Gene
| Gene Model ID | aug_v2a.06898 |
|---|---|
| Locus | scaf2581 : 518 ... 7257 : + |
| To GenomeBrowser | scaf2581:518..7257 |
| Genes list of scaffold | scaf2581 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phd finger protein 10 isoform x1 | GO:0046872 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.06898.t1 | gi|545797209|ref|XP_005659157.1| | PREDICTED: PHD finger protein 10-like isoform X3 [Sus scrofa] | 4.0e-29 |
| aug_v2a.06898.t1 | gi|545797204|ref|XP_003121126.4| | PREDICTED: PHD finger protein 10-like isoform X1 [Sus scrofa] | 4.0e-29 |
Transcript
| Transcript ID | aug_v2a.06898.t1 |
|---|---|
| Definition | - |
>aug_v2a.06898.t1 ccagagcttgagagtcacacagtgactggggaagagaggttgtatctcaaagaaaaggaaattatacagaatgatgaaag tcaaggtataagtagtctgatattagtagtacatcagagactctaattaaactcctttaaacattgtaaaagtccttgac tagcaccatgctttctgattgaacttaccatattcttgattatcgtttctgtttctcctcctcacatctaaggagcgttt cttttgaagtactgtaactttttctttcctaaaaaataccatattttgagttttaaaataaatgccaatattaaaaatta caatttcatcatattgacttgtaaaatttgtactccagaagtataagtgtaaacatgacctgttgtacaacatacattaa actgtccagattacttttcatgttcttagaacttgttgcttttaagacggaagatgtctgtcaaatgatgatcgatggat tcccaacaaaattccaggtacactgcatcatcagtggaaatgtacatttcatcattttctttcttctttaactaatacta tattaatatttatatttcctttgttcttttatcttttcaggagtatcttagagcaactcatataaaagagcgccataggc ttattacaaaagcagaggatgagaaggtgcatgtctaaaaattaatttacattgactctttttagtaattaatttcttgt ccttgcatctgaaaattcttttctttcgaaaaaaaaagatgtccggcttttttgaaagtacagcattttagttgcgcaag ttttgtgataattcaaaagtacaatcaatcctatatttccagaaagcatttgaaaaaagaaaagttgccaaccatataaa aagggccatcaaagatgcagcagagttcaatgcccaattagcacagcaaagaagagaagaaaggtgctcatactttgata tgcagactcaagtaagcttttatataatgtgaaagagaaagtagtcttaataatactccttttcattatgtggggacatg ccaaatagatttgtgccatttagcaaatgttccaaggttatgactgatcatttttgtgatggaacaactgttgcatgttg gggtcatgaaagcttacttgtgacacacgcaataaaccaaactgcaagggagaaaatcagttgtctcattacaatgtgca gacattgaatttgtcacaaattaactgagttggttgtcataggattttaacatccatacaaatataaaaatttataaatc cgctgcaactactgggttgcaccacctttaaatgtcactttctttaactattcagagtggagattctctcatgaaaaatt aaatgctgttgccctacagataattcatgttccatcaaacaagacaacaagattaccaaaacactgctctaagccaagtt tgtacccagtagctcttttgcctggtcaattccaggaatactttaaattgtaagtacattaaatttaatcacttcaacca tattcccattaccagtaaactagtattaatttgatcagtaactgttatgttaaatcatttatcagccattattctgaatc aacaagaaatatgatggctgttttaataattccctttgttaagaagacagttctgaagtggcgtgatgcacaaatagcac acacatgcagggaaacatttttaattttaagttacgcgtacgtttattgcgcgtaatcattcttgcataagtttttttta tatcttttagagagttatgtactgttttgagtttactgttttttaccgagtttgtaggtcgagtaccgttccgatccatt tacctctcatgaacatccttaatattactgattctttttgttatttcactttgataccaaagttcactacacagaaactg agaaaagttcaccggggaaagtttacaaaacaggattgagttagcnnnnnnnnnnnnnnnnnnnnnnngcatgaacagtg cactaacttgatccttgtgcttgtgttcaaaacaaggtatactccagaggaactaaagaaatttcctctgggaactgtga tggaaatgccaacaccacctcagccaccagctccttacatcccaccacaacaagaagcagattcagaggaatcagatgac atctccctaccagtgagttaatagcctcatctaaatgatcaaaccttttcattcatgactaaaactatcacttggctctg aagatgacttcggcacagggttgttgaaatgtcagtcactaacaacagtccttcacaggactccaatcacccagatgaac attttcaatcaaggccttttcatccaattcaatcaatacagaatatgggaataactgtattagaatccatgacactttcg tagaagacaagtgctctcaccatagaaccgacccacactctaaaatgctagcctttcctacgaagttgtatcctcatgta