Gene
Gene Model ID | aug_v2a.06570 |
---|---|
Locus | scaf2438 : 43555 ... 44235 : - |
To GenomeBrowser | scaf2438:43555..44235 |
Genes list of scaffold | scaf2438 |
Manual annotation
Study field | Transcription Factor |
---|---|
Gene name | Adi-SCL1 |
Description | Named thus based on a BLASTP result against NCBI nr and molecular phylogenetic analyses (NJ and ML). |
mRNA evidence |
Annotation by Blast2GO
Annotation | GO |
---|---|
protein lyl-1 isoform x1 | GO:0001955 GO:0003677 GO:0030183 GO:0045893 GO:0046983 GO:0060216 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
aug_v2a.06570.t1 | gi|156398560|ref|XP_001638256.1| | predicted protein [Nematostella vectensis] | 2.0e-30 |
aug_v2a.06570.t1 | gi|589967563|ref|XP_006996284.1| | PREDICTED: protein lyl-1 isoform X1 [Peromyscus maniculatus bairdii] | 3.0e-26 |
aug_v2a.06570.t1 | gi|557260343|ref|XP_006015815.1| | PREDICTED: T-cell acute lymphocytic leukemia protein 1 homolog isoform X2 [Alligator sinensis] | 8.0e-26 |
aug_v2a.06570.t1 | gi|568956284|ref|XP_006530808.1| | PREDICTED: protein lyl-1 isoform X2 [Mus musculus] | 2.0e-25 |
aug_v2a.06570.t1 | gi|532056591|ref|XP_005371003.1| | PREDICTED: protein lyl-1 [Microtus ochrogaster] | 3.0e-25 |
Transcript
Transcript ID | aug_v2a.06570.t1 |
---|---|
Definition | - |
>aug_v2a.06570.t1 acgttgattgcaaatcatttctttggtgagacaatccgacagcgagcgggattggataaaaaaagaggtcattttcgaga tcttggaggtgacgacgcggaaaccaaaggcagaaccattgttcgaaagtgcaggtatggaagttccttctctgtcgcct gtggactctgctagtagttccagtggatcagagacaagtttaagcccaataccatcacctcaagcgttgtattatccatc gcggcgacggatgaatctctcgtaccaaagtgactgccagtcttacatgaaacgactttacacgaacagccgtgagcgat ggcgacaacagcacgttaatcttgcatttggcgaattgagaaagcttttaccaacgtatccacctgagagaaagctctcg aaaaacgagattttaagactggcgatgaggtacatccgatttttggataacttagttaaagacatgagcgaacaagatga caagaatcaagacatttctaacgccaacgtgaaacaggaacaacacgaaattgtacaattgtacgtgtctccccgtgggg gacataaagaaaccgacttttttatagcctaaatactcgctgacatcgaacccattttcgaaatttgtgagtggcttgag ttgtaggagaaagtgtaggtgaagaaaaagactttgcaggt |
Protein
Protein ID | aug_v2a.06570.t1 |
---|---|
Definition | - |
>aug_v2a.06570.t1 MEVPSLSPVDSASSSSGSETSLSPIPSPQALYYPSRRRMNLSYQSDCQSYMKRLYTNSRERWRQQHVNLAFGELRKLLPT YPPERKLSKNEILRLAMRYIRFLDNLVKDMSEQDDKNQDISNANVKQEQHEIVQLYVSPRGGHKETDFFIA* |