | 3.0e-22 |
aug_v2a.06120.t1 | gi|591386044|ref|XP_007067445.1| | PREDICTED: E3 ubiquitin-protein ligase RNF168 [Chelonia mydas] | 6.0e-22 |
aug_v2a.06120.t1 | gi|701392647|ref|XP_009995014.1| | PREDICTED: E3 ubiquitin-protein ligase RNF168 [Chaetura pelagica] | 2.0e-21 |
Transcript
Transcript ID | aug_v2a.06120.t1 |
---|---|
Definition | - |
>aug_v2a.06120.t1 atgaactttgtcgaccgtgcttcaagaaaaatgtagaagaagccaattttgtttgtccactttgtcgaatgaggatatca agttgggcgagaagaaacacacgaaagggaactttagtcgacttgaagcgatgggaacagattcaaagactttttcctga aaaatgtcagaagagattacggggagaagacgaggaggatttgtttggtgagcttttgataagatttgaaactcatttta gactttcgttttcgctgtatctatcgacagctgaaggtttttacgaatgaaaagtcgagcaactttaaataaataagctt ttgaagaacgtgactgataagattagtagcttaagttattcgttgatatggaaatgatggccctgtattctataattaat tttagacgcgaattcaaactagaggcaaactactttgagggaaaagggcaaggggtaaactaccttgagaaggggggggg ggggggcgaggcaggaggcaaaccactttgatgggtagggacaaagtggcaaactactttgagagggagggctgagtggg cttgtatatcagaaagagaggattttggtgaggagaaaatcccttggttgaataagttcctttggttgaggaagtcttca tgtcattctgtgaatgacatgaagtagagatctatgaataaaatgcttctcttatcgttataataataaacatggtattt gacatgccgagagaattcttatcatttgattgacggaaagatgcattttgaaatgactatgcatatagttagttactgta aacagacaaggttggaattttatcctaccaatcaaaagaattctgtatgcttttgcctctagcatattcaagttgttact tgtacggtgttaaaatcatggtcatttattttttctaggtaagaaattgaatttcttttgataatttttgcagattttcc tgcaccaaagcgaacaatatccaaggatggagaaattcgcagagagtatgaagaggaaatgagaaaagtatgagattctt tttgtattccaactagagatcattattagaattattatcattattagattaaaaatgatcatctgggtgattggagtcct gagaaggactgttgtttgtcaccaacaacagtccttctcagattttcattttcaatcaaggtatgttactcttgcggtca aaccattttctcatagagatcataatgtctagtgtttgccattttcacttcttttcagatcataaaattgcctttaggtc aaaggcagccaaacgttgctggtggcgattctatcttgtatgagctgacaatggccagaacttattaattaccaccaaaa cagatttaaaagttgacccatcgttctcttttttcagacaagttgctaatgtttgaagcgtcaactttgcaaccttgttc ccagggcctctcctcttcctttcccctctcgctccaggggaagggaagagaagaggccctgggaacaaggttgtcaactt tgtagcctttttattgggaaatttcatgtttatcaactttttttattccaaatttttgtctttcacttgccctccaaccc agcaccacagtttcaaaacaaagtaaacccttaataactgtactaatgagcacagctgatttgtttatatcatgagttat tttcaggtgcagcaagcaagagaacaagagatgaaggcgagtgaggaagctgtccgtcaactacaagaggaagaggagag actggtgcagactttggattttcaggcacgacaagacgaagaactcgcaagaaagattgtttctgaggagattccacagg tacggtactgctcgaaattatagaccattttccacacttttgtctaggtcaaaacacaaatgtcatcggccagttgaaat acaaaaaactacagaaagctggggtttcataatgtctcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttgttg tagaattcacaggagaaagagaaactttcacagacaagtctttcaagaaaatctgtagcaagttcaactgcaagtgtagt aaagagcaaaaagaaaaaccaagccagccatggctgcagcacactggacaagtggttctctccaacacggaacccagcat tcttggataggcagggtattgtaaattattttgtagtgcaggtcaaatggtttcaaccttgtttgataatgtcatttctt cacttgtctctatgatagtaattttacagcaatgaataggcgaatctttgtttacactttttgcttcattaacgtatgct tatcactatcttatgacactaataaaataaaaactctgaatattaaaagggcataatagtttaagttttctcttaaaatt tgagtccaattcattgaatggtttcggagaaattctcttctaaaaagtccaaattttacaggggatgtatggcttattaa cttttttgccacccagcaatttcgcagtttttgatgtctgatatttccttcaatactgcttgcaaagagctgaaaattgc acaaattgctcaacttaatcagctctttcaacttttgcatttagctcatatatacggccactacttagtcttctttttgg taagtcgtatgcaaatgagcaaaaatgtaaacaatgacgtcagcaaagattcgcctataccacacacaaagaaattaatt agaaatcaaactaggaagatatcattttgtgaggcgagcagctcacaaaaacaaatgaagcaagtattaatgaatagggt ctaagagagacaaaatttcttttttgttcgtcctttctatatagtacttaacttgtgaagaccagttagattgacggtgg atataataataattattatgtacaataaatcaactctcttgagctaaattaaggacggtgcctactattgttattgcgca tacattctgcgcatctccagatactcggatttcctatcaccaacgcttactaatacaggggtatttttgcgtggcttaaa actatccgaagaaagtaggtattagtaagtactcttggtatccaaaaaggaaattgggggtaaccatgcatttttgtgaa ataattaagcttcaatttgagaaagaacaccatacattgctttgtatttcaaagctttttacagatattattcatgaatt atctttgaaaaatgcatggttacccccaattttctttttggatttcaataggacttgttaagacctacatttcctatata atcacacgccgaggaaaaatatctttaattagtaggcaccatccttaagcaagaactctagttcctgttgtcacaacaaa gacaaatcatactgtattaaggttggagcaatagtaataataattatttgatgataatacatgtataacatttttatgat tattgatattaggtgtctcgttaccttcatacaggtttgggcaaaaggacagagaacaagacaaataaaagtgaatcttt tttgacgagcacatcaacggacaaagagagattcacttgcatatttaatgatgtagatgatcttcattattctcaagtct ttaatgaaaagaaggaacaagagaatcaagactttcaattggcattaaagctacagaaagagtttgattcaatcgagaag aaagaggcaatggtagacaggaagaaaggaactgtggatgcttatctgttgagaaaaacggataataatagtacgagcac ccaaagtagttcctcaaagcattgaaattgttcacgtttccaagccagatgaagacgatcgaatgacagaccaatttttt cactctgatattttacagtccaatgcaaaaaccaattcttaattttagttggtgatgtttgctctatgtcttatcacaac acaaatcatgttt |
Protein
Protein ID | aug_v2a.06120.t1 |
---|---|
Definition | - |
>aug_v2a.06120.t1 MRISSWARRNTRKGTLVDLKRWEQIQRLFPEKCQKRLRGEDEEDLFDFPAPKRTISKDGEIRREYEEEMRKVQQAREQEM KASEEAVRQLQEEEERLVQTLDFQARQDEELARKIVSEEIPQNSQEKEKLSQTSLSRKSVASSTASVVKSKKKNQASHGC STLDKWFSPTRNPAFLDRQGLGKRTENKTNKSESFLTSTSTDKERFTCIFNDVDDLHYSQVFNEKKEQENQDFQLALKLQ KEFDSIEKKEAMVDRKKGTVDAYLLRKTDNNSTSTQSSSSKH* |