agtatgcattgtgtaattgtctaataataatattactaatttgggatgggaattaaagcttaggtaacaggaatacccat aatcttctaccacggacatggtcctgtgaacatgtggcacaaggcgatttgcacagggaagataattaaataattattag tgttttcaacttgaacaggagtcaacagcagatgagtgcgatgatgagagttcagagaatgaagttgaagaacctcctct aaagaaaacaccaggcaaatacaaggtaagtgtgctattcagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngc aatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngttg tccattaaaatatctaagccccagtttttcacttttgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcttttact gagttggaggaagggaggttgcaagtctcttgactctctacatgtagtatcaatacttccttggcatcaaattacaattt acaggtcacccatcatgtcttgacatgaatctgcagctggtagctgtgatacaaacatacccttggcagtgcatggaatg caaaacttgtatcatttgtagagacccctttgatgaggtatcaacatacagtattttttatgtgatattttttctttggc acatggcaagcattttcctttgcttaaatttgcaaatgtgcattttatgcgttcacaggacaagatgttattttgtgatg agtgtgaccgtggataccatagtttctgtgttgggctcaagcaaattccagttggtaagtttcaataaaacaaaatactg catgctgggatggactcagcacactcagttatcacacagggaatccacatgaattattgttgacacattttctttcctac tgcattaaacatcttgcacaaaagacagtgaagcatacataatgtgaaaacttaattgnnnnnnnnnnnnnnnnnnnnnn gggagatcaaagataaaacccttttctcagagacatttgctgtatctttgaaagatttgaatagccacttgcatgcactt gagggggatgcattgttaagagtgaacattgttttttcaatcatgcagggcgttggacttgcgacatgtgtggaatgtgt gcatcatgtttgaggagatcaccaggcgaagggtccacatcacgatggaagcatgaggtttgaaactagttattgtgttg agtctgtgtatgttttgtttacaactttttaaagtatgtgccatatgcaataaaaaatgtgcagtcccaaagaatgtaac cgtgcaagttttcaatttcaaagtgtttgcctatttgcaggattccttgggaatcagttaagtaaacatctgtttagttg ttgttactttttgtgtgtgtgtgttacaccagcttcttcccaatcccataatactagatgttccaaggtaaaggcaaatc atnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnttttcatagttacagtacattttaatgttaaaccagttataatgacatccctgtgtcataagatatgaattgcgt agtggttactgattatgataatttatatgaaccaggaaaagtgtttgattatgttaaagctgggaaatcagtaatgaaat aggcaatgaaattttctgtaacaattttgtctgtttgtagattgttcaggactgggaatttttgccctgtttgtttaaaa gtatatcgaaatgatgaatcagacttacccatggtttgttgtgacatgtgcgatcgttgggttcacacaggtttggctta aattttgtttttttttttcaataaatttgaccacaatgatttctgtgattccttttaaaataatattttctcaaaacatc cttgtatagtgtggtaaaagtgcttcgtagatgtagaagagttgtgtcgtgtgttactcatgaatgatcataggtcatgc agttagggtattagtacattgcattgtaataattattgaacccatgtgctagttgttagaataaacacctggaaagtttc cttaaaccatgtgctgtggttttctatggcttccactgcttcatagacaaataataataatattattgttcactctttag gatttcacccacagattcaaaagttaaaatcacatgactttgtacataatgaagagcacataatgaatggtcacacttcc atgtgtttgtttacagtaactattgctaataggtgcctgattcttcccctctttatgttaccttaaacagctatttctcc ttttcaaattaatttcatgtaaataacaaggcaagttgtgagaacaaaatgatagattttattattgttgtcaattgaaa cacccgttatcagttatgctcttaatatgttgcagggaagtttctttttttctatataggctggtgctgatcattagcaa taatattattttgacattaaattttactttaccagactgtgatggcatcaacgagaaggaatatgcccaacttgcaaaga ctaaaaccaagtacagctgtgtgttgtgtcgaggggagaaagatgaaagaatggattcatttcacaggaagaatagaaac aagacaagttaggctacttcttgccttgcctttttcatgaacatggagtttgctccttttaacatctactacatgttgta aaaaaataatgaaatcaatt |
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Protein
| Protein ID | aug_v2a.06898.t1 |
|---|---|
| Definition | - |
>aug_v2a.06898.t1 MMIDGFPTKFQEYLRATHIKERHRLITKAEDEKKAFEKRKVANHIKRAIKDAAEFNAQLAQQRREERCSYFDMQTQIIHV PSNKTTRLPKHCSKPSLYPVALLPGQFQEYFKLYTPEELKKFPLGTVMEMPTPPQPPAPYIPPQQEADSEESDDISLPES TADECDDESSENEVEEPPLKKTPGKYKRPL* |
